prot_Ecto-sp13_S_contig5653.16002.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5653.16002.1
Unique Nameprot_Ecto-sp13_S_contig5653.16002.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length342
Homology
BLAST of mRNA_Ecto-sp13_S_contig5653.16002.1 vs. uniprot
Match: D7FKB8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKB8_ECTSI)

HSP 1 Score: 635 bits (1639), Expect = 3.280e-228
Identity = 315/342 (92.11%), Postives = 319/342 (93.27%), Query Frame = 0
Query:    1 MAPKNSPPSKGKEAVKDLKTSASPIAVAQEQVAHTFGKLTDVIQELQDAVEKERVAVDTDKLNKPGHGAHNFGQPILPLGELKDIIDDTMTNALYAFIDKFTQFPKAAGIPQLLLPRLFLECFNDVQEHYRQFIEPILFPNGSKTNSALLRDHLSNNCHELFLLTPSEKRDRTVQHILGNIGEHLRTQRTFADNELNWVINETGLDVLVHKYREIMVHVRLQPTPATFSTDCGMLLEVVKKKTWSLTAQQPAAAGVQPFDPKRHSPSVDAMGTSEGALCVVVFPAMEVDGARCTISYTLCLDRHQAKLVAAPGQNPTRQPLNQVDVHIMPVRDQLDIWNSTP 342
            MAPKNSPPSKGKEAVKDLK SASPIAVAQ QVAHTFGKLTDVIQELQDAVEKERVAVDTDKLNKPGHGAHNFGQPILPLG+LKD IDDTMTN LYAFIDKF QFPK AGIPQLLLPRLFLECFNDVQEHYRQFIEPILFPNGSKT+ ALLRDHLSNN  ELFLLTPSEKRDRTVQHILGNIG HLRTQRTFADN LNWVINETGLD LVHKYREIMVHVRLQPTPATFSTDCGM LEVVKKK WSLT QQP AAGVQPFDPKRHS SVDAMGTSEG LCVVVFPAMEVDG RC ISYTL LDRHQA+LVA PGQNPTRQP NQVDVHIMPVRDQLD+WNSTP
Sbjct:    1 MAPKNSPPSKGKEAVKDLKASASPIAVAQAQVAHTFGKLTDVIQELQDAVEKERVAVDTDKLNKPGHGAHNFGQPILPLGDLKDRIDDTMTNTLYAFIDKFNQFPKTAGIPQLLLPRLFLECFNDVQEHYRQFIEPILFPNGSKTDPALLRDHLSNNYQELFLLTPSEKRDRTVQHILGNIGGHLRTQRTFADNGLNWVINETGLDALVHKYREIMVHVRLQPTPATFSTDCGMFLEVVKKKPWSLTVQQPTAAGVQPFDPKRHSSSVDAMGTSEGDLCVVVFPAMEVDGVRCNISYTLSLDRHQAELVATPGQNPTRQPPNQVDVHIMPVRDQLDVWNSTP 342          
BLAST of mRNA_Ecto-sp13_S_contig5653.16002.1 vs. uniprot
Match: A0A6H5KQQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ4_9PHAE)

HSP 1 Score: 502 bits (1293), Expect = 4.410e-177
Identity = 256/292 (87.67%), Postives = 262/292 (89.73%), Query Frame = 0
Query:    1 MAPKNSPPSKGKEAVKDLKTSASPIAVAQEQVAHTFGKLTDVIQELQDAVEKERVAVDTDKLNKPGHGAHNFGQPILPLGELKDIIDDTMTNALYAFIDKFTQFPKAAGIPQLLLPRLFLECFNDVQEHYRQFIEPILFPNGSKTNSALLRDHLSNNCHELFLLTPSEKRDRTVQHILGNIGEHLRTQRTFADNELNWVINETGLDVLVHKYREIMVHVRLQPTPATFSTDCGMLLEVVKKKTWSLTAQQPAAAGVQPFDPKRHSPSVDAMGTSEGALCVVVFPAMEVDGAR 292
            MAPKNSPPSKGKEAVKDLK SASPIAVAQ QVA TFGKLTDVIQELQDAVEKERVAVDTDKLNKPGHGAHNFGQPILPLG+LK  IDDTMTNALYAFIDKF QFPKAAGIPQLLLPRLFLECFNDVQEHYRQFIEPILFPNGSKTN ALLRDHLSNN  ELFLLTPSEKR+RTVQ ILGNIG HLRTQR FADN+LNWVINETGLD LV KYREIMVHVRLQPTP TFS DCGM LEVVKK  +   ++ P AAGVQPFDPK HS SVDAMGT EG LCVVVFP MEV GAR
Sbjct:    1 MAPKNSPPSKGKEAVKDLKASASPIAVAQAQVAQTFGKLTDVIQELQDAVEKERVAVDTDKLNKPGHGAHNFGQPILPLGDLKGRIDDTMTNALYAFIDKFNQFPKAAGIPQLLLPRLFLECFNDVQEHYRQFIEPILFPNGSKTNPALLRDHLSNNYQELFLLTPSEKRNRTVQQILGNIGGHLRTQRPFADNDLNWVINETGLDALVLKYREIMVHVRLQPTPTTFSADCGMFLEVVKKNKF-FNSKAPTAAGVQPFDPKHHSSSVDAMGTIEGDLCVVVFPGMEVGGAR 291          
BLAST of mRNA_Ecto-sp13_S_contig5653.16002.1 vs. uniprot
Match: A0A6H5JWR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR0_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 3.620e-5
Identity = 36/90 (40.00%), Postives = 41/90 (45.56%), Query Frame = 0
Query:  211 KYREIMVHVRLQPTPATFST-DCGMLLEVVKKKTWSLTAQQPAAAGVQPFDPKRHSPSVDAMGTSEGALCVVVFPAMEVDGARCTISYTL 299
            +Y  IMV+VRLQ  P TFST DCG                      VQ FDP  HS  V   G   G  C+ VFPA+      CT+ YTL
Sbjct:    4 QYMVIMVNVRLQYPPVTFSTTDCGK---------------------VQQFDPDLHS-DVGGEGVRRGQECITVFPAIMTGEKICTVGYTL 71          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5653.16002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FKB8_ECTSI3.280e-22892.11Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KQQ4_9PHAE4.410e-17787.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWR0_9PHAE3.620e-540.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5653contigEcto-sp13_S_contig5653:3..1753 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5653.16002.1mRNA_Ecto-sp13_S_contig5653.16002.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5653 3..1753 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5653.16002.1 ID=prot_Ecto-sp13_S_contig5653.16002.1|Name=mRNA_Ecto-sp13_S_contig5653.16002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=342bp
MAPKNSPPSKGKEAVKDLKTSASPIAVAQEQVAHTFGKLTDVIQELQDAV
EKERVAVDTDKLNKPGHGAHNFGQPILPLGELKDIIDDTMTNALYAFIDK
FTQFPKAAGIPQLLLPRLFLECFNDVQEHYRQFIEPILFPNGSKTNSALL
RDHLSNNCHELFLLTPSEKRDRTVQHILGNIGEHLRTQRTFADNELNWVI
NETGLDVLVHKYREIMVHVRLQPTPATFSTDCGMLLEVVKKKTWSLTAQQ
PAAAGVQPFDPKRHSPSVDAMGTSEGALCVVVFPAMEVDGARCTISYTLC
LDRHQAKLVAAPGQNPTRQPLNQVDVHIMPVRDQLDIWNSTP
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