prot_Ecto-sp13_S_contig11875.1599.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11875.1599.1
Unique Nameprot_Ecto-sp13_S_contig11875.1599.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length347
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11875.1599.1 vs. uniprot
Match: D7FP63_ECTSI (PsbB mRNA maturation factor Mbb1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP63_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 7.750e-119
Identity = 188/195 (96.41%), Postives = 191/195 (97.95%), Query Frame = 0 
Query:    1 IVPQKSPSAGSAAASNKTELSAKVEAELFEEYDAMVPGPAASAVGNNAGGDITGQERTGRPLKINLDLLSYQAKQKNIKGDYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGLENCADNPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPEHTASWVALGLLNERNKRIDEARGCFQTAT 195
            I+ QKSP AGSAAASNKTELSAKVEAELFEEYDAMVPGPAASAVGNNAGGD  GQERTGRPLKINLDLLSYQAKQKN+KG+YREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGLENCADNPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPEHTASWVALGLLNERNKRIDEARGCFQTAT
Sbjct:  279 ILSQKSPPAGSAAASNKTELSAKVEAELFEEYDAMVPGPAASAVGNNAGGDGAGQERTGRPLKINLDLLSYQAKQKNMKGNYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGLENCADNPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPEHTASWVALGLLNERNKRIDEARGCFQTAT 473
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BLAST of mRNA_Ecto-sp13_S_contig11875.1599.1 vs. uniprot
Match: A0A7S4DG14_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG14_HETAK)

HSP 1 Score: 144 bits (364), Expect = 2.900e-36
Identity = 80/179 (44.69%), Postives = 105/179 (58.66%), Query Frame = 0 
Query:   16 NKTELSAKVEAELFEEYDAMVPGPAASAVGNNAGGDITGQERTGRPLKINLDLLSYQAKQKNIKGDYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGLENCADNPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPEHTASWVALGLLNERNKRIDEARGCFQTA 194
            N T LS KV +EL   YD  VPGP  S             +   R L INLDL++Y A+Q  IKGD     R+Y+ C+ELDPRDGR WL LAR   +  +++ A++LF  GL     NPYLLQA+ VMEEQRGN  KAL L +++    P+H AS+VA   L +   ++ EAR   ++A
Sbjct:  114 NSTTLSKKVYSELMSTYDEQVPGPDPS-------------KPPARALPINLDLMTYHARQAMIKGDEAVGLRIYKKCLELDPRDGRAWLALARHESRRKRFEVAEKLFLKGLTYSRGNPYLLQAYGVMEEQRGNSVKALELYSKATLADPKHAASYVAKAKLLQGVGKVQEARRALKSA 279
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BLAST of mRNA_Ecto-sp13_S_contig11875.1599.1 vs. uniprot
Match: A0A835Z1N5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N5_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.120e-32
Identity = 75/128 (58.59%), Postives = 85/128 (66.41%), Query Frame = 0 
Query:   18 TELSAKVEAELFEEYDAMVPGPAASAVGNNAGGDITGQERTGRPLKINLDLLSYQAKQKNIKGDYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGLENCADNPYLLQAFAVMEE 145
            TELS KVEAEL  +YD +VPGP            + GQ    RPL INLDLLSY+AKQ  I GD  EA RLY+ CVELDPRDGRGW+GLAR   K     +A+ L+E GL N  DNPYLLQA+ VMEE
Sbjct:    1 TELSLKVEAELLGQYDELVPGP------------MPGQRA--RPLPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNSPDNPYLLQAYGVMEE 114
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BLAST of mRNA_Ecto-sp13_S_contig11875.1599.1 vs. uniprot
Match: A0A7S3B3F3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B3F3_9EUKA)

HSP 1 Score: 122 bits (306), Expect = 1.440e-29
Identity = 59/140 (42.14%), Postives = 93/140 (66.43%), Query Frame = 0 
Query:   55 QERTGRPLKINLDLLSYQAKQKNIKGDYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGLENCADNPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPEHTASWVALGLLNERNKRIDEARGCFQTA 194
            +E   RPL+INLDLL+++A+    +GD + A   Y+ C++L+P+DGR WLGL++  ++  + ++A RL + GL     NPYLLQA+  ++E+RG Q +AL   +R+V+  P H ASWVA GLL  + +R+D +  C + A
Sbjct:   60 KEEGSRPLRINLDLLTHRARVLVQRGDRKGAAATYKRCMQLEPQDGRAWLGLSQLRRRQGREEEAARLLQGGLRVDPANPYLLQAWGTLQERRGFQDEALASYSRAVKAQPRHAASWVACGLLLAKRRRLDASAQCLRIA 199
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BLAST of mRNA_Ecto-sp13_S_contig11875.1599.1 vs. uniprot
Match: A0A7S2XUS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS2_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.430e-26
Identity = 64/189 (33.86%), Postives = 98/189 (51.85%), Query Frame = 0 
Query:   28 LFEEYDAMVPGPAASAVGNNAGGDITGQERTGRPLKINLDLLSYQAKQKNIKGDYREARRLYRTCVELDPRDGRGWLGLAR----------------------QMQKIHKYDKAQRLFEAGLENCADNPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPEHTASWVALGLLNERNKRIDEARGCFQTA 194
            + + +D  +PGP A  +       +       RP+ ++ DLL++QAKQ     +   A  LYR C++L+PRD R WLGLAR                             Y KA+ +++ GL  C +NPYLLQ   V+EE++GN+  A+ L  R+ +  P+H ASWVA G+L +++    +AR CF+ A
Sbjct:    3 MSDRFDVQIPGPDAGGISPV----VQKPPVKTRPVGLHFDLLAHQAKQALRNKNVTLAAALYRRCLQLNPRDARAWLGLARIETRGGVPLPTKGNAEGPGKPRHWSSHLNYVKAKEIYQQGLRRCPNNPYLLQGLGVLEEKKGNKQVAMGLYIRACQSDPQHAASWVARGVLEKKSGSPSKARQCFRQA 187
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BLAST of mRNA_Ecto-sp13_S_contig11875.1599.1 vs. uniprot
Match: A0A7S1TD61_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD61_9RHOD)

HSP 1 Score: 117 bits (292), Expect = 1.930e-25
Identity = 66/164 (40.24%), Postives = 96/164 (58.54%), Query Frame = 0 
Query:   20 LSAKVEAELFEEYDAMVPGPAASAVGNNAGGDITGQERTGRPLKINLDLLSYQAKQKNIKGDYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGLENCADNPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPEHTASWVALGLLNERNKR 183
            L  KV+  L +E D  VP   A ++ N             RPLKIN+DL  + A+Q   +G+  EA RL+R CV++DP DGRGWLGLAR +    + + ++  F   +  C  N +LLQA+ +MEE+ GN ++A  LL+ ++R   +H  SWVALG+L  R +R
Sbjct:   31 LERKVKEVLMDEED-RVPPLGAGSLENYL---------PSRPLKINVDLSHFHARQSQKRGNSSEALRLFRRCVDMDPYDGRGWLGLARLLFLRGEEEASRETFRNAVRYCRSNSHLLQAWGIMEEKAGNISRARRLLHSAIRADQKHAPSWVALGMLEYRRER 184
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BLAST of mRNA_Ecto-sp13_S_contig11875.1599.1 vs. uniprot
Match: A0A7S1XW26_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW26_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.820e-25
Identity = 66/181 (36.46%), Postives = 95/181 (52.49%), Query Frame = 0 
Query:   15 SNKTELSAKVEAELFEEYDAMVPGPAASAVGNNAGGDITGQERTGRPLKINLDLLSYQAKQKNIKGDYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGLENCADNPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPEHTASWVALGLLNERNKRIDEARGCFQTAT 195
            S+ ++LS +VE  L   YD  VP P  +                 RPLK+NLDLL+Y A+    KG   EA ++++ C+ LDP DGR WL LAR       + KA++LFE G+  C  NP++LQA+    ++RG+  +A  L  + V    +H ASW+ L  L+      + A  CF  AT
Sbjct:   19 SSLSDLSRRVEESLLALYDEQVPAPPKARR---------------RPLKVNLDLLNYSARNLKRKGRLNEAVKVWQRCLRLDPHDGRAWLALARMSANAGGHTKAKQLFEEGIRFCPGNPFILQAYGNYRQRRGDVVRAAELYAQGVAADAKHAASWLGLAKLSAAVGDQETAALCFCRAT 184
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BLAST of mRNA_Ecto-sp13_S_contig11875.1599.1 vs. uniprot
Match: A0A7S2SRU7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRU7_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.130e-23
Identity = 49/102 (48.04%), Postives = 67/102 (65.69%), Query Frame = 0 
Query:   92 CVELDPRDGRGWLGLARQMQKIH-KYDKAQRLFEAGLENCADNPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPEHTASWVALGLLNERNKRIDEARGCFQ 192
             + +DP DGR WL LAR   +++ K ++A+++F+  L +C  NPYLLQAF V+EE+ GN  +A  L   + R  P H ASWVA G L  R +RIDEAR CF+
Sbjct:    1 AMRMDPLDGRAWLALARHKTQVNRKPEEARKVFQEALGHCEGNPYLLQAFGVLEEREGNVPRAAELYKEATRWDPTHVASWVARGRLAHRLQRIDEARACFR 102
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BLAST of mRNA_Ecto-sp13_S_contig11875.1599.1 vs. uniprot
Match: A0A1Z5JMI6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMI6_FISSO)

HSP 1 Score: 102 bits (254), Expect = 3.440e-20
Identity = 58/150 (38.67%), Postives = 79/150 (52.67%), Query Frame = 0 
Query:   57 RTGRPLKINLDLLSYQAKQKNIKGDYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGLENCAD----------NPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPEHTASWVALGLLNERN--KRIDEARGCFQTA 194
            R G  L IN D L+Y AK++  KG   EA  LY   VE+DPRDGR +LGL+R  Q+   +  A+     G+ N A           NP+LLQA   +EE+ G  ++A +L   +VR  P H A WVAL  +  R   + +   R CF+ A
Sbjct:  256 RLGNALPINADRLNYMAKKEMKKGRVEEAEELYERAVEIDPRDGRAYLGLSRCAQRRQDFKLAREWLNLGIANSASTFNGNPDRGANPFLLQALGCLEEKAGQLSQAESLYTSAVRSRPSHAAGWVALAQIRTRKLGQSVGAGRSCFEAA 405
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BLAST of mRNA_Ecto-sp13_S_contig11875.1599.1 vs. uniprot
Match: A0A1E7FB08_9STRA (TPR-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FB08_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.230e-18
Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = 0 
Query:   57 RTGRPLKINLDLLSYQAKQKNIKGDYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGLENCAD-----------NPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPEHTASWVALGLLNERNKRIDEARG--CFQTA 194
            R G PL++N D L+Y AK++       EA+ LY   +++DPRDGR ++GL+R  Q+   +  A+     G+                NP+LLQ    +EE+ G+ ++A +L   +VR  P H ASWVAL  +  R  R   A G  CFQ A
Sbjct:   33 RLGNPLRVNADRLNYHAKKELRSNRLEEAQELYEQAIQIDPRDGRAYIGLSRCAQRRRDFKLAKEYLRIGIAQSVSCGYDSKPDVGANPFLLQTLGCLEEKMGHLSEAESLYISAVRSRPSHAASWVALAQIRTRKFRQGAAAGRVCFQAA 183
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11875.1599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FP63_ECTSI7.750e-11996.41PsbB mRNA maturation factor Mbb1 n=2 Tax=Ectocarpu... [more]
A0A7S4DG14_HETAK2.900e-3644.69Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835Z1N5_9STRA5.120e-3258.59Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S3B3F3_9EUKA1.440e-2942.14Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S2XUS2_9STRA1.430e-2633.86Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1TD61_9RHOD1.930e-2540.24Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XW26_9STRA2.820e-2536.46Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2SRU7_9STRA1.130e-2348.04Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1Z5JMI6_FISSO3.440e-2038.67Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A1E7FB08_9STRA3.230e-1835.76TPR-like protein n=1 Tax=Fragilariopsis cylindrus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 236..269
e-value: 19.0
score: 12.6
coord: 168..201
e-value: 0.96
score: 18.5
coord: 66..99
e-value: 9.7
score: 15.1
coord: 100..133
e-value: 90.0
score: 6.6
coord: 304..337
e-value: 110.0
score: 5.9
coord: 202..235
e-value: 140.0
score: 4.9
coord: 270..303
e-value: 34.0
score: 10.3
coord: 134..167
e-value: 46.0
score: 9.1
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 79..98
e-value: 0.14
score: 12.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 270..303
score: 6.962
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 66..99
score: 7.523
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 202..235
score: 7.139
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 168..201
score: 8.467
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 134..167
score: 6.756
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 236..269
score: 7.582
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 304..337
score: 5.782
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 100..133
score: 5.871
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 80..112
e-value: 3.9
score: 16.5
coord: 114..146
e-value: 12.0
score: 14.9
coord: 182..214
e-value: 14.0
score: 14.4
coord: 250..282
e-value: 770.0
score: 1.6
coord: 284..316
e-value: 88.0
score: 8.5
coord: 216..248
e-value: 60.0
score: 9.7
NoneNo IPR availablePFAMPF14559TPR_19coord: 282..342
e-value: 4.0E-7
score: 30.4
NoneNo IPR availablePFAMPF13432TPR_16coord: 146..200
e-value: 1.6E-5
score: 25.5
NoneNo IPR availablePANTHERPTHR44917FAMILY NOT NAMEDcoord: 42..346
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 59..347
e-value: 1.5E-49
score: 170.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 76..336
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 66..337
score: 40.958

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11875contigEcto-sp13_S_contig11875:2..4240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11875.1599.1mRNA_Ecto-sp13_S_contig11875.1599.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11875 2..4240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11875.1599.1 ID=prot_Ecto-sp13_S_contig11875.1599.1|Name=mRNA_Ecto-sp13_S_contig11875.1599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=347bp
IVPQKSPSAGSAAASNKTELSAKVEAELFEEYDAMVPGPAASAVGNNAGG
DITGQERTGRPLKINLDLLSYQAKQKNIKGDYREARRLYRTCVELDPRDG
RGWLGLARQMQKIHKYDKAQRLFEAGLENCADNPYLLQAFAVMEEQRGNQ
AKALTLLNRSVRMHPEHTASWVALGLLNERNKRIDEARGCFQTATRNDPR
NHYAWLVWAMLEKRIGSIDVAREKFKMCLKVNPRNAKVYQAWGVLEASEE
NIALATELFRAGLEQRPDNTYIMQAWALMEAKQGNTDAAISLFKEAILKR
PRDGAVWQAYALLLKDMGDVAGARALFSKGTRQSPKHCPTWQAWGML
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR003107HAT
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom