prot_Ecto-sp13_S_contig5636.15977.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5636.15977.1
Unique Nameprot_Ecto-sp13_S_contig5636.15977.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length378
Homology
BLAST of mRNA_Ecto-sp13_S_contig5636.15977.1 vs. uniprot
Match: D7FJ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ41_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 1.800e-112
Identity = 201/216 (93.06%), Postives = 209/216 (96.76%), Query Frame = 0
Query:  162 LNLNVFGWGGDNEAKTKAKQEAEDAEARDALRKAREERLERELEESGAAEEAEKVGDDKTAGGILVSMAKPAEPVRQAAVLSDKRLWLDVVEPFFASVSLAISSLYPLWHTLRGMFGLSLLFYGDDFATLAFHIVVFRISGWKKAAKSKDELVAYYKKARRTMTKAAKDVRASAAIIARKNRXXXXXXXXXXXXKRLLAMGRVSAQEARAFIDKYR 377
            +NL+VFGWGGDNEAK KAKQEAEDAEARDALRKAREERLERELEESGAAEEAE VGDDKTAGGILVSMAKPAEPVRQ A+LSDKRLWLDVVEPFFASVSLAISSLYPLWHTLRGMFGLSLLFYG+DFATLAFHIVVFRISGWKKAAKSKDELVAYYKKAR+TMTKAAKDVRASAAIIARK+RXXXXXXXXXXXX    A+GRVSA+EARAFIDKYR
Sbjct:    1 MNLSVFGWGGDNEAKRKAKQEAEDAEARDALRKAREERLERELEESGAAEEAENVGDDKTAGGILVSMAKPAEPVRQVALLSDKRLWLDVVEPFFASVSLAISSLYPLWHTLRGMFGLSLLFYGEDFATLAFHIVVFRISGWKKAAKSKDELVAYYKKARQTMTKAAKDVRASAAIIARKDRXXXXXXXXXXXXXXXHAIGRVSAEEARAFIDKYR 216          
BLAST of mRNA_Ecto-sp13_S_contig5636.15977.1 vs. uniprot
Match: A0A835YUQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUQ5_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.300e-16
Identity = 51/131 (38.93%), Postives = 81/131 (61.83%), Query Frame = 0
Query:  247 LWLDVVEPFFASVSLAISSLYPLWHTLRGMFGLSLLFYGDDFATLAFHIVVFRISGWKKAAKSKDELVAYYKKARRTMTKAAKDVRASAAIIARKNRXXXXXXXXXXXXKRLLAMGRVSAQEARAFIDKYR 377
            LWLD  E     + +AIS+L P+W  ++ +FG+S+LFYG +F T+AFHI++FRISG+K   K   +LV++YKKAR+    AA+   +    +A++              + +L  GR++A+EAR FI ++R
Sbjct:   47 LWLDWAEVL---LPVAISALTPVWRLVKLLFGISILFYGSNFQTIAFHIIIFRISGYKSVIKHCRDLVSHYKKARKATALAARHTLSLNESLAQQKLRREEREHMLRDRQEMLRDGRITAEEARQFITRHR 174          
BLAST of mRNA_Ecto-sp13_S_contig5636.15977.1 vs. uniprot
Match: A0A835Z8D7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8D7_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.900e-13
Identity = 52/146 (35.62%), Postives = 81/146 (55.48%), Query Frame = 0
Query:  232 PAEPVRQAAVLSDKRLWLDVVEPFFASVSLAISSLYPLWHTLRGMFGLSLLFYGDDFATLAFHIVVFRISGWKKAAKSKDELVAYYKKARRTMTKAAKDVRASAAIIARKNRXXXXXXXXXXXXKRLLAMGRVSAQEARAFIDKYR 377
            P    +Q    +   L L+ VE     V+L  +   PLW   + +FGLS+LFYG +F TLA HI++FRISG+K   +   EL ++Y K R     AAK+ ++    +A+K +            +++L  GR++A+EA+AFI K+R
Sbjct:   11 PVITKQQGKNAARNELILERVEALAPKVALVTT---PLWRVTKLLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTKVRAATEAAAKNTKSLNESLAQKAKRREAREKMLVDRQQMLKDGRITAEEAQAFIAKHR 153          
BLAST of mRNA_Ecto-sp13_S_contig5636.15977.1 vs. uniprot
Match: D8LTP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP3_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 4.510e-8
Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 0
Query:  242 LSDKRLWLDVVEPFFASVSLAISSL-YPLWHTLRGMFGLSLLFYGDDFATLAFHIVVFRISGWKKAAKSKDELVAYYKKARRTMTKAA 328
            +   R++LD VE    S+   +  +  P  H  R  FGLSLLFYG  F T AFH++VFRISG+K+   S  +L A Y+KAR+++ +AA
Sbjct:    1 MQKNRIFLDNVEDILGSLGRRLQMVGKPALHLTRLGFGLSLLFYGMAFRTFAFHVIVFRISGFKQVQVSSGKLAAKYRKARQSIREAA 88          
BLAST of mRNA_Ecto-sp13_S_contig5636.15977.1 vs. uniprot
Match: A0A835Z464_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z464_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 6.540e-8
Identity = 43/131 (32.82%), Postives = 71/131 (54.20%), Query Frame = 0
Query:  246 RLWLDVVEPFFASVSLAISSLYPLWHTLRGMFGLSLLFYGDDFATLAFHIVVFRISGWKKAAKSKDELVAYYKKARRTMTKAAKDVRASAAIIARKNRXXXXXXXXXXXXKRLLAMGRVSAQEARAFIDKY 376
            +L+L+ VE    +V+  +  + P++ +L+ +FGLS+LF+G  F +LA HI++F+I G+KK       LVA+Y++ R     AA+  R +                     K +LA GR+   EARAF+ K+
Sbjct:   64 KLFLEHVE---GAVNAVVPVVAPVFFSLKALFGLSILFFGMTFKSLALHIILFQIVGFKKVVMHWHHLVAHYRRVRAATLHAARSARRTLKEREDTGARVREQEAMLRDRKAMLADGRLDVDEARAFMAKH 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5636.15977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FJ41_ECTSI1.800e-11293.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YUQ5_9STRA2.300e-1638.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z8D7_9STRA2.900e-1335.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LTP3_ECTSI4.510e-844.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z464_9STRA6.540e-832.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..198
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..270
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 271..275
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 276..300
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 301..377
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.602
NoneNo IPR availableTMHMMTMhelixcoord: 276..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5636contigEcto-sp13_S_contig5636:5083..8482 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5636.15977.1mRNA_Ecto-sp13_S_contig5636.15977.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5636 5083..8482 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5636.15977.1 ID=prot_Ecto-sp13_S_contig5636.15977.1|Name=mRNA_Ecto-sp13_S_contig5636.15977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp
MKQRARLIALGILVVECVGGRHLAVLHEECCSRKGQGKGGSCERVHRQQR
CWYKDAGKFSSVTRERKRRGRHDAQFQECASSQHASRRERSAVRAVAPYG
VKAGCVCQGCPTEASWLDPENGASISGSRRKGPAPSVVRFRGGSASTRET
KGAIKEDSGWGLNLNVFGWGGDNEAKTKAKQEAEDAEARDALRKAREERL
ERELEESGAAEEAEKVGDDKTAGGILVSMAKPAEPVRQAAVLSDKRLWLD
VVEPFFASVSLAISSLYPLWHTLRGMFGLSLLFYGDDFATLAFHIVVFRI
SGWKKAAKSKDELVAYYKKARRTMTKAAKDVRASAAIIARKNRLVARKEE
MMVEKKRLLAMGRVSAQEARAFIDKYR*
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