prot_Ecto-sp13_S_contig5626.15966.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5626.15966.1
Unique Nameprot_Ecto-sp13_S_contig5626.15966.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length143
Homology
BLAST of mRNA_Ecto-sp13_S_contig5626.15966.1 vs. uniprot
Match: A0A1V9ZDB2_9STRA (Regulator of chromosome condensation (RCC1) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDB2_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 5.220e-6
Identity = 37/105 (35.24%), Postives = 54/105 (51.43%), Query Frame = 0
Query:    5 LELFAAVALQ-CHGLSREKAGFMFDMFDFEGQQEVSYDELAICISTVVGALSKVSGPCG-----LMDEKSVDKLADDAYVVAGSDASVSLSRPDFLKWVEKGLKI 103
            LE  AA+A+    G   EKAGF+FD+FDF     V+ DEL I + + V  L+K++   G     L     ++ LA   +   G D +  L +  FL+WV +  KI
Sbjct:   89 LEFLAALAITGAFGKLLEKAGFVFDLFDFNQSGAVTRDELLILLKSSVRGLTKITRGLGPQLVRLCPMPQIEDLASLCFQDCGLDPTDDLRKELFLQWVRRTPKI 193          
BLAST of mRNA_Ecto-sp13_S_contig5626.15966.1 vs. uniprot
Match: A0A3F2RTS5_9STRA (EF-hand domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RTS5_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.680e-5
Identity = 37/105 (35.24%), Postives = 52/105 (49.52%), Query Frame = 0
Query:    5 LELFAAVALQC-HGLSREKAGFMFDMFDFEGQQEVSYDELAICISTVVGALSKVSGPCG-----LMDEKSVDKLADDAYVVAGSDASVSLSRPDFLKWVEKGLKI 103
            LE+  A+AL   +G   EKAG +FD+FDF+    ++ DEL I I + V  LSK +   G     L     V +L    +V    D    L R  F+ WV++  KI
Sbjct:   89 LEVLTALALTATNGKLEEKAGAVFDIFDFDDSGAITRDELGILIKSAVRGLSKATKGLGPRLAVLCPMSEVAELTRQCFVHCDLDDEQDLPRDRFVLWVKQTPKI 193          
BLAST of mRNA_Ecto-sp13_S_contig5626.15966.1 vs. uniprot
Match: H3H274_PHYRM (EF-hand domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H274_PHYRM)

HSP 1 Score: 53.5 bits (127), Expect = 1.780e-5
Identity = 38/105 (36.19%), Postives = 52/105 (49.52%), Query Frame = 0
Query:    5 LELFAAVALQ-CHGLSREKAGFMFDMFDFEGQQEVSYDELAICISTVVGALSKVS---GP--CGLMDEKSVDKLADDAYVVAGSDASVSLSRPDFLKWVEKGLKI 103
            LE   A+AL    G   EKAG +FD+FDF+    ++ DEL I I + V  LSK +   GP    L   + V +L    +V    D    L R  F+ WV++  KI
Sbjct:   21 LEFLTALALSTADGKLDEKAGAVFDIFDFDDSGAITRDELGILIKSAVRGLSKATKGLGPRLAALCPMREVAELTRQCFVHCDLDDEQDLPRARFILWVKQTPKI 125          
BLAST of mRNA_Ecto-sp13_S_contig5626.15966.1 vs. uniprot
Match: A0A3R7HXZ4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HXZ4_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.830e-5
Identity = 37/105 (35.24%), Postives = 52/105 (49.52%), Query Frame = 0
Query:    5 LELFAAVALQC-HGLSREKAGFMFDMFDFEGQQEVSYDELAICISTVVGALSKVSGPCG-----LMDEKSVDKLADDAYVVAGSDASVSLSRPDFLKWVEKGLKI 103
            LE+  A+AL   +G   EKAG +FD+FDF+    ++ DEL I I + V  LSK +   G     L     V +L    +V    D    L R  F+ WV++  KI
Sbjct:   89 LEVLTALALTATNGKLEEKAGAVFDIFDFDDSGAITRDELGILIKSAVRGLSKATKGLGPRLAVLCPMSEVAELTRQCFVHCDLDDEQDLPRDRFVLWVKQTPKI 193          
BLAST of mRNA_Ecto-sp13_S_contig5626.15966.1 vs. uniprot
Match: A0A8J5LYG4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5LYG4_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.290e-5
Identity = 38/105 (36.19%), Postives = 51/105 (48.57%), Query Frame = 0
Query:    5 LELFAAVALQ-CHGLSREKAGFMFDMFDFEGQQEVSYDELAICISTVVGALSKVS---GP--CGLMDEKSVDKLADDAYVVAGSDASVSLSRPDFLKWVEKGLKI 103
            LE   A+AL    G   EKAG +FD+FDF+    ++ DEL I I + V  LSK +   GP    L     V +L    +V    D    L R  F+ WV++  KI
Sbjct:   87 LEFLTALALTTADGKLEEKAGAVFDIFDFDDSGAITRDELGILIKSAVRGLSKATKGLGPKLAALCPMSEVAELTRQCFVHCDLDDEQDLPRSRFILWVKQTPKI 191          
BLAST of mRNA_Ecto-sp13_S_contig5626.15966.1 vs. uniprot
Match: A0A7S3XPX3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPX3_HETAK)

HSP 1 Score: 52.0 bits (123), Expect = 3.340e-5
Identity = 27/90 (30.00%), Postives = 50/90 (55.56%), Query Frame = 0
Query:   21 EKAGFMFDMFDFEGQQEVSYDELAICISTVVGALSKVSGPCGLMDEKSVDKLADDAYVVAGSDASVSLSRPDFLKWVEKGLKIDLAADVT 110
            +K+  +FD FDFEG+ ++S DE+ IC+ +V+ A+S ++G      ++ +++L  +A+     DA   + +  F KW     K+D     T
Sbjct:   74 QKSEAIFDAFDFEGEGDISLDEMTICLLSVLRAVSVMTGRESEPTDQGMEELCLEAFGQFQLDAQDYIQKGQFAKWAAS--KVDATTSAT 161          
BLAST of mRNA_Ecto-sp13_S_contig5626.15966.1 vs. uniprot
Match: A0A0W8DMV0_PHYNI (mRNA-capping enzyme n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DMV0_PHYNI)

HSP 1 Score: 52.4 bits (124), Expect = 4.430e-5
Identity = 38/105 (36.19%), Postives = 51/105 (48.57%), Query Frame = 0
Query:    5 LELFAAVALQ-CHGLSREKAGFMFDMFDFEGQQEVSYDELAICISTVVGALSKVS---GP--CGLMDEKSVDKLADDAYVVAGSDASVSLSRPDFLKWVEKGLKI 103
            LE   A+AL    G   EKAG +FD+FDF+    ++ DEL I I + V  LSK +   GP    L     V +L    +V    D    L R  F+ WV++  KI
Sbjct:   89 LEFLTALALTTADGKLDEKAGAVFDIFDFDDSGAITRDELGILIKSAVRGLSKATKGLGPRLAALCPMSEVAELTRQCFVHCDLDDEQDLPRTRFILWVKQTPKI 193          
BLAST of mRNA_Ecto-sp13_S_contig5626.15966.1 vs. uniprot
Match: W2Q6Y9_PHYPN (EF-hand domain-containing protein n=28 Tax=Phytophthora TaxID=4783 RepID=W2Q6Y9_PHYPN)

HSP 1 Score: 52.4 bits (124), Expect = 4.520e-5
Identity = 38/105 (36.19%), Postives = 51/105 (48.57%), Query Frame = 0
Query:    5 LELFAAVALQ-CHGLSREKAGFMFDMFDFEGQQEVSYDELAICISTVVGALSKVS---GP--CGLMDEKSVDKLADDAYVVAGSDASVSLSRPDFLKWVEKGLKI 103
            LE   A+AL    G   EKAG +FD+FDF+    ++ DEL I I + V  LSK +   GP    L     V +L    +V    D    L R  F+ WV++  KI
Sbjct:   89 LEFLTALALTTADGKLDEKAGAVFDIFDFDDSGAITRDELGILIKSAVRGLSKATKGLGPRLAALCPMSEVAELTRQCFVHCDLDDEQDLPRTRFILWVKQTPKI 193          
BLAST of mRNA_Ecto-sp13_S_contig5626.15966.1 vs. uniprot
Match: A0A5D6XTA3_9STRA (EF-hand domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTA3_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 8.350e-5
Identity = 36/105 (34.29%), Postives = 52/105 (49.52%), Query Frame = 0
Query:    5 LELFAAVAL-QCHGLSREKAGFMFDMFDFEGQQEVSYDELAICISTVVGALSKVSGPCG-----LMDEKSVDKLADDAYVVAGSDASVSLSRPDFLKWVEKGLKI 103
            LE+  A+AL    G   +KAG +FD+FDF+G   ++ DEL I + + V  LSK++   G     L     V +LA   +     D    L R  F+ WV+   KI
Sbjct:   89 LEVLTALALASVDGKLDDKAGAVFDVFDFDGSGTITLDELCILLKSAVRGLSKLTKGLGPRFLALGPAAEVGELARQCFRDCDLDEEQDLPRERFVLWVKHTPKI 193          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5626.15966.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A1V9ZDB2_9STRA5.220e-635.24Regulator of chromosome condensation (RCC1) n=1 Ta... [more]
A0A3F2RTS5_9STRA1.680e-535.24EF-hand domain-containing protein n=1 Tax=Phytopht... [more]
H3H274_PHYRM1.780e-536.19EF-hand domain-containing protein n=1 Tax=Phytopht... [more]
A0A3R7HXZ4_9STRA1.830e-535.24Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A8J5LYG4_9STRA2.290e-536.19Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A7S3XPX3_HETAK3.340e-530.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0W8DMV0_PHYNI4.430e-536.19mRNA-capping enzyme n=1 Tax=Phytophthora nicotiana... [more]
W2Q6Y9_PHYPN4.520e-536.19EF-hand domain-containing protein n=28 Tax=Phytoph... [more]
A0A5D6XTA3_9STRA8.350e-534.29EF-hand domain-containing protein n=1 Tax=Pythium ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..142
NoneNo IPR availableGENE3D1.10.238.10coord: 4..103
e-value: 4.5E-8
score: 34.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 18..53
score: 8.934
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 6..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5626contigEcto-sp13_S_contig5626:4131..6072 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5626.15966.1mRNA_Ecto-sp13_S_contig5626.15966.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5626 4131..6084 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5626.15966.1 ID=prot_Ecto-sp13_S_contig5626.15966.1|Name=mRNA_Ecto-sp13_S_contig5626.15966.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=143bp
MLYPLELFAAVALQCHGLSREKAGFMFDMFDFEGQQEVSYDELAICISTV
VGALSKVSGPCGLMDEKSVDKLADDAYVVAGSDASVSLSRPDFLKWVEKG
LKIDLAADVTLEDLGKALGVWSSEDHARLQQLQREREQREREQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair