prot_Ecto-sp13_S_contig55861.15897.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig55861.15897.1
Unique Nameprot_Ecto-sp13_S_contig55861.15897.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length78
Homology
BLAST of mRNA_Ecto-sp13_S_contig55861.15897.1 vs. uniprot
Match: D7FR96_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR96_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 2.750e-45
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0
Query:    1 TLEVSVSSPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRERVGDPGLAVTSPSYLLDNTYEVSDEDLT 77
            TLEVSV+SPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVR RVGDPGLAVTSPSYLLDNTYEV+DEDLT
Sbjct:   80 TLEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLT 156          
BLAST of mRNA_Ecto-sp13_S_contig55861.15897.1 vs. uniprot
Match: A0A7S2GEU5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GEU5_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.260e-24
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    6 VSSPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRERVGDPGLAVTSPSYLLDNTYEVSDEDL 76
            V++PE+ME  GA     ++ GD++ L GDLG GKTCFARGFV+ RVGDP L VTSPSYLLD +YEV DEDL
Sbjct:   49 VNTPEDMERFGATLARGSTAGDIIFLTGDLGAGKTCFARGFVKARVGDPYLRVTSPSYLLDQSYEVEDEDL 119          
BLAST of mRNA_Ecto-sp13_S_contig55861.15897.1 vs. uniprot
Match: A0A835Z1V9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V9_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.320e-22
Identity = 45/73 (61.64%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    1 TLEVSVSSPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRERVGDPGLAVTSPSYLLDNTYEVSD 73
            T  + + SPE ME+ G      A  GDV+LL GDLGTGKTCF+RGF+RE   DP L VTSPSYLLDNTYE +D
Sbjct:   99 TSSLMIRSPESMEQLGQLLARGAEAGDVILLIGDLGTGKTCFSRGFIRECAEDPDLLVTSPSYLLDNTYEATD 171          
BLAST of mRNA_Ecto-sp13_S_contig55861.15897.1 vs. uniprot
Match: A0A7S2EJ05_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJ05_TRICV)

HSP 1 Score: 91.3 bits (225), Expect = 2.650e-21
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    1 TLEVSVSSPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRERVGDPGLAVTSPSYLLDNTY 69
            TL +SV +PE+ME+ GA      SGGDV+LL GDLG GKTC +RGFVR R G  G+ VTSP+YLL N+Y
Sbjct:    3 TLTLSVPTPEDMEDVGAVLSVGTSGGDVILLGGDLGAGKTCLSRGFVRARTGMEGMRVTSPTYLLSNSY 71          
BLAST of mRNA_Ecto-sp13_S_contig55861.15897.1 vs. uniprot
Match: A0A7S4SUF0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SUF0_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.240e-19
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0
Query:    1 TLEVSVSSPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRERVGDPGLAVTSPSYLLDNTYEVSD 73
            +L++S+ + E+ME+ GA       GGD +LL GDLG GKTCF+RGFVR R G   L VTSP+YLL NTYE  D
Sbjct:  186 SLQLSIPTSEDMEDVGAIISMGTKGGDTILLDGDLGAGKTCFSRGFVRARTGYIDLRVTSPTYLLSNTYEADD 258          
BLAST of mRNA_Ecto-sp13_S_contig55861.15897.1 vs. uniprot
Match: A0A7S4SUD7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SUD7_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.620e-19
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0
Query:    1 TLEVSVSSPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRERVGDPGLAVTSPSYLLDNTYEVSD 73
            +L++S+ + E+ME+ GA       GGD +LL GDLG GKTCF+RGFVR R G   L VTSP+YLL NTYE  D
Sbjct:  186 SLQLSIPTSEDMEDVGAIISMGTKGGDTILLDGDLGAGKTCFSRGFVRARTGYIDLRVTSPTYLLSNTYEADD 258          
BLAST of mRNA_Ecto-sp13_S_contig55861.15897.1 vs. uniprot
Match: A0A7S2LPC8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPC8_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.090e-18
Identity = 42/68 (61.76%), Postives = 48/68 (70.59%), Query Frame = 0
Query:    2 LEVSVSSPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRERVGDPGLAVTSPSYLLDNTY 69
            L V + SPE ME  GA    D+  GDV+ L GDLG GKTCF+RGFVRERV  P L VTSP++LL NTY
Sbjct:  105 LHVKIESPEIMESLGAALAKDSVPGDVIFLDGDLGAGKTCFSRGFVRERVQRPRLRVTSPTFLLSNTY 172          
BLAST of mRNA_Ecto-sp13_S_contig55861.15897.1 vs. uniprot
Match: K0S9V1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S9V1_THAOC)

HSP 1 Score: 84.3 bits (207), Expect = 4.230e-18
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 TLEVSVSSPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRERVGDPGLAVTSPSYLLDNTYEV 71
            +LE+++ +PE+ME+ G     ++  GDV+LL GDLG GKTCF+RGFVR + G P   VTSP+YLL N Y V
Sbjct:   73 SLELTIPTPEDMEDIGGLLSVNSLPGDVILLDGDLGAGKTCFSRGFVRAKTGLPDERVTSPTYLLSNAYSV 143          
BLAST of mRNA_Ecto-sp13_S_contig55861.15897.1 vs. uniprot
Match: A0A7S2XNM5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNM5_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.470e-17
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    1 TLEVSVSSPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRERVGDPGLAVTSPSYLLDNTYEVSD 73
            +L + + +PE+ME+ GA        GD +LL GDLG GKTC ARGFVR R G   ++VTSP+YLL NTYE  D
Sbjct:   87 SLCLDIPTPEDMEDLGAVLSMGTGPGDSILLKGDLGAGKTCLARGFVRARTGMADISVTSPTYLLSNTYEADD 159          
BLAST of mRNA_Ecto-sp13_S_contig55861.15897.1 vs. uniprot
Match: K3WTU4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTU4_GLOUD)

HSP 1 Score: 77.0 bits (188), Expect = 3.470e-16
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 0
Query:   12 MEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRERVGDPGLAVTSPSYLLDNTYEVSD 73
            ME+ GA        GDV+ L GDLG GKTCFARGF+RER  +  + VTSP+YLL NTYE S+
Sbjct:    1 MEQLGARVAGQCRRGDVIFLKGDLGCGKTCFARGFIRERTQNAAMQVTSPTYLLVNTYEQSE 62          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig55861.15897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR96_ECTSI2.750e-4596.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2GEU5_9STRA1.260e-2464.79Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835Z1V9_9STRA1.320e-2261.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2EJ05_TRICV2.650e-2160.87Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4SUF0_9STRA1.240e-1956.16Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4SUD7_9STRA4.620e-1956.16Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2LPC8_9STRA1.090e-1861.76Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
K0S9V1_THAOC4.230e-1853.52Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2XNM5_9STRA1.470e-1753.42Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K3WTU4_GLOUD3.470e-1658.06Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..77
e-value: 8.6E-13
score: 50.0
NoneNo IPR availablePANTHERPTHR33540:SF2TRNA THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS PROTEIN TSAEcoord: 2..73
NoneNo IPR availablePANTHERPTHR33540FAMILY NOT NAMEDcoord: 2..73
IPR003442tRNA threonylcarbamoyl adenosine modification protein TsaEPFAMPF02367TsaEcoord: 7..74
e-value: 4.4E-13
score: 49.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 24..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig55861contigEcto-sp13_S_contig55861:512..889 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig55861.15897.1mRNA_Ecto-sp13_S_contig55861.15897.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig55861 512..889 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig55861.15897.1 ID=prot_Ecto-sp13_S_contig55861.15897.1|Name=mRNA_Ecto-sp13_S_contig55861.15897.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=78bp
TLEVSVSSPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRER
VGDPGLAVTSPSYLLDNTYEVSDEDLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003442T6A_TsaE
IPR027417P-loop_NTPase