prot_Ecto-sp13_S_contig55813.15891.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig55813.15891.1
Unique Nameprot_Ecto-sp13_S_contig55813.15891.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length113
Homology
BLAST of mRNA_Ecto-sp13_S_contig55813.15891.1 vs. uniprot
Match: A0A6H5JJC7_9PHAE (MHD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJC7_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.410e-72
Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0
Query:    1 MPDCKFGLNDKLIMERDANARGRQDRRPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKV 113
            MPDCKFGLNDKLIMERD NARGRQDRRPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKV
Sbjct:  211 MPDCKFGLNDKLIMERDGNARGRQDRRPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKV 323          
BLAST of mRNA_Ecto-sp13_S_contig55813.15891.1 vs. uniprot
Match: A0A835Z9G3_9STRA (Clathrin assembly complex, medium subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G3_9STRA)

HSP 1 Score: 181 bits (458), Expect = 6.340e-53
Identity = 90/119 (75.63%), Postives = 100/119 (84.03%), Query Frame = 0
Query:    1 MPDCKFGLNDKLIMERDA--NARGRQDR----RPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKV 113
            MP+CKFGLNDKLIME++A   A GR       + +V LDDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV+DNVNLP RI+PAVQEEGR RVTINLK SA FSYKLF  N+V+KV
Sbjct:  226 MPECKFGLNDKLIMEKEALERAGGRTAATAHGKRSVELDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVSDNVNLPFRIVPAVQEEGRTRVTINLKCSAQFSYKLFAENVVIKV 344          
BLAST of mRNA_Ecto-sp13_S_contig55813.15891.1 vs. uniprot
Match: A0A4D9D2J2_9STRA (MHD domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2J2_9STRA)

HSP 1 Score: 176 bits (445), Expect = 6.700e-51
Identity = 84/115 (73.04%), Postives = 99/115 (86.09%), Query Frame = 0
Query:    2 PDCKFGLNDKLIMERDA--NARGRQDRRPA-VALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKV 113
            P+CKFGLNDKLIM+R+A   A G   RR A V +DDCTFHRCVRLG+FDADRTITFIPP+GEFELMRYRV +NVNLP R+IPA+QEEGR RV +N+KV+A+FS KLFG N+V+KV
Sbjct:  211 PECKFGLNDKLIMDREAAGKASGAVTRRSAGVEIDDCTFHRCVRLGRFDADRTITFIPPDGEFELMRYRVTENVNLPFRLIPAIQEEGRNRVAVNVKVTANFSSKLFGQNVVIKV 325          
BLAST of mRNA_Ecto-sp13_S_contig55813.15891.1 vs. uniprot
Match: A0A7S0AFK6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AFK6_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.460e-50
Identity = 81/114 (71.05%), Postives = 98/114 (85.96%), Query Frame = 0
Query:    1 MPDCKFGLNDKLIMERDANARGRQDRRPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEE-GRGRVTINLKVSADFSYKLFGSNIVVKV 113
            MP+CKFGLNDKL++E++++      R+P V +DDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV DN+NLP RIIPAVQEE G  RV+INLKV A+FS KLF +++V+KV
Sbjct:   31 MPECKFGLNDKLVIEKESSNM----RKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVNDNINLPFRIIPAVQEEQGNTRVSINLKVIANFSDKLFATHVVIKV 140          
BLAST of mRNA_Ecto-sp13_S_contig55813.15891.1 vs. uniprot
Match: A0A6V1NZE4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZE4_HETAK)

HSP 1 Score: 168 bits (425), Expect = 3.340e-48
Identity = 75/116 (64.66%), Postives = 96/116 (82.76%), Query Frame = 0
Query:    1 MPDCKFGLNDKLIMERDANARGRQ---DRRPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKV 113
            MP+C+FGLNDKLIMERD++A  R     ++  VA+DDCTFHRCVRLGKFDADRTITF+PP+GEFELMRYRV DN++ P +++PAVQEEGR RV+I +KV   F  KL+ +N+V+K+
Sbjct:  210 MPECRFGLNDKLIMERDSSASARAVHGAKKGGVAIDDCTFHRCVRLGKFDADRTITFVPPDGEFELMRYRVTDNIHCPFQVVPAVQEEGRSRVSITVKVMGKFGQKLYATNVVIKI 325          
BLAST of mRNA_Ecto-sp13_S_contig55813.15891.1 vs. uniprot
Match: A0A7S2MKC8_9STRA (Hypothetical protein n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S2MKC8_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.370e-48
Identity = 79/114 (69.30%), Postives = 99/114 (86.84%), Query Frame = 0
Query:    1 MPDCKFGLNDKLIMERDANARGRQDRRPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEE-GRGRVTINLKVSADFSYKLFGSNIVVKV 113
            MP+CKFGLNDKL++E++++ +    R+P V +DDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV DN+NLP RIIPAVQEE G+ +V+INLKV A+FS KLF +++ +KV
Sbjct:  247 MPECKFGLNDKLVIEKESSGQ----RKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVTDNINLPFRIIPAVQEEKGQTKVSINLKVIANFSDKLFATHVAIKV 356          
BLAST of mRNA_Ecto-sp13_S_contig55813.15891.1 vs. uniprot
Match: A0A7S1VT68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VT68_9STRA)

HSP 1 Score: 168 bits (425), Expect = 5.370e-48
Identity = 79/114 (69.30%), Postives = 97/114 (85.09%), Query Frame = 0
Query:    1 MPDCKFGLNDKLIMERDANARGRQDRRPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEE-GRGRVTINLKVSADFSYKLFGSNIVVKV 113
            MP+CKFGLNDKL++ER+ +      R+P V +DDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV DN+NLP RIIPAVQEE G  RV+INLK+ A+FS +LF +++V+K+
Sbjct:  240 MPECKFGLNDKLVIEREESGA----RKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVTDNINLPFRIIPAVQEEHGHTRVSINLKIIANFSDQLFATHVVIKI 349          
BLAST of mRNA_Ecto-sp13_S_contig55813.15891.1 vs. uniprot
Match: A0A7S2YSX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSX5_9STRA)

HSP 1 Score: 164 bits (416), Expect = 6.630e-48
Identity = 77/114 (67.54%), Postives = 98/114 (85.96%), Query Frame = 0
Query:    1 MPDCKFGLNDKLIMERDANARGRQDRRPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEE-GRGRVTINLKVSADFSYKLFGSNIVVKV 113
            MP+CKFGLNDKL+++++     ++DR+P V +DDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV DN+NLP RIIPAVQEE    +V+INLKV A+FS +LF +++V+K+
Sbjct:  209 MPECKFGLNDKLVIDKE-----KEDRKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVTDNINLPFRIIPAVQEEPSLTKVSINLKVIANFSDQLFATHVVLKI 317          
BLAST of mRNA_Ecto-sp13_S_contig55813.15891.1 vs. uniprot
Match: B7FSB1_PHATC (Predicted protein n=2 Tax=Naviculales TaxID=38748 RepID=B7FSB1_PHATC)

HSP 1 Score: 166 bits (419), Expect = 2.200e-47
Identity = 77/114 (67.54%), Postives = 99/114 (86.84%), Query Frame = 0
Query:    1 MPDCKFGLNDKLIMERDANARGRQDRRPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQE-EGRGRVTINLKVSADFSYKLFGSNIVVKV 113
            MP+CKFGLNDKL++E+D     ++DR+P+V +DDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV DN+NLP RIIPAVQE +   +V+I+LKV A+FS +LF +++V+K+
Sbjct:  209 MPECKFGLNDKLVIEKD-----KEDRKPSVDIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVTDNINLPFRIIPAVQESQNNTKVSIDLKVIANFSDQLFATHVVIKI 317          
BLAST of mRNA_Ecto-sp13_S_contig55813.15891.1 vs. uniprot
Match: A0A7S4HKQ6_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HKQ6_9STRA)

HSP 1 Score: 163 bits (412), Expect = 5.050e-46
Identity = 77/113 (68.14%), Postives = 96/113 (84.96%), Query Frame = 0
Query:    1 MPDCKFGLNDKLIMERDANARGRQDRRPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKV 113
            MP+CKFGLNDKL++++++ A+    R+P V +DDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV DN+NLP RI PAV EE   +V+INLKV A+FS KLF +++V+KV
Sbjct:  249 MPECKFGLNDKLVIDKESGAQ----RKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVTDNINLPFRITPAVLEEAM-KVSINLKVIANFSDKLFATHVVIKV 356          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig55813.15891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJC7_9PHAE1.410e-7299.12MHD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z9G3_9STRA6.340e-5375.63Clathrin assembly complex, medium subunit n=1 Tax=... [more]
A0A4D9D2J2_9STRA6.700e-5173.04MHD domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A7S0AFK6_9STRA2.460e-5071.05Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A6V1NZE4_HETAK3.340e-4864.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2MKC8_9STRA4.370e-4869.30Hypothetical protein n=4 Tax=Bacillariophyta TaxID... [more]
A0A7S1VT68_9STRA5.370e-4869.30Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2YSX5_9STRA6.630e-4867.54Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
B7FSB1_PHATC2.200e-4767.54Predicted protein n=2 Tax=Naviculales TaxID=38748 ... [more]
A0A7S4HKQ6_9STRA5.050e-4668.14Hypothetical protein n=3 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001392Clathrin adaptor, mu subunitPRINTSPR00314CLATHRINADPTcoord: 32..59
score: 63.64
coord: 101..113
score: 15.91
NoneNo IPR availableGENE3D2.60.40.1170coord: 1..73
e-value: 7.6E-37
score: 129.2
NoneNo IPR availableGENE3D2.60.40.1170coord: 74..113
e-value: 7.6E-37
score: 129.2
NoneNo IPR availablePANTHERPTHR10529:SF236AP-2 COMPLEX SUBUNIT MUcoord: 1..113
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 1..113
IPR028565Mu homology domainPFAMPF00928Adap_comp_subcoord: 1..112
e-value: 1.9E-28
score: 99.6
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 1..113
score: 18.609
IPR018240Clathrin adaptor, mu subunit, conserved sitePROSITEPS00991CLAT_ADAPTOR_M_2coord: 52..66
IPR036168AP-2 complex subunit mu, C-terminal superfamilySUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 1..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig55813contigEcto-sp13_S_contig55813:14..882 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig55813.15891.1mRNA_Ecto-sp13_S_contig55813.15891.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig55813 14..888 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig55813.15891.1 ID=prot_Ecto-sp13_S_contig55813.15891.1|Name=mRNA_Ecto-sp13_S_contig55813.15891.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bp
MPDCKFGLNDKLIMERDANARGRQDRRPAVALDDCTFHRCVRLGKFDADR
TITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRGRVTINLKVSADF
SYKLFGSNIVVKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001392Clathrin_mu
IPR028565MHD
IPR018240Clathrin_mu_CS
IPR036168AP2_Mu_C_sf