prot_Ecto-sp13_S_contig11831.1577.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11831.1577.1
Unique Nameprot_Ecto-sp13_S_contig11831.1577.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length754
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11831.1577.1 vs. uniprot
Match: A0A6H5KV34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV34_9PHAE)

HSP 1 Score: 654 bits (1687), Expect = 9.680e-220
Identity = 578/795 (72.70%), Postives = 595/795 (74.84%), Query Frame = 0 
Query:    1 MLAADSGRVDVVRALLRGRHGGFPNAGDTRGYTALHFATMRGSVGIAEALLQGAAGFHKGVRGGVNIGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPD---VTNADGDTALHVAVATRRIGVGQALLRAGASVGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVD--GTESSSXXXXXXXXXXXXXXXXXXXXXXXRTARDKPEGDRRAEIAAVVRVTATVAPRXXXXXXXXXXXXXXXXXXXXXXXAFPNAGRGRCTRVSAAALATSLASPLSKKPSQKRRASTCIAATIRRGGGSPNTRKEGRTPLHFAAMNGRARTAKVLLAAGAPPAHRRNRKXXXXXXXXXXXXXXXXXXXXXXXXXXGGHVDAATAAGDTPLGVALXXXXXDIVVQLLRRGAAVVGRDGKAPCLDIXXXXXXXXXDLTSVLKTLLKDNPAGTGTARVLSAPLHAACRGGGRTLVEALLEKGADINASQDQAGEEEGRRRMLRPLHVAAAHGNAEAVGALTLRGCLLDVKTRDPSG---STPLXXXXXXXXXXXXXXXXXXXXXXXAVPRGQDGKQRATSLARLAADMRRGDMVALLARAIVDRDSSETWAREWAASRGFRVGGLSAATGAVGGAVIGAEXXXXXE-AGTLEQVAATVSRSARAGAAXXXXXXVVGAGEGTGVRKVVQETVS---------------------------------RGERARRRSFLSKGKGGEEVVVLGEARRVGPGRRGPRQRAGL 753
            MLAADSGRVDVVRALLRGRHGGFPNAGDTRGYTALHFATMRGSVGIAEALLQGAAGFHKGV GG N G  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       VTNADGDTALHVAVATRRIGVGQALLRAGASVG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      G++ S+         XXXXXXXXXXXXX R ARDKP GDRRA++AA VRVT      XXXXXXXXXXXXXXXXXXXXXXX   NAGRGRCTRVSAAALATSLASPLSKKPSQKRRAS   AATIRRGGGSPN RKEGRTPLHFAAMNG    A+VLLAAGAPPAHRRNRK                          GGHV+AATAAGDTPLGVAL     DIVVQ++  G     RD KA CLDI         DLT+VLKTL KDNPAG GTARVLSAPLHAACRGGGRTLVEALLEKGAD+NAS+D                        EAVGALTLRGCLLDVKTRDPSG   STPL      XXXXXXXXXX       AVPRGQDGK+RATSLARLAADMRRGDMVALLARAIVDRDSSETWAREWAASRGFRVGGLSAA GAVGGA +GAE     E AGT+E VAATVSRSARAGAA      VVGAG G GVR                                         RGERARRRSFLS+GKGGEEVVVLGEAR +GPGRRGPRQRAGL
Sbjct:  259 MLAADSGRVDVVRALLRGRHGGFPNAGDTRGYTALHFATMRGSVGIAEALLQGAAGFHKGVGGGENNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTNADGDTALHVAVATRRIGVGQALLRAGASVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSDHSANAAGASGRGXXXXXXXXXXXXXGRNARDKPGGDRRAKMAAAVRVTXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXNAGRGRCTRVSAAALATSLASPLSKKPSQKRRASAGTAATIRRGGGSPNRRKEGRTPLHFAAMNGSVGAARVLLAAGAPPAHRRNRKRESPLLLAAKGGHAEVVELLLEALGPGGHVNAATAAGDTPLGVALANGHGDIVVQVIGWGV----RDDKALCLDIGRDDRVPPLDLTNVLKTLPKDNPAGAGTARVLSAPLHAACRGGGRTLVEALLEKGADVNASRDPXXXXXXXXXXX-XXXXXXXXXXXEAVGALTLRGCLLDVKTRDPSGWVSSTPLGIAVQEXXXXXXXXXXDAGAAIDAVPRGQDGKERATSLARLAADMRRGDMVALLARAIVDRDSSETWAREWAASRGFRVGGLSAAAGAVGGADVGAEEEEDGEEAGTVEPVAATVSRSARAGAAGAVGRAVVGAGXGRGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGERARRRSFLSEGKGGEEVVVLGEARTLGPGRRGPRQRAGL 1047
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BLAST of mRNA_Ecto-sp13_S_contig11831.1577.1 vs. uniprot
Match: D7FVK0_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK0_ECTSI)

HSP 1 Score: 652 bits (1683), Expect = 2.070e-219
Identity = 538/765 (70.33%), Postives = 556/765 (72.68%), Query Frame = 0 
Query:    1 MLAADSGRVDVVRALLRGRHGGFPNAGDTRGYTALHFATMRGSVGIAEALLQGAAGFHKGVRGGVNIGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPDVTNADGDTALHVAVATRRIGVGQALLRAGASVGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVDGTESSSXXXXXXXXXXXXXXXXXXXXXXXRTARDKPEGDRRAEIAAVVRVTATVAPRXXXXXXXXXXXXXXXXXXXXXXXAFPNAGRGRCTRVSAAALATSLASPLSKKPSQKRRASTCIAATIRRGGGSPNTRKEGRTPLHFAAMNGRARTAKVLLAAGAPPAHRRNRKXXXXXXXXXXXXXXXXXXXXXXXXXXGGHVDAATAAGDTPLGVALXXXXXDIVVQLLRRGAAVVGRDGKAPCLDIXXXXXXXXXDLTSVLKTLLKDNPAGTGTARVLSAPLHAACRGGGRTLVEALLEKGADINASQDQAGEEEGRRRMLRPLHVAAAHGNAEAVGALTLRGCLLDVKTRDPSGSTPLXXXXXXXXXXXXXXXXXXXXXXXAVPRGQDGKQRATSLARLAADMRRGDMVALLARAIVDRDSSETWAREWAASRGFRVGGLSAATGAVG------------GAVIGAEXXXXXEAGTLEQVAATVSRSARAGAAXXXXXXVVGAGEGTGVRKVVQETVSRGERARRRSFLSKGKGGEEVVVLGEARRVGPGRRGPRQRAGL 753
            MLAADSGRVDVVRALLRGRHGGFPNAGDTRGYTALHFATMRGSVGIAEALLQGAAGF KG  GG N GNG                                                                        DTA                 RAGASVGI       XXXXXXXXXXXXXXXXXXXXXX  AAVDGTESSSXXXXXXXXXXXXXXXXXXXXXXX                            XXXXXXXXXXXXXXXXXXXXXXX  PNAGRGRCTRVSAAALATSLASPLSKKPSQKRRAST  AAT+RRG  SPN RKEGRTPLHFAAMNGR   A+VLLAAGAPPAHRRNRK   XXXXXXXXX              G HVDAATAAG+TPLGVA      D+VVQLLR+GAAVVGRD KAPCLD+  XXXXXXX LTSVLKTLLKDNPAG GTARVLSAPLHAACRGGGRTLVEALLEKGAD+NASQD AGEEEGRRRMLRPLHVAAAHGNAEAVGALTL+GCLLDVKTRDPSGSTPLXXXXXXXXXXXXXXXXXXXXXXXAVPRGQDGK+RATSLARLAADMRRGDMVAL+ARAIVDRDSSETWA EWAASRGFRVGGLSAA G               GAV+GAE     EAGT+E VAATVSR+AR    XXXXXX      GTGV +VVQ TVSR ERA+RRSFLS+GKGGEEV+VLGEARR+ PGRRGPRQR GL
Sbjct:  342 MLAADSGRVDVVRALLRGRHGGFPNAGDTRGYTALHFATMRGSVGIAEALLQGAAGFRKGAGGGENNGNGD-----------------------------------------------------------------------DTAXXXXXXXXXXXXXXXXXRAGASVGIANGLGHTXXXXXXXXXXXXXXXXXXXXXXDVAAVDGTESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPNAGRGRCTRVSAAALATSLASPLSKKPSQKRRASTGTAATVRRGVASPNRRKEGRTPLHFAAMNGRVGAARVLLAAGAPPAHRRNRKRESXXXXXXXXXHAEVVELLLEALRPGTHVDAATAAGETPLGVASANGHDDVVVQLLRKGAAVVGRDDKAPCLDLGWXXXXXXXXLTSVLKTLLKDNPAGAGTARVLSAPLHAACRGGGRTLVEALLEKGADVNASQDPAGEEEGRRRMLRPLHVAAAHGNAEAVGALTLQGCLLDVKTRDPSGSTPLXXXXXXXXXXXXXXXXXXXXXXXAVPRGQDGKERATSLARLAADMRRGDMVALMARAIVDRDSSETWAIEWAASRGFRVGGLSAAAGXXXXXXXXXXXXXXXGAVVGAEEEE--EAGTVEPVAATVSRNARXXXXXXXXXXXXXX-XGTGVGRVVQATVSRSERAQRRSFLSEGKGGEEVLVLGEARRLAPGRRGPRQRTGL 1026
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11831.1577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KV34_9PHAE9.680e-22072.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVK0_ECTSI2.070e-21970.33Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 342..357
score: 43.42
coord: 497..511
score: 44.41
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 523..552
e-value: 250.0
score: 9.5
coord: 341..370
e-value: 0.002
score: 27.4
coord: 174..203
e-value: 0.034
score: 23.3
coord: 481..510
e-value: 0.089
score: 21.9
coord: 558..587
e-value: 0.0022
score: 27.2
coord: 411..441
e-value: 4.4
score: 16.3
coord: 30..59
e-value: 0.23
score: 20.5
coord: 375..407
e-value: 0.12
score: 21.5
coord: 141..170
e-value: 0.38
score: 19.8
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 31..54
e-value: 0.025
score: 15.0
IPR002110Ankyrin repeatPFAMPF13606Ank_3coord: 485..510
e-value: 0.0014
score: 19.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 485..513
score: 11.247
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 174..206
score: 12.449
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 411..443
score: 10.312
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 30..55
score: 9.057
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 141..173
score: 10.98
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 375..397
score: 10.072
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 341..373
score: 12.102
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 558..590
score: 11.728
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 111..217
e-value: 9.1E-16
score: 59.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 457..638
e-value: 2.6E-24
score: 87.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..107
e-value: 8.1E-10
score: 40.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 318..453
e-value: 1.5E-26
score: 94.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 338..588
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..206
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 133..203
e-value: 1.9E-7
score: 31.6
coord: 528..618
e-value: 1.0E-6
score: 29.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..590
score: 54.619
NoneNo IPR availablePFAMPF13637Ank_4coord: 342..396
e-value: 9.7E-10
score: 38.8
NoneNo IPR availablePANTHERPTHR24193:SF116ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM Dcoord: 526..659
coord: 331..431
coord: 377..512
NoneNo IPR availablePANTHERPTHR24193:SF116ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM Dcoord: 110..395
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 110..395
coord: 331..431
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 526..659
coord: 377..512

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11831contigEcto-sp13_S_contig11831:1277..5059 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11831.1577.1mRNA_Ecto-sp13_S_contig11831.1577.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11831 48..5122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11831.1577.1 ID=prot_Ecto-sp13_S_contig11831.1577.1|Name=mRNA_Ecto-sp13_S_contig11831.1577.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=754bp
MLAADSGRVDVVRALLRGRHGGFPNAGDTRGYTALHFATMRGSVGIAEAL
LQGAAGFHKGVRGGVNIGNGNGDSGVVSVVTAGAGAGAGATAAAAKGAGA
VDAAAAATAAAAAASAGSPAAAAATAPQPPAAADPDVTNADGDTALHVAV
ATRRIGVGQALLRAGASVGIANGLGHTPLHFAAALGLSGFAKELLNRGAD
VAAVDGTESSSSANAAGASGGGGGGGVIVSSAGGRTARDKPEGDRRAEIA
AVVRVTATVAPRRKSSSATSTPSAAAAVAAAAAAAAFPNAGRGRCTRVSA
AALATSLASPLSKKPSQKRRASTCIAATIRRGGGSPNTRKEGRTPLHFAA
MNGRARTAKVLLAAGAPPAHRRNRKGESPLLLAAKGGHAEVVELLLEALG
PGGHVDAATAAGDTPLGVALANGHGDIVVQLLRRGAAVVGRDGKAPCLDI
GRDDKVPPLDLTSVLKTLLKDNPAGTGTARVLSAPLHAACRGGGRTLVEA
LLEKGADINASQDQAGEEEGRRRMLRPLHVAAAHGNAEAVGALTLRGCLL
DVKTRDPSGSTPLGIAVQEGHLEAARALVDAGAAIDAVPRGQDGKQRATS
LARLAADMRRGDMVALLARAIVDRDSSETWAREWAASRGFRVGGLSAATG
AVGGAVIGAEEEEEEEAGTLEQVAATVSRSARAGAAGAVGRAVVGAGEGT
GVRKVVQETVSRGERARRRSFLSKGKGGEEVVVLGEARRVGPGRRGPRQR
AGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom