prot_Ecto-sp13_S_contig11800.1554.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11800.1554.1
Unique Nameprot_Ecto-sp13_S_contig11800.1554.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length448
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11800.1554.1 vs. uniprot
Match: D7FMP7_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMP7_ECTSI)

HSP 1 Score: 472 bits (1214), Expect = 3.360e-155
Identity = 353/369 (95.66%), Postives = 357/369 (96.75%), Query Frame = 0 
Query:   19 RGPEAAAANMALNSREMLSASTYPIVPPFTTNEEVSAPPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXXXXXXPLPALPGIGTDHLGRAAAPAAGTPDSGPAKKRRRGSDGSATPTSGPGVDAYEASSAXXXXXXXXXXXXXXXXXXSTVQYADQAAYHAALSSEMMAGLMPSMMQPIGELPXXXXXXXXXXXXXXXXXXXXXXLSSAEALAHGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMLSSPDAFVMAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLPLVAPPENGTAAAGEGIMLLAGAVASHTDH 387
            RGPEAAAANMALNSREMLSASTYPIVPPFTTNEEV+APPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXX    PLPALPGIGT+HLGRA APAAGTPDSGPAKKRRRGSDGSATPTSGPGVDAYEASSA XXXXXXXXXXXXX    STVQYAD AAYHAALSSEMMAGLMPSMMQ IGELPXXXXXXXXXXXXXXXXXXXXXXLSSAEALAHGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+AMLSSP+AFVMAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLPLVAPPENGTAAAGEGIMLLAGAVASHTDH
Sbjct:  471 RGPEAAAANMALNSREMLSASTYPIVPPFTTNEEVAAPPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXXP---PLPALPGIGTEHLGRAVAPAAGTPDSGPAKKRRRGSDGSATPTSGPGVDAYEASSAAXXXXXXXXXXXXX----STVQYADHAAYHAALSSEMMAGLMPSMMQTIGELPXXXXXXXXXXXXXXXXXXXXXXLSSAEALAHGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMLSSPEAFVMAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLPLVAPPENGTAAAGEGIMLLAGAVASHTDH 832
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BLAST of mRNA_Ecto-sp13_S_contig11800.1554.1 vs. uniprot
Match: A0A6H5KYH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH5_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 3.040e-131
Identity = 326/355 (91.83%), Postives = 333/355 (93.80%), Query Frame = 0 
Query:   19 RGPEAAAANMALNSREMLSASTYPIVPPFTTNEEVSAPPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXXXXXXPLPALPGIGTDHLGRAAA------PAAGTPDSGPAKKRRRGSDGSATPTSGPGVDAYEASSAXXXXXXXXXXXXXXXXXXSTVQYADQAAYHAALSSEMMAGLMPSMMQPIGELPXXXXXXXXXXXXXXXXXXXXXXLSSAEALAHGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMLSSPDAFVMAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLPLVAPPENGT 367
            RGPEAAAANMALNSREMLSASTYPIVPPFTTNEE++APPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXXX   PLPALPGIGT+HLGRAAA            DSGPAKKRRRGSDGSATPTSGPGVDAYEASS    XXXXXXXXXXXXXXX  VQ+ADQAAYHAALSSEMMAGLMPSMMQPIGELPXXXXXXXXXXXXXXXXXXXXXXLSSA+AL HGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+AMLSSP+AFVMAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLPLVAPPENGT
Sbjct:  531 RGPEAAAANMALNSREMLSASTYPIVPPFTTNEEMAAPPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXXXFSPPLPALPGIGTEHLGRAAALPXXXXXXXXXXDSGPAKKRRRGSDGSATPTSGPGVDAYEASSVAAAXXXXXXXXXXXXXXXX-VQFADQAAYHAALSSEMMAGLMPSMMQPIGELPXXXXXXXXXXXXXXXXXXXXXXLSSADALVHGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMLSSPEAFVMAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLPLVAPPENGT 884
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11800.1554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMP7_ECTSI3.360e-15595.66EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KYH5_9PHAE3.040e-13191.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..447
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11800contigEcto-sp13_S_contig11800:71..4319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11800.1554.1mRNA_Ecto-sp13_S_contig11800.1554.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11800 44..4319 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11800.1554.1 ID=prot_Ecto-sp13_S_contig11800.1554.1|Name=mRNA_Ecto-sp13_S_contig11800.1554.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=448bp
MRQESAAAAAIEAAAASSRGPEAAAANMALNSREMLSASTYPIVPPFTTN
EEVSAPPGMSITSAELALAFSGLPEDDMHSAAAAAHAAHAAAAAAAAAAA
VGAPGFSPPLPALPGIGTDHLGRAAAPAAGTPDSGPAKKRRRGSDGSATP
TSGPGVDAYEASSAAAAMAAAAASAAAAAAPASTVQYADQAAYHAALSSE
MMAGLMPSMMQPIGELPPPPPQPAAAPQDDAAAAQPPPPLSSAEALAHGF
VPVPMVSTAPAPMDTSGPPPPMMSAGPPPAASAAPPAGAQAMLSSPDAFV
MAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAAD
ADRVAPLPLVAPPENGTAAAGEGIMLLAGAVASHTDHNDDDDDDDDEEEE
GAEEEQAPPDAATTAAAAAAAAAAAAATATAAPEPAAAPAPPAVPAS*
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