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Homology
BLAST of mRNA_Ecto-sp13_S_contig11800.1554.1 vs. uniprot
Match: D7FMP7_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMP7_ECTSI) HSP 1 Score: 487 bits (1253), Expect = 6.870e-161 Identity = 378/395 (95.70%), Postives = 382/395 (96.71%), Query Frame = 1
Query: 4 AGTPEEKRMRQXXXXXXXXXXXXXXXRGPEAAAANMALNSREMLSASTYPIVPPFTTNEEVSAPPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXXXXXXPLPALPGIGTDHLGRAAAPAAGTPDSGPAKKRRRGSDGSATPTSGPGVDAYEASSAXXXXXXXXXXXXXXXXXXSTVQYADQAAYHAALSSEMMAGLMPSMMQPIGELPXXXXXXXXXXXXXXXXXXXXXXLSSAEALAHGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMLSSPDAFVMAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLPLVAPPENGTAAAGEGIMLLAGAVASHTDH 1188
AGTPEEKRMR XXXXXXXXXXXXXXXRGPEAAAANMALNSREMLSASTYPIVPPFTTNEEV+APPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXX PLPALPGIGT+HLGRA APAAGTPDSGPAKKRRRGSDGSATPTSGPGVDAYEASSA XXXXXXXXXXXXX STVQYAD AAYHAALSSEMMAGLMPSMMQ IGELPXXXXXXXXXXXXXXXXXXXXXXLSSAEALAHGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+AMLSSP+AFVMAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLPLVAPPENGTAAAGEGIMLLAGAVASHTDH
Sbjct: 445 AGTPEEKRMRXXXXXXXXXXXXXXXXRGPEAAAANMALNSREMLSASTYPIVPPFTTNEEVAAPPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXXP---PLPALPGIGTEHLGRAVAPAAGTPDSGPAKKRRRGSDGSATPTSGPGVDAYEASSAAXXXXXXXXXXXXX----STVQYADHAAYHAALSSEMMAGLMPSMMQTIGELPXXXXXXXXXXXXXXXXXXXXXXLSSAEALAHGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMLSSPEAFVMAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLPLVAPPENGTAAAGEGIMLLAGAVASHTDH 832
BLAST of mRNA_Ecto-sp13_S_contig11800.1554.1 vs. uniprot
Match: A0A6H5KYH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH5_9PHAE) HSP 1 Score: 428 bits (1101), Expect = 7.380e-137 Identity = 351/381 (92.13%), Postives = 358/381 (93.96%), Query Frame = 1
Query: 4 AGTPEEKRMRQXXXXXXXXXXXXXXXRGPEAAAANMALNSREMLSASTYPIVPPFTTNEEVSAPPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXXXXXXPLPALPGIGTDHLGRAAA------PAAGTPDSGPAKKRRRGSDGSATPTSGPGVDAYEASSAXXXXXXXXXXXXXXXXXXSTVQYADQAAYHAALSSEMMAGLMPSMMQPIGELPXXXXXXXXXXXXXXXXXXXXXXLSSAEALAHGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMLSSPDAFVMAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLPLVAPPENGT 1128
AGTPEEKRMR XXXXXXXXXXXXXXXRGPEAAAANMALNSREMLSASTYPIVPPFTTNEE++APPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXXX PLPALPGIGT+HLGRAAA DSGPAKKRRRGSDGSATPTSGPGVDAYEASS XXXXXXXXXXXXXXX VQ+ADQAAYHAALSSEMMAGLMPSMMQPIGELPXXXXXXXXXXXXXXXXXXXXXXLSSA+AL HGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+AMLSSP+AFVMAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLPLVAPPENGT
Sbjct: 505 AGTPEEKRMRXXXXXXXXXXXXXXXXRGPEAAAANMALNSREMLSASTYPIVPPFTTNEEMAAPPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXXXFSPPLPALPGIGTEHLGRAAALPXXXXXXXXXXDSGPAKKRRRGSDGSATPTSGPGVDAYEASSVAAAXXXXXXXXXXXXXXXX-VQFADQAAYHAALSSEMMAGLMPSMMQPIGELPXXXXXXXXXXXXXXXXXXXXXXLSSADALVHGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMLSSPEAFVMAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLPLVAPPENGT 884
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 479.2 |
| Seed ortholog evalue | 2.1e-132 |
| Seed eggNOG ortholog | 2880.D7FMP7 |
| Model size | 1371 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| EggNOG OGs | 29ZCP@1,2RXW0@2759 |
| Ec32 ortholog description | EsV-1-7 domain protein |
| Ec32 ortholog | Ec-23_001120.1 |
| Cds size | 1344 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462622.8368711-UTR-Ecto-sp13_S_contig11800:43..70 | 1681462622.8368711-UTR-Ecto-sp13_S_contig11800:43..70 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig11800 44..70 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462622.8462808-CDS-Ecto-sp13_S_contig11800:70..174 | 1681462622.8462808-CDS-Ecto-sp13_S_contig11800:70..174 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig11800 71..174 + |
| 1681462622.8573701-CDS-Ecto-sp13_S_contig11800:490..1349 | 1681462622.8573701-CDS-Ecto-sp13_S_contig11800:490..1349 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig11800 491..1349 + |
| 1681462622.8674655-CDS-Ecto-sp13_S_contig11800:2115..2247 | 1681462622.8674655-CDS-Ecto-sp13_S_contig11800:2115..2247 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig11800 2116..2247 + |
| 1681462622.8775883-CDS-Ecto-sp13_S_contig11800:4070..4319 | 1681462622.8775883-CDS-Ecto-sp13_S_contig11800:4070..4319 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig11800 4071..4319 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11800.1554.1 >prot_Ecto-sp13_S_contig11800.1554.1 ID=prot_Ecto-sp13_S_contig11800.1554.1|Name=mRNA_Ecto-sp13_S_contig11800.1554.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=448bp
MRQESAAAAAIEAAAASSRGPEAAAANMALNSREMLSASTYPIVPPFTTN EEVSAPPGMSITSAELALAFSGLPEDDMHSAAAAAHAAHAAAAAAAAAAA VGAPGFSPPLPALPGIGTDHLGRAAAPAAGTPDSGPAKKRRRGSDGSATP TSGPGVDAYEASSAAAAMAAAAASAAAAAAPASTVQYADQAAYHAALSSE MMAGLMPSMMQPIGELPPPPPQPAAAPQDDAAAAQPPPPLSSAEALAHGF VPVPMVSTAPAPMDTSGPPPPMMSAGPPPAASAAPPAGAQAMLSSPDAFV MAGAVVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAAD ADRVAPLPLVAPPENGTAAAGEGIMLLAGAVASHTDHNDDDDDDDDEEEE GAEEEQAPPDAATTAAAAAAAAAAAAATATAAPEPAAAPAPPAVPAS* back to topmRNA from alignment at Ecto-sp13_S_contig11800:44..4319+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig11800.1554.1 ID=mRNA_Ecto-sp13_S_contig11800.1554.1|Name=mRNA_Ecto-sp13_S_contig11800.1554.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4276bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11800:44..4319+ (Ectocarpus species13 EcNAP12_S_4_19m) CAGGCGGGGACCCCCGAGGAGAAGAGGATGCGGCAGGAGTCGGCAGCGGC
CGCAGCGATCGAGGCGGCGGCAGCAAGCTCTCGCGGCCCCGAAGCCGCGG
CGGCTAATATGGCGCTCAACTCCAGGGAAATGTGAGTTCGGTCCAAGGTT
AAGGTTCATCAGGCTAAGCGATGCCCGGCAAGTGGCACAGGGACAGCATG
TCAAACAACAGGACACATTGCCCAGGGATGGATGTGGGGCACAGTTGAGC
TTGTCGTATATTGTGTTTCCAGATGCAACCCACCCCCCCCGACCTTGTAG
GTCGCAAGCAAAGATGTGCGCGCATGTAACGGGCTCTATTCGAAGCGCCT
TTCCTCTTGTCTCTTTACCCCCCCCCACCCCTCCGTCCCCTCGTCCCCCC
GTCCCCCCGTCCCCCCTCCCCCCTCCCCCCTGCCCCACCACTTTCAGGCT
CTCCGCCAGCACGTACCCCATCGTTCCCCCCTTCACCACCAACGAGGAAG
TGTCGGCCCCCCCTGGGATGTCCATCACCTCTGCCGAGCTCGCGCTGGCC
TTCTCCGGTCTCCCGGAGGACGACATGCACTCCGCTGCCGCCGCCGCGCA
CGCGGCGCACGCCGCGGCCGCCGCAGCCGCCGCAGCCGCCGCAGTCGGCG
CCCCGGGCTTCTCGCCCCCGCTCCCCGCCCTCCCTGGCATCGGAACGGAT
CACCTCGGGCGAGCCGCTGCGCCGGCAGCCGGAACCCCGGACTCCGGCCC
GGCGAAGAAGAGGCGCCGCGGATCGGACGGAAGCGCCACCCCCACCTCCG
GCCCCGGTGTGGACGCGTACGAAGCTTCGTCGGCAGCGGCTGCGATGGCG
GCGGCGGCGGCATCGGCGGCGGCTGCTGCGGCTCCGGCCTCGACCGTGCA
GTACGCGGACCAGGCCGCCTACCACGCGGCGCTGAGCTCCGAGATGATGG
CGGGTTTGATGCCCTCGATGATGCAGCCGATCGGCGAGCTGCCGCCGCCA
CCGCCGCAGCCAGCGGCGGCACCGCAAGACGATGCGGCGGCGGCGCAGCC
GCCGCCGCCGCTGTCTTCGGCTGAGGCTCTGGCGCACGGGTTCGTGCCGG
TGCCCATGGTGTCGACGGCGCCGGCGCCGATGGACACCTCGGGGCCGCCA
CCGCCGATGATGTCCGCGGGACCCCCCCCTGCCGCTTCCGCTGCTCCCCC
CGCGGGTGCGCAGGCCATGCTGTCTTCGCCCGACGCCTTCGTGATGGCGG
GCGCGGTGGTGCCGGCGATCGGGAGCAAGTGCGCTGTCGCGGATTGCGCG
GCACCGGTGAGTTCCTTTTTTTTTCACTCAATGAATCCGTCTCTATCCAC
AGATGATGAGAGTCCAGGATGAGCTAGCGGTGAGTGTTTCGTTTTTTGCT
GGGAGAAGAATAGGTCGTGCGTGTGTGTGTGTGTGTGTGTTGTCAGTTGC
GTCGACCGAGCAAACCGGCTGACCAATGAAAAGACTTCAGTCTTGTTGTA
GCGGGTTAACATATCGTGTGTGTGAGGTTTTGGACTATAGCAGAGGTTGG
GGTTTGGTCTCCTCTTCTTTCTCGAGCGTTGGTGCGGGCCCAAGCAGGTA
AACGCCCGATGTACAACCAGAGAAAGGCTTTATGCACCTCCAGCTGCATC
CACGGCTCGCACCATTTTTGAAATTTCGACGCCTGCTGTGGACGGGAGAG
AAGCCCGTCCTACCCCAGGTTTTTGGTTGGTAGTGTGACCGCGACATGTC
ATCCCCAAAACGTGATTTGGTCGTTTTGACTATGAGTTGGTCATTCGGAC
CGGACCGTCGTGACGTCGTATCCCAAACGAGTGCTTTTTGTCAATTTGGA
GCTTCGCGACGCCTTCCGGAACGCGTGATTTTGTCGATTATATCTTCGCG
ACGCCACATCCTAAACGAGCACCGTGTTATAATGGAGTACCGTTGGCCTC
GTCAATTGTTGTGTTCTTCGTCCTCATGCACTTGTCTCCTTCCCTTCCCT
TTCCCCGTCCCCCCACCCAACTATATTGTCTCCCGGCTCCTGCCTGCGGG
GGGGGTTCCGCAAAATGAACAGGCTACTTTCGGGCACCCTGGACCGGGCC
ACGTCCCGACGCATTGCTTGACCCATTGCGAGGAGGGCATGCACAGGCTA
GCGGCGGACGCGGACAGAGTTGCTCCCCTCCCGCTGGTTGCGCCGCCCGA
AAACGTGAGCAGAGTTAACACCCGAGTACACGGTGGTCGTGTGCGTGTGT
GTGTCTTTGTTGTTGGCATCGGCCTCGCTATCCGGCTGGTCAATGAAAAT
ACGTCGATCTCAGTACGGGGGAGGCAGAGAATGCCTCCAAAGGCCAGGGT
GTTTTTGCGTTCGCCTTGTCTAATACGGCGTGAGTTCGTGTGTTCGTTGT
CTTTGTGACGTGTCAGCCGGGGTAACGCAGGAGAAAGGTGATGCACGACT
ATTTTTTTTTTTTTGTCGTGCATGGGTTCAGTGTGGAATACCATGCAATC
ACAGTTCTTCCACCGGGACCTGATGAACATCGAATGTGGTTCTGGAGGGC
TACCGTCGAGACCCCTTGCTTGGGATGTGTGACGTCGGATTTTCATGGCT
CTTGATGTGGTACCCACGTTATCTAGGCTTATGCGAGGCCGCATCTATTA
ATCTAGCCGAGACACACCCATACATGTGGGAACAGCCGCTGTTTGTTTCC
CATTCAGGAGCTCGTTGCCCACCTCGTACATGCTGTCAGGAGGAACAGTC
GCACAGTTTATCGACACGTTGATCATGTGGGCTTTTTCGTTGTAGACTCT
CTACTCCCCCTTCGGGGCAGGCGTTTCGTCCCCAACCTTAGTTACGCTCT
TGGTCATCTCGTTCGAAAGTGGTTCGTTTGTCTGCCGCAGGGCACGGGCA
GGCGTTTTCCGCTTCTTTTTTTTTTATATCTACCCTTCCCTGTGCTCTTT
GTCTTCTCGTTCGAACATGGTTCGTTGGTCTATTGCAGGGCACGAGCAGC
GTCCCCTCCGCTGAGCCAGCAGAGGCAGCAGCAGCAGCAGCGGCAGCAGC
GGAGGCGGAGGCGGCGGTGGCGGTGGCGGCGGCAGCGGCAGAGGCGTCGG
CCGCTGCGGCGGCTGAGGCGGCTGCGGCGGCTCCCGTGGCATCGCTTGAA
GCTGCTGCCACCGCCGAGCCCCCACCCGTTCCGATGAAGGTAGAAGAGAC
GGGGAAGGTCAAGAAGAACAAGAAGAAGGTGCGTCGTCGTTGTTGTTGTT
GTTGTGTCGTTCGTCAGTGTCGTGGGACTTTTGTGCCCCGCCCGATCATA
AAAGATGGTGCCGCGAGCTCTTTTTTACCCCAAGCCAAGCCGCAGAAGGC
CCGGCGAAATCTCTTGTTTTTACGTCCCCTACTTTACCACCCGAGGGCTC
ACCCCGTTTGTGCGCGGCGAAGGCAACCTTGCCGTAGGCGTGTGGACTGC
GCACGACGGGAAGGCAAACACGTAGGGGGTGGCGGTGGCGGTACGGGTTG
TGGTGTGCTGTCCGGTGACCTGTCCTTACTGGCGGCACCTGTAGAGGGAA
AGCTAAAGCCAATCCGTGTGCCGTCGTTTCACGGCTGTCGTTCTAGTCAG
CTGTACATTCTCATTTGTCGGACTCAGGTCTTTTCTAGGGGGCTGTCGCG
TTCACCCTGACCCGTGTCGTCGTCGCACACCCGCGTTCCCTCCCGCACCC
TCGTCATGCCGACCCAACCACCGGCAGTCTGAAGTTTTGGTTTTGCGGCG
GGCAAGGGAAATGCCCTCTCTCTGTGTGTTTGTCTGTCTGTCTGTCTATG
TGTCTCTCTATCATTCTGTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTTTATATCTAT
CTGCCTGACGCTCAAATATTTCCACCAAGGCGTACAACACTACCGCGGTT
ACTCCGGAGATATTTTTTGCATGCATGCATTTCGCTGGCATCTCTATCCC
CTCCTCCCTTTCCCTCCTCCTTTTCAGGGAACAGCAGCCGCCGGCGAGGG
CATCATGCTCTTGGCAGGCGCGGTCGCCAGCCACACCGACCACAATGACG
ACGATGACGACGACGACGACGAAGAGGAGGAGGGAGCGGAGGAGGAACAG
GCTCCACCCGACGCCGCCACCACTGCCGCCGCAGCTGCAGCCGCAGCCGC
AGCCGCAGCCGCAACCGCAACAGCAGCACCAGAACCAGCAGCGGCTCCCG
CCCCTCCGGCGGTACCCGCCTCCTGA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig11800:44..4319+ >mRNA_Ecto-sp13_S_contig11800.1554.1 ID=mRNA_Ecto-sp13_S_contig11800.1554.1|Name=mRNA_Ecto-sp13_S_contig11800.1554.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1344bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11800:44..4319+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGCGGCAGGAGTCGGCAGCGGCCGCAGCGATCGAGGCGGCGGCAGCAAG CTCTCGCGGCCCCGAAGCCGCGGCGGCTAATATGGCGCTCAACTCCAGGG AAATGCTCTCCGCCAGCACGTACCCCATCGTTCCCCCCTTCACCACCAAC GAGGAAGTGTCGGCCCCCCCTGGGATGTCCATCACCTCTGCCGAGCTCGC GCTGGCCTTCTCCGGTCTCCCGGAGGACGACATGCACTCCGCTGCCGCCG CCGCGCACGCGGCGCACGCCGCGGCCGCCGCAGCCGCCGCAGCCGCCGCA GTCGGCGCCCCGGGCTTCTCGCCCCCGCTCCCCGCCCTCCCTGGCATCGG AACGGATCACCTCGGGCGAGCCGCTGCGCCGGCAGCCGGAACCCCGGACT CCGGCCCGGCGAAGAAGAGGCGCCGCGGATCGGACGGAAGCGCCACCCCC ACCTCCGGCCCCGGTGTGGACGCGTACGAAGCTTCGTCGGCAGCGGCTGC GATGGCGGCGGCGGCGGCATCGGCGGCGGCTGCTGCGGCTCCGGCCTCGA CCGTGCAGTACGCGGACCAGGCCGCCTACCACGCGGCGCTGAGCTCCGAG ATGATGGCGGGTTTGATGCCCTCGATGATGCAGCCGATCGGCGAGCTGCC GCCGCCACCGCCGCAGCCAGCGGCGGCACCGCAAGACGATGCGGCGGCGG CGCAGCCGCCGCCGCCGCTGTCTTCGGCTGAGGCTCTGGCGCACGGGTTC GTGCCGGTGCCCATGGTGTCGACGGCGCCGGCGCCGATGGACACCTCGGG GCCGCCACCGCCGATGATGTCCGCGGGACCCCCCCCTGCCGCTTCCGCTG CTCCCCCCGCGGGTGCGCAGGCCATGCTGTCTTCGCCCGACGCCTTCGTG ATGGCGGGCGCGGTGGTGCCGGCGATCGGGAGCAAGTGCGCTGTCGCGGA TTGCGCGGCACCGGCTACTTTCGGGCACCCTGGACCGGGCCACGTCCCGA CGCATTGCTTGACCCATTGCGAGGAGGGCATGCACAGGCTAGCGGCGGAC GCGGACAGAGTTGCTCCCCTCCCGCTGGTTGCGCCGCCCGAAAACGGAAC AGCAGCCGCCGGCGAGGGCATCATGCTCTTGGCAGGCGCGGTCGCCAGCC ACACCGACCACAATGACGACGATGACGACGACGACGACGAAGAGGAGGAG GGAGCGGAGGAGGAACAGGCTCCACCCGACGCCGCCACCACTGCCGCCGC AGCTGCAGCCGCAGCCGCAGCCGCAGCCGCAACCGCAACAGCAGCACCAG AACCAGCAGCGGCTCCCGCCCCTCCGGCGGTACCCGCCTCCTGA back to top
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