prot_Ecto-sp13_S_contig101133.143.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig101133.143.1
Unique Nameprot_Ecto-sp13_S_contig101133.143.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length160
Homology
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BLAST of mRNA_Ecto-sp13_S_contig101133.143.1 vs. uniprot
Match: UPI0014223FCA (hypothetical protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI0014223FCA)

HSP 1 Score: 257 bits (656), Expect = 1.450e-78
Identity = 142/160 (88.75%), Postives = 150/160 (93.75%), Query Frame = 0 
Query:    1 LAARGAGSGQQVDLGRAAMTGTFGMGFEGALMAFQRIPGLRAVFGNPALYRQGSGLTDRGRAILRESGINPDEFSPAMAEQFAAAARQTDDVAAAARQAEAQTLPSPVTLSGAQASRNPTAMALESEAKKGVLGPENQSLLLDTQAQQQAALRGNIPAIQ 160
            LAARGAGSGQQVDLGRAAMTG  GMGFEGALMA QRIPGLRAVFG+PALYRQGSGLTDRGR ILR+SGINPDE SPAMA+Q +A ARQTDDVAAAARQAEAQTLP+PV+L+GAQA+RNPTAMALE EAKKGVLG E QSLLLDTQAQQQAALRGNIPAIQ
Sbjct:  219 LAARGAGSGQQVDLGRAAMTGATGMGFEGALMALQRIPGLRAVFGSPALYRQGSGLTDRGRNILRDSGINPDEISPAMADQLSAIARQTDDVAAAARQAEAQTLPNPVSLTGAQAARNPTAMALEGEAKKGVLGQEAQSLLLDTQAQQQAALRGNIPAIQ 378
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig101133.143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0014223FCA1.450e-7888.75hypothetical protein n=1 Tax=Pelagibius litoralis ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig101133contigEcto-sp13_S_contig101133:26..505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig101133.143.1mRNA_Ecto-sp13_S_contig101133.143.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig101133 26..505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig101133.143.1 ID=prot_Ecto-sp13_S_contig101133.143.1|Name=mRNA_Ecto-sp13_S_contig101133.143.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp
LAARGAGSGQQVDLGRAAMTGTFGMGFEGALMAFQRIPGLRAVFGNPALY
RQGSGLTDRGRAILRESGINPDEFSPAMAEQFAAAARQTDDVAAAARQAE
AQTLPSPVTLSGAQASRNPTAMALESEAKKGVLGPENQSLLLDTQAQQQA
ALRGNIPAIQ
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