prot_Ecto-sp13_S_contig10103.136.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10103.136.1
Unique Nameprot_Ecto-sp13_S_contig10103.136.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length615
Homology
BLAST of mRNA_Ecto-sp13_S_contig10103.136.1 vs. uniprot
Match: A0A6H5JR78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR78_9PHAE)

HSP 1 Score: 903 bits (2334), Expect = 1.590e-310
Identity = 503/613 (82.06%), Postives = 533/613 (86.95%), Query Frame = 0
Query:    2 RQRLGRHFALAWVIQRAARSRQRQISAFWHWRLAPAPATAPILRQREWEESIGSGAVVAETAPRRQDASAEPATARVEEDRQDLPDAATDSEVDSSTIATATAPQAAVTTLAEDLRTQPEPAASDEVGQEEGEAPHCGTWTVADRVQDLERKEEEVRSQSEDEKVRRKASSGQREGLRTAAQEDAKKAPSGRTPEDAAAGGTSGX----GGDGLRTPVLREEISDRFSSAPARASSPVCRGHSSPQTGETGFATARGGGGAGYVPDATRQTEGVETPMTSSSAPPMSDVRGLSPQVLEGLSASNMTSATGESELQEPPSAAASSSHMNDIGDTLPERAGTGSHAGIDGDRAGSRPEAIRTSEIRLPYQGETADAVRDFLPFFRDHFDVTIRRVPLESAVNITGKAEDGVVNVAAECFEHGLRVCRDNDVKAADFLLLRARVRSARDPDGSQYLLPLEVSAKLRRRLRDLGDRYGVVINSVPSRSVGLGSXXXXXXXXXXXLPQYLCCPRVDTDDDTQDHRKVVQIWGLRNCVIGAFDRVVASLLDHMEYVVKLGPVGADERKRLRFKGKNVNYVVEGGVTEVRISGRPHLAAGNISTVLQSLPERLPNQVQCV 610
            R+RLGRHFAL WVIQR ARS QRQISAFW WRLAPAPATAPILRQREWEESIGSGAVVAETAPRR+DASAEPATARVE                      A  PQAAVTTLA DLRTQPE AASD+  +E+GEAPHCGT TVADRVQ LER+EEEVRSQ EDEK R KA SGQREGLRTAAQE+AK+APSGRTPED A  G+S      GGDGLR  VL+EE SDRF+SAPA A SPVCRGHSSP+TGETGFA ARGGGGAG VPDATRQT+G ETPMT SSAPPM+D+RG SPQVLEGLSASNMTSATG+SELQ PPSAAASSS+MND+GDTLPERAG GSHAGIDGDR GSRPEAIRTS++RLPYQGETADAVRDFLPFFRDHFDVTIR VP ESAV I GKA DGVVNVAAECFEHGLR+CRDNDVKAADFLLLRARVRS RDPDGSQYLLPLEVSAKLRR+LRDLGDRYGVVIN VPSRS GLGS XXXXXXXX  LP+Y+CCPRVDT+D+TQDHRKVVQIWGLRNCV+GAFDRVVASLLD+ EYVVKLGPVGADE K LRFKGKNVN   EGGVTEVRISGRPHLA  NISTVLQS+PE LP+QVQCV
Sbjct:  847 RKRLGRHFALGWVIQRVARSHQRQISAFWRWRLAPAPATAPILRQREWEESIGSGAVVAETAPRRRDASAEPATARVEXXXXXXXXXXXXXXXXXXXXXXA--PQAAVTTLAADLRTQPESAASDDAREEKGEAPHCGTRTVADRVQHLERREEEVRSQREDEKARGKAPSGQREGLRTAAQENAKQAPSGRTPEDGAGAGSSDGXXXDGGDGLRASVLKEESSDRFASAPAPAPSPVCRGHSSPRTGETGFAAARGGGGAGCVPDATRQTKGGETPMTGSSAPPMNDIRGSSPQVLEGLSASNMTSATGDSELQGPPSAAASSSNMNDLGDTLPERAGNGSHAGIDGDRTGSRPEAIRTSDLRLPYQGETADAVRDFLPFFRDHFDVTIRNVPSESAVCI-GKAPDGVVNVAAECFEHGLRLCRDNDVKAADFLLLRARVRSTRDPDGSQYLLPLEVSAKLRRKLRDLGDRYGVVINGVPSRSEGLGSGXXXXXXXX--LPKYVCCPRVDTEDNTQDHRKVVQIWGLRNCVVGAFDRVVASLLDNTEYVVKLGPVGADELKGLRFKGKNVNCFTEGGVTEVRISGRPHLADANISTVLQSMPEVLPDQVQCV 1454          
BLAST of mRNA_Ecto-sp13_S_contig10103.136.1 vs. uniprot
Match: D7FTQ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ8_ECTSI)

HSP 1 Score: 809 bits (2090), Expect = 6.630e-277
Identity = 470/617 (76.18%), Postives = 498/617 (80.71%), Query Frame = 0
Query:    1 SRQRLGRHFALAWVIQRAARSRQRQISAFWHWRLAPAPATAPILRQREWEESIGSGAVVAETAPRRQDASAEPATARVEEDRQDLPDAATDSEVDSSTIATATAPQAAVTTLAEDLRTQPEPAASDEVGQEEGEAPHCGTWTVADRVQDLERKEEE-VRSQSEDEKVRRKASSGQREGLRTAAQEDAKKAPSGRTPEDAAAGGTSGXGGDGLRTPVLREEISDRFSSAPARASSPVCRGHSSPQTGETGFATARGGGGAGYVPDATRQTEGVETPMTSSSAPPMSDVRGLSPQVLEGLSASNMTSATGESELQEPPSAAASSSHMNDIGDTLPERAGTGSHAGIDGDRAGSRPEAIRTSEIRLPYQGETADAVRDFLPFFRDHFDVTIRRVPLESAVNITGKAEDGVVNVAAECFEHGLRVCRDNDVKAADFLLLRARVRSARDPDGSQYLLPLEVSAKLRRRLRDLGDRYGVVINSVPSRSVGLGSXXXXXXXXXXXLPQYLCCPRVDTDDDTQDHRKVVQIWGLRNCVIGAFDRVVASLLDHMEYVVKLGPVGADERKRLRFKGKNVNYVVEGGVTEVRISGRPHLAA-GNISTVLQSLPERLPNQVQCVSASYS 615
            ++QRLGRH+AL W+IQR ARS QRQISAFW WRLAPAPATA ILR REWEESIGSG VVAETA RR+DASAEPATARV+E+RQ+L D  T S  D+S  ATATAPQAAVTTLA DLRTQ E AASDEVGQEEGEAPHCGTW VADRVQDLERKEEE VRSQ EDEK R K SS QREGLRTAAQEDAK+ PSGRTPEDAA  G+SG GG                                    GETGFATARG      VP ATRQTEG ET                   VLEGLSASNMTSATG+SELQ PPSAA+SSSHMNDIGDTLP RA  GSHAGIDGDRAGSRPEAI TSE+RLP QGETADAVRDF PFFRDHFDVTIR VPLESAV I+GKAEDGVV+VAAECFEHGLRVCRD++VKAADFLLLRARVRSARDPDGSQYLLPLEVS KLRRRLRDLGD YGVVINSVP+RSVGLGSXXXXXXXXX  LP+YLCCP VDTDD+TQDHRKVVQIWGLR+CV+GAFDRVVASLLD+MEYVVKLG VGADE KRLRFKGKNV Y  EGGVT VRISGRPHL A  N+STVLQSLPERLP++VQCV   Y+
Sbjct:  773 AQQRLGRHYALGWLIQRVARSHQRQISAFWRWRLAPAPATAAILRPREWEESIGSGTVVAETALRRRDASAEPATARVKEERQELLDTGTAS--DTSATATATAPQAAVTTLAADLRTQSETAASDEVGQEEGEAPHCGTWAVADRVQDLERKEEEEVRSQREDEKARGKESSRQREGLRTAAQEDAKQVPSGRTPEDAAGAGSSGAGGG----------------------------------AGETGFATARGXXXXXCVPGATRQTEGGET-------------------VLEGLSASNMTSATGDSELQGPPSAASSSSHMNDIGDTLPGRAENGSHAGIDGDRAGSRPEAIHTSEVRLPCQGETADAVRDFSPFFRDHFDVTIRHVPLESAVYISGKAEDGVVHVAAECFEHGLRVCRDDEVKAADFLLLRARVRSARDPDGSQYLLPLEVSIKLRRRLRDLGDLYGVVINSVPARSVGLGSXXXXXXXXXG-LPEYLCCPGVDTDDNTQDHRKVVQIWGLRDCVVGAFDRVVASLLDNMEYVVKLGSVGADELKRLRFKGKNVKYFTEGGVTGVRISGRPHLFADANVSTVLQSLPERLPDKVQCVDMKYT 1333          
BLAST of mRNA_Ecto-sp13_S_contig10103.136.1 vs. uniprot
Match: D7FSR8_ECTSI (Similar to deubiquitinating enzyme 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR8_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 4.770e-15
Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 0
Query:  204 SGXGGDGLRTPVLREEISDRFSSAPARASSPVCRGHSSPQTGETGFATARGGGGAGYVPDATRQTEGVET 273
            +G G DGLR  VLR+EI+ R SSAPA ASSPVCRGH S QTGETGFA ARGGGG G V  AT QTE  ET
Sbjct:  600 NGGGRDGLRPSVLRDEIAGRLSSAPASASSPVCRGHPSSQTGETGFAAARGGGGDGCVQGATCQTEAGET 669          
BLAST of mRNA_Ecto-sp13_S_contig10103.136.1 vs. uniprot
Match: D7FYB9_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB9_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 1.550e-14
Identity = 48/64 (75.00%), Postives = 50/64 (78.12%), Query Frame = 0
Query:  210 GLRTPVLREEISDRFSSAPARASSPVCRGHSSPQTGETGFATARGGGGAGYVPDATRQTEGVET 273
            GLR  VLR+EI+ R SSAPA ASSPVCRGH SPQTGETGFA ARGGGG G V  AT QTE  ET
Sbjct:   14 GLRPSVLRDEIAGRLSSAPASASSPVCRGHPSPQTGETGFAAARGGGGDGCVQGATCQTEAGET 77          
BLAST of mRNA_Ecto-sp13_S_contig10103.136.1 vs. uniprot
Match: A0A6H5KS24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS24_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.490e-11
Identity = 52/83 (62.65%), Postives = 56/83 (67.47%), Query Frame = 0
Query:   10 ALAWVIQRAARSRQRQISAFWHWRLAPAPATAPILRQREWEESIGSGAVVAETAPRRQDASAEPATARVEEDRQDLPDAATDS 92
            AL  VIQRAARS Q Q               A ILRQRE EESIG GA VAET  RR+DASAEPATARVEE+RQ+LP+ A DS
Sbjct:  678 ALGRVIQRAARSHQPQXXXXXXXXXXXXXXXAAILRQREREESIGRGAAVAETPLRRRDASAEPATARVEEERQELPNTAADS 760          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10103.136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JR78_9PHAE1.590e-31082.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTQ8_ECTSI6.630e-27776.18Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FSR8_ECTSI4.770e-1571.43Similar to deubiquitinating enzyme 3 n=1 Tax=Ectoc... [more]
D7FYB9_ECTSI1.550e-1475.00USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KS24_9PHAE2.490e-1162.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 147..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10103contigEcto-sp13_S_contig10103:443..5576 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10103.136.1mRNA_Ecto-sp13_S_contig10103.136.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10103 443..5576 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10103.136.1 ID=prot_Ecto-sp13_S_contig10103.136.1|Name=mRNA_Ecto-sp13_S_contig10103.136.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=615bp
SRQRLGRHFALAWVIQRAARSRQRQISAFWHWRLAPAPATAPILRQREWE
ESIGSGAVVAETAPRRQDASAEPATARVEEDRQDLPDAATDSEVDSSTIA
TATAPQAAVTTLAEDLRTQPEPAASDEVGQEEGEAPHCGTWTVADRVQDL
ERKEEEVRSQSEDEKVRRKASSGQREGLRTAAQEDAKKAPSGRTPEDAAA
GGTSGGGGDGLRTPVLREEISDRFSSAPARASSPVCRGHSSPQTGETGFA
TARGGGGAGYVPDATRQTEGVETPMTSSSAPPMSDVRGLSPQVLEGLSAS
NMTSATGESELQEPPSAAASSSHMNDIGDTLPERAGTGSHAGIDGDRAGS
RPEAIRTSEIRLPYQGETADAVRDFLPFFRDHFDVTIRRVPLESAVNITG
KAEDGVVNVAAECFEHGLRVCRDNDVKAADFLLLRARVRSARDPDGSQYL
LPLEVSAKLRRRLRDLGDRYGVVINSVPSRSVGLGSGGGGSGGGGGGLPQ
YLCCPRVDTDDDTQDHRKVVQIWGLRNCVIGAFDRVVASLLDHMEYVVKL
GPVGADERKRLRFKGKNVNYVVEGGVTEVRISGRPHLAAGNISTVLQSLP
ERLPNQVQCVSASYS
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