prot_Ecto-sp13_S_contig10096.125.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10096.125.1
Unique Nameprot_Ecto-sp13_S_contig10096.125.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length289
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10096.125.1 vs. uniprot
Match: D8LJD7_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD7_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 5.230e-104
Identity = 189/209 (90.43%), Postives = 198/209 (94.74%), Query Frame = 0 
Query:    5 QTLRECSIPPDSQLVLIDTESTVETENKRTSGVEDNGKSTAVAAQESAAAKQMATLVDLMRQQMQWNMRSESGRREQDLGSAEALETRMRGMEASLPRRLEEFMEESVGDLKASVRKALDGMEELHAKRSNAGAIQDDEDETRRKEQQEKLRLVSLTADMERVSKENSALLQELAKLKASQAATSSNIPSTVQTPAAMVVVKEEWSRPE 213
            QTLRECSIPP+SQLVLIDTESTVE ENKRT+G EDNGK+ AVAAQESAAAKQMATLVDLMRQQM+WNMRSESGRRE+DLGSAEALETRMRG+EASLPRRLEEFMEESVGDLKASVR+ALDGMEELHAKRSNAGAIQDDEDETRRKEQQEKLRL SL+ADMERVSKENSALLQELAKLKA QAA S    STVQTPAA+VVVKEE SRPE
Sbjct:  220 QTLRECSIPPESQLVLIDTESTVEAENKRTAGEEDNGKAAAVAAQESAAAKQMATLVDLMRQQMEWNMRSESGRREKDLGSAEALETRMRGIEASLPRRLEEFMEESVGDLKASVRQALDGMEELHAKRSNAGAIQDDEDETRRKEQQEKLRLASLSADMERVSKENSALLQELAKLKAPQAAASPTSASTVQTPAAVVVVKEESSRPE 428
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BLAST of mRNA_Ecto-sp13_S_contig10096.125.1 vs. uniprot
Match: A0A6H5LKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKS3_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 1.310e-58
Identity = 110/122 (90.16%), Postives = 114/122 (93.44%), Query Frame = 0 
Query:  164 MERVSKENSALLQELAKLKASQAATSSNIPSTVQTPAAMVVVKEEWSRPEESKDVSEDPVAPPPNPSRNTSIWELTFPAKGSRQAVVVQVSRKSTCETVCESVAEKLDVADARIVLRDKSTG 285
            MERVSKENSALLQELAKLKASQAA SS IPST+QTPAA+VVVKEE SRPE SK VSEDPVAPPPN SRNTSIWELTFP KGSRQAVVVQVSRKSTCET+CES+AEKLDVADARIVLRD STG
Sbjct:    1 MERVSKENSALLQELAKLKASQAAASSTIPSTIQTPAAVVVVKEESSRPEVSKAVSEDPVAPPPNSSRNTSIWELTFPVKGSRQAVVVQVSRKSTCETLCESIAEKLDVADARIVLRDNSTG 122
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10096.125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJD7_ECTSI5.230e-10490.43C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5LKS3_9PHAE1.310e-5890.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10096contigEcto-sp13_S_contig10096:2002..6011 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10096.125.1mRNA_Ecto-sp13_S_contig10096.125.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10096 2002..6011 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10096.125.1 ID=prot_Ecto-sp13_S_contig10096.125.1|Name=mRNA_Ecto-sp13_S_contig10096.125.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bp
LRDDQTLRECSIPPDSQLVLIDTESTVETENKRTSGVEDNGKSTAVAAQE
SAAAKQMATLVDLMRQQMQWNMRSESGRREQDLGSAEALETRMRGMEASL
PRRLEEFMEESVGDLKASVRKALDGMEELHAKRSNAGAIQDDEDETRRKE
QQEKLRLVSLTADMERVSKENSALLQELAKLKASQAATSSNIPSTVQTPA
AMVVVKEEWSRPEESKDVSEDPVAPPPNPSRNTSIWELTFPAKGSRQAVV
VQVSRKSTCETVCESVAEKLDVADARIVLRDKSTGKTP*
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