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Homology
BLAST of mRNA_Ecto-sp13_S_contig10096.125.1 vs. uniprot
Match: D8LJD7_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD7_ECTSI) HSP 1 Score: 327 bits (838), Expect = 5.230e-104 Identity = 189/209 (90.43%), Postives = 198/209 (94.74%), Query Frame = 1 Query: 13 QTLRECSIPPDSQLVLIDTESTVETENKRTSGVEDNGKSTAVAAQESAAAKQMATLVDLMRQQMQWNMRSESGRREQDLGSAEALETRMRGMEASLPRRLEEFMEESVGDLKASVRKALDGMEELHAKRSNAGAIQDDEDETRRKEQQEKLRLVSLTADMERVSKENSALLQELAKLKASQAATSSNIPSTVQTPAAMVVVKEEWSRPE 639
QTLRECSIPP+SQLVLIDTESTVE ENKRT+G EDNGK+ AVAAQESAAAKQMATLVDLMRQQM+WNMRSESGRRE+DLGSAEALETRMRG+EASLPRRLEEFMEESVGDLKASVR+ALDGMEELHAKRSNAGAIQDDEDETRRKEQQEKLRL SL+ADMERVSKENSALLQELAKLKA QAA S STVQTPAA+VVVKEE SRPE
Sbjct: 220 QTLRECSIPPESQLVLIDTESTVEAENKRTAGEEDNGKAAAVAAQESAAAKQMATLVDLMRQQMEWNMRSESGRREKDLGSAEALETRMRGIEASLPRRLEEFMEESVGDLKASVRQALDGMEELHAKRSNAGAIQDDEDETRRKEQQEKLRLASLSADMERVSKENSALLQELAKLKAPQAAASPTSASTVQTPAAVVVVKEESSRPE 428
BLAST of mRNA_Ecto-sp13_S_contig10096.125.1 vs. uniprot
Match: A0A6H5LKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKS3_9PHAE) HSP 1 Score: 203 bits (516), Expect = 1.310e-58 Identity = 110/122 (90.16%), Postives = 114/122 (93.44%), Query Frame = 1 Query: 490 MERVSKENSALLQELAKLKASQAATSSNIPSTVQTPAAMVVVKEEWSRPEESKDVSEDPVAPPPNPSRNTSIWELTFPAKGSRQAVVVQVSRKSTCETVCESVAEKLDVADARIVLRDKSTG 855
MERVSKENSALLQELAKLKASQAA SS IPST+QTPAA+VVVKEE SRPE SK VSEDPVAPPPN SRNTSIWELTFP KGSRQAVVVQVSRKSTCET+CES+AEKLDVADARIVLRD STG
Sbjct: 1 MERVSKENSALLQELAKLKASQAAASSTIPSTIQTPAAVVVVKEESSRPEVSKAVSEDPVAPPPNSSRNTSIWELTFPVKGSRQAVVVQVSRKSTCETLCESIAEKLDVADARIVLRDNSTG 122
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10096.125.1 vs. uniprot
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
| Match Name | E-value | Identity | Description | |
|---|
| D8LJD7_ECTSI | 5.230e-104 | 90.43 | C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... | [more] |
| A0A6H5LKS3_9PHAE | 1.310e-58 | 90.16 | Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 0 |
| Seed ortholog score | 336.7 |
| Seed ortholog evalue | 1.1e-89 |
| Seed eggNOG ortholog | 2880.D8LJD7 |
| Preferred name | DZIP1 |
| Model size | 867 |
| KEGG ko | ko:K16470 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000226,GO:0000902,GO:0000904,GO:0001568,GO:0001578,GO:0001944,GO:0001947,GO:0002009,GO:0003006,GO:0003007,GO:0003143,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006355,GO:0006357,GO:0006606,GO:0006607,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006935,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007276,GO:0007281,GO:0007368,GO:0007389,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007507,GO:0008104,GO:0008150,GO:0008589,GO:0009605,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009987,GO:0010468,GO:0010556,GO:0010638,GO:0010646,GO:0015031,GO:0015630,GO:0015833,GO:0016043,GO:0017038,GO:0019219,GO:0019222,GO:0019953,GO:0021536,GO:0021983,GO:0021984,GO:0022008,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030510,GO:0030900,GO:0031175,GO:0031290,GO:0031323,GO:0031326,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034451,GO:0034504,GO:0034613,GO:0035050,GO:0035082,GO:0035239,GO:0035270,GO:0035295,GO:0036064,GO:0040011,GO:0042221,GO:0042330,GO:0042886,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043393,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045184,GO:0045185,GO:0045724,GO:0045995,GO:0046907,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048562,GO:0048568,GO:0048583,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048729,GO:0048731,GO:0048732,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051098,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051179,GO:0051220,GO:0051234,GO:0051235,GO:0051239,GO:0051252,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0060255,GO:0060271,GO:0060322,GO:0060429,GO:0060491,GO:0060562,GO:0061371,GO:0061512,GO:0061564,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0072358,GO:0072359,GO:0072594,GO:0080090,GO:0090092,GO:0090287,GO:0097485,GO:0097539,GO:0097730,GO:0120025,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:1902017,GO:1902115,GO:1902117,GO:1903506,GO:1905330,GO:2000026,GO:2000027,GO:2000112,GO:2000223,GO:2000826,GO:2001141 |
| Exons | 7 |
| EggNOG free text desc. | Zinc finger protein |
| EggNOG OGs | 28IYV@1,2QRAI@2759 |
| Cds size | 867 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03036 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462507.232857-CDS-Ecto-sp13_S_contig10096:2001..2154 | 1681462507.232857-CDS-Ecto-sp13_S_contig10096:2001..2154 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10096 2002..2154 - |
| 1681462507.2440963-CDS-Ecto-sp13_S_contig10096:2660..2735 | 1681462507.2440963-CDS-Ecto-sp13_S_contig10096:2660..2735 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10096 2661..2735 - |
| 1681462507.2684703-CDS-Ecto-sp13_S_contig10096:3375..3558 | 1681462507.2684703-CDS-Ecto-sp13_S_contig10096:3375..3558 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10096 3376..3558 - |
| 1681462507.2788532-CDS-Ecto-sp13_S_contig10096:4057..4150 | 1681462507.2788532-CDS-Ecto-sp13_S_contig10096:4057..4150 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10096 4058..4150 - |
| 1681462507.2894518-CDS-Ecto-sp13_S_contig10096:4545..4617 | 1681462507.2894518-CDS-Ecto-sp13_S_contig10096:4545..4617 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10096 4546..4617 - |
| 1681462507.2991972-CDS-Ecto-sp13_S_contig10096:5206..5425 | 1681462507.2991972-CDS-Ecto-sp13_S_contig10096:5206..5425 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10096 5207..5425 - |
| 1681462507.3079998-CDS-Ecto-sp13_S_contig10096:5939..6011 | 1681462507.3079998-CDS-Ecto-sp13_S_contig10096:5939..6011 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10096 5940..6011 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10096.125.1 >prot_Ecto-sp13_S_contig10096.125.1 ID=prot_Ecto-sp13_S_contig10096.125.1|Name=mRNA_Ecto-sp13_S_contig10096.125.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bp
LRDDQTLRECSIPPDSQLVLIDTESTVETENKRTSGVEDNGKSTAVAAQE
SAAAKQMATLVDLMRQQMQWNMRSESGRREQDLGSAEALETRMRGMEASL
PRRLEEFMEESVGDLKASVRKALDGMEELHAKRSNAGAIQDDEDETRRKE
QQEKLRLVSLTADMERVSKENSALLQELAKLKASQAATSSNIPSTVQTPA
AMVVVKEEWSRPEESKDVSEDPVAPPPNPSRNTSIWELTFPAKGSRQAVV
VQVSRKSTCETVCESVAEKLDVADARIVLRDKSTGKTP* back to topmRNA from alignment at Ecto-sp13_S_contig10096:2002..6011- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10096.125.1 ID=mRNA_Ecto-sp13_S_contig10096.125.1|Name=mRNA_Ecto-sp13_S_contig10096.125.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4010bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10096:2002..6011- (Ectocarpus species13 EcNAP12_S_4_19m)
CTTCGTGACGACCAGACTCTGAGAGAGTGCAGCATTCCGCCAGACAGCCA
GCTGGTACTTATTGACACGGAGGTAAGAGAGAACGCCCTGTCCGACCTAC
GTCAAAAAATAGAAACACATTGGGTGACAAGGCCGCAGGGAGACTAAATA
GGCTTGATTCCAACGCCACTAAAATACGAGAGGATTCAATGTAGAAGGTG
CAGCCGGAAAACCGAGCATCGTGATTGCTGCTTTTCATCGAAGGCGGCCT
GGTCTCGCCTACTATCAGTATCAAACGATATCCAAGAGGAAAAGACGCCA
ATGTCAGGAAAAAACGTCAATGTCGCCATGTCGCCACACTTCCTGTGTGT
CGCAGCACAACTCCACCATAAATCATGCTAACCCATCACGACACCCTAAC
AACCGAGAGATGCTTTTATCTCCACCACACAGGGTTCCACCAAATATGTC
GGCATTCGGAAGCGTCGTCACATTCCTTCGTTGCCATTATGGTAACATAC
ACAGCGCTGTTAGTGCCATTTTTTCTTTGGCATTCGTAAACTGAGGACTG
CATCACCCTTTGTTTCCTTTGCTGTGTTTCATGAAGTCCACCGTAGAGAC
AGAGAACAAAAGAACGTCAGGAGTAGAGGACAACGGCAAATCTACCGCCG
TTGCTGCTCAAGAATCAGCCGCAGCGAAACAAATGGCGACCCTCGTGGAC
CTCATGCGACAGCAAATGCAGTGGAACATGAGGAGTGAGAGCGGCAGGCG
GGAGCAGGACCTAGGGTCGGCCGAAGCCCTAGAGACGAGAATGCGAGGGA
TGGAGGTATTGTAACGTTCTCCCGTGCTAGCATGCTGTCCCGCTACCATC
CTGCTTTGATTTCTGCATCCAACGTGGCTGGGATGACCCCTCCGCGCTGT
TTCTTTGACGTTCTAGAATGACAACAAGCCTATCGTTGCCCCGGTCAGTT
GTCAGGCTCAACCTTTGGTGGGGGTGAGGTTAGAGGAGAAGATCGCCCGT
CCTTCCGAGTTAGGAGGAGCTTGGTCAGAGAGGATACTCCCTTGGTCGTT
CAGAAGCAAGTGCGTAGCTGAAGTTAAGCCCGCGCTACAGACCACGTGCC
ACTAGAGACTACCTCGAAGCGCTGAGAAGGGTGTCCTGTACTTTTCGCTC
TTACCGTCCTCTTCATTCCGTTGTTGCTGACTTTCTGGGCGATGCTTTTT
TTGAACCGTTCCCCCGACTTTTTTTTCTCATTCCGCCGGGTGTCCTTCCT
CTACTTGCAGTGTTGTAAGGCGTACAAGCATTCCGCCTGTCCCTCCGTAT
TCACCCTTTTTCTTCGTGACTGGGGATGTCCTACTCAGTCCTTCTGGCAT
GCGTCAACTCTCTGTGTTCACTTTGTGCGTTCGTTTCGTTTTAGGCGTCG
TTACCTCGGCGGCTGGAGGAGTTCATGGAAGAGAGCGTCGGCGACCTCAA
GGCCTCAGTACGCAAGGTGCCGTTAACCCACAGCAAACACAGTGGTGACC
TTTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTTACCGCGTTTCAGTTACGCCACGACGAA
AGCACTCACGCTCGTTGCTCGCTCGGTCGTTCCATCCGACAACGCGGCAC
TCTTCCCGAAGGCCCTAGACGGGATGGAGGAACTGCATGCGAAACGGTCG
AATGCTGGGGCGATTCAAGACGATGAGGACGAGACTAGAAGAAAGGAGCA
ACAGGTGAGGTGGGGCCACGCACACTTTTCAATGGTTGCGCTGGAATGAC
GCGCGCCCTTAAAAGTGTTTACGTATGACGTGTGGCGGTGGATCGTACCC
GATAGTAGTGACGAATCAAAAAAGGGAACACCACATACATGATGTTGCAT
ACCTATTCTACCGCGGCGTTTGAAATCAGTCATGGCTTCGGCAGAGCAAA
GGGGGAGCCCATGCCGAAGAAGATTCAGTGTCGGCTATCCATACAACCTC
ACCACCCTGTTATGCCCAATCGATACGAAAAACAACCCTCCGCATGGTTG
ATCCCCATTCAGACCTGGCCTGAAACAAACGATCACTTCGTTATGGAACA
GAGACTCCATTGGTTCCGAAAAAACGAAAGGCGGGTTTAGAAACGCAGAT
CAGCGGAGGATCGTGTGCTTCATTCTAAATGGTGATGAAATATGACACTG
AGCGTCGACCCGAACTTGATTGACGTTTCTTAATTGCGGATCCGTTTCCA
TAGGAGAAGTTGCGTCTGGTCTCGCTGACGGCGGACATGGAACGCGTTTC
CAAAGAGAATTCAGCCTTGCTGCAGGAGTTGGCCAAGCTCAAGGCCTCAC
AAGCAGCAACAAGCTCAAACATCCCCAGCACTGTCCAAACCCCAGCGGCT
ATGGTCGTGGTGAAAGAGGAATGGTCTCGACCTGAGGTGGGGGGGAAGCG
GGTTGTAAACGGGTAGTGGCTTGCATGGACGGCATGAAGAAGGCATGTCC
CATTGAATTCCGGCTTGCGCAATCATTTTGGCACCTGGCGCACGATTTGT
AGCCTTAGATGTGACAGACCGAGGCTGGAAGCTCTTGTGCTCTTCGACAG
TTGTGGGCAGAGGGCGATGACGGTCGGTGCGTTGCCGCCATGGGATATAA
CGACAGCGTACAGCGTGGGGAGTTCAAACCCTCACGGGGTAGTACGCCAA
TCACGCCTCTTCATGGGAAAGGTTTCTCGGAAGCGCTTCTCGTTCCGCCT
GAGTTTTCGTTGAAAAGCACGGAATCTTCGGAAGTGAAATTGAATGTCAC
CTGTCTACAGTAGCTACCACTGAAACCTCGTGCGAGCACGTAATCATGCA
CCAAGCAAGCTTTGCGTGAGAAACCCTCCGGCGTTTGCCCGCCATACGGT
TGCCATCCAAGAGAAGACCCTACAGACTACGTGCGCACATGTAGTTGGTA
CGCGAGGAAACTGTTGGAGGCGACCCACTTTTCTGCCATGTTAGAAAACG
AGTGCCAGCCATACGCATGAATACACTGCGCACTCCTTCCTTGTCCAACA
AAATGCCGCTCCACGGTTCTTCACAGGAATCGAAAGATGTCTCTGAGGAC
CCTGTGGCACCCCCTCCCAACCCATCGCGCAACACGTCAATTTGGGAGTT
GGTGAGTTCTTGCGTGACTATTCGAAGTGACCCGTGCTCACTGCGACGCA
TCGTTGCAAGGTCTCATTTACGTGGGGTGCCAGTGCCACGAGAAAGCATA
TTTGCCGTGTGAGTATCAAAACATGATACATTGGCGCACGTGGAATGACC
TAGACATACAGATCACTTGGGTCGGTCTTTCGCCCAGGACTTAAGTACTG
GCAGGTGCCCGTTGTCTGCTTCAGTTTGTCAGGCACGTTTGTAGGTAAAA
CGACCCGGATAACCAATCTCGAGGAAAGGATGACAAAAGCCGGGCGCTTT
GTCCTATGTACGACCGCTGCCAACCATTTACACAACATGGGGCTGTTCCG
GGTTCAAGCCACCAATGCTCGATTTTTCCTGAAGGGGATGGTCATGATCG
CGTTGTTGGTGGTGTAAGTGTATGATGCCTGCTGGATCTTCTCTCATCGT
GGGTTCACTCTGTTGGTTCCTCGTGTGCCGTCCTTCTTGCGTCGGTTCTC
ACCTCAGACTTTCCCCGCGAAAGGCTCGAGACAAGCCGTCGTCGTCCAAG
TGTCGCGGAAATCCACGTGCGAGACTGTGTGCGAGTCTGTCGCCGAGAAG
TTGGACGTCGCCGACGCAAGGATCGTCTTGCGTGACAAAAGCACAGGCAA
GACTCCGTAA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10096:2002..6011- >mRNA_Ecto-sp13_S_contig10096.125.1 ID=mRNA_Ecto-sp13_S_contig10096.125.1|Name=mRNA_Ecto-sp13_S_contig10096.125.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=867bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10096:2002..6011- (Ectocarpus species13 EcNAP12_S_4_19m)
CTTCGTGACGACCAGACTCTGAGAGAGTGCAGCATTCCGCCAGACAGCCA
GCTGGTACTTATTGACACGGAGTCCACCGTAGAGACAGAGAACAAAAGAA
CGTCAGGAGTAGAGGACAACGGCAAATCTACCGCCGTTGCTGCTCAAGAA
TCAGCCGCAGCGAAACAAATGGCGACCCTCGTGGACCTCATGCGACAGCA
AATGCAGTGGAACATGAGGAGTGAGAGCGGCAGGCGGGAGCAGGACCTAG
GGTCGGCCGAAGCCCTAGAGACGAGAATGCGAGGGATGGAGGCGTCGTTA
CCTCGGCGGCTGGAGGAGTTCATGGAAGAGAGCGTCGGCGACCTCAAGGC
CTCAGTACGCAAGGCCCTAGACGGGATGGAGGAACTGCATGCGAAACGGT
CGAATGCTGGGGCGATTCAAGACGATGAGGACGAGACTAGAAGAAAGGAG
CAACAGGAGAAGTTGCGTCTGGTCTCGCTGACGGCGGACATGGAACGCGT
TTCCAAAGAGAATTCAGCCTTGCTGCAGGAGTTGGCCAAGCTCAAGGCCT
CACAAGCAGCAACAAGCTCAAACATCCCCAGCACTGTCCAAACCCCAGCG
GCTATGGTCGTGGTGAAAGAGGAATGGTCTCGACCTGAGGAATCGAAAGA
TGTCTCTGAGGACCCTGTGGCACCCCCTCCCAACCCATCGCGCAACACGT
CAATTTGGGAGTTGACTTTCCCCGCGAAAGGCTCGAGACAAGCCGTCGTC
GTCCAAGTGTCGCGGAAATCCACGTGCGAGACTGTGTGCGAGTCTGTCGC
CGAGAAGTTGGACGTCGCCGACGCAAGGATCGTCTTGCGTGACAAAAGCA
CAGGCAAGACTCCGTAA back to top
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