prot_Ecto-sp13_S_contig10096.124.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10096.124.1
Unique Nameprot_Ecto-sp13_S_contig10096.124.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10096.124.1 vs. uniprot
Match: A0A6H5LKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKS3_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 9.810e-54
Identity = 94/103 (91.26%), Postives = 97/103 (94.17%), Query Frame = 0 
Query:    1 MVPLEALSNELQDLYGRGSLELEVLQGHVLSDNAVDGLVEFYEQNVPIQAKESSVVGQSMAEIDLAAKRHAKVGQKGKGGDGALLGQWGDHAEDGSDHAEKQV 103
            MVPLEALSNELQDLYGRG+LELEVLQGHVLSDNAVDGLVEFYE+NVPIQAKESSVVGQSMAEIDLAAKRH  VGQKG  GD ALLGQWGDHAE G+DHAEKQV
Sbjct:  124 MVPLEALSNELQDLYGRGALELEVLQGHVLSDNAVDGLVEFYEKNVPIQAKESSVVGQSMAEIDLAAKRHVNVGQKGNRGDEALLGQWGDHAEVGTDHAEKQV 226
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BLAST of mRNA_Ecto-sp13_S_contig10096.124.1 vs. uniprot
Match: D8LJD7_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD7_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 6.250e-34
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0 
Query:   35 VDGLVEFYEQNVPIQAKESSVVGQSMAEIDLAAKRHAKVGQKGKGGDGALLGQWGDHAEDGSDHAEKQV 103
            VDGLVEFYEQNVPIQAKESSVVGQSMAEIDLAAKRH KVGQKGKGGDGALLGQWGDH EDG+DHAEKQV
Sbjct:  429 VDGLVEFYEQNVPIQAKESSVVGQSMAEIDLAAKRHVKVGQKGKGGDGALLGQWGDHGEDGNDHAEKQV 497
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10096.124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LKS3_9PHAE9.810e-5491.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJD7_ECTSI6.250e-3495.65C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10096contigEcto-sp13_S_contig10096:434..1706 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10096.124.1mRNA_Ecto-sp13_S_contig10096.124.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10096 434..1711 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10096.124.1 ID=prot_Ecto-sp13_S_contig10096.124.1|Name=mRNA_Ecto-sp13_S_contig10096.124.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
MVPLEALSNELQDLYGRGSLELEVLQGHVLSDNAVDGLVEFYEQNVPIQA
KESSVVGQSMAEIDLAAKRHAKVGQKGKGGDGALLGQWGDHAEDGSDHAE
KQV
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