prot_Ecto-sp13_S_contig11411.1243.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11411.1243.1
Unique Nameprot_Ecto-sp13_S_contig11411.1243.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length90
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11411.1243.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 8.270e-46
Identity = 84/90 (93.33%), Postives = 85/90 (94.44%), Query Frame = 0 
Query:    1 WTGATGEERAEYAATAEDVLGPFVDASGKGGDLPYARREIAEAHMAVSVADWAEGNPNSAKREAELALRVLLEGKLGYVDKDEALRRKGR 90
            WTGATGEERAEYAATAE VL PFVDASGKGGDL YARREIAEAHMAVSVADWAEGNP SAKREAELALR LLEGKLGYVDKDEALRR+GR
Sbjct: 1181 WTGATGEERAEYAATAEYVLAPFVDASGKGGDLSYARREIAEAHMAVSVADWAEGNPISAKREAELALRALLEGKLGYVDKDEALRREGR 1270
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11411.1243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LS90_ECTSI8.270e-4693.33eIF3_p135 domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11411contigEcto-sp13_S_contig11411:2507..3230 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11411.1243.1mRNA_Ecto-sp13_S_contig11411.1243.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11411 2506..3230 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11411.1243.1 ID=prot_Ecto-sp13_S_contig11411.1243.1|Name=mRNA_Ecto-sp13_S_contig11411.1243.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
WTGATGEERAEYAATAEDVLGPFVDASGKGGDLPYARREIAEAHMAVSVA
DWAEGNPNSAKREAELALRVLLEGKLGYVDKDEALRRKGR
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