prot_Ecto-sp13_S_contig10093.122.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10093.122.1
Unique Nameprot_Ecto-sp13_S_contig10093.122.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length60
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10093.122.1 vs. uniprot
Match: D7FR40_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR40_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 3.140e-32
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 
Query:    1 KTDRESVLRGEDYWIDYREVDRKKAIREAKAKAPAPDQFAQSKMKAEIVNPYKQNWILAI 60
            KTDRESVLRGEDYWIDYREVDRKKAIREAKAKAPAPDQFAQSKMKAEIVNPYKQNWILAI
Sbjct:  195 KTDRESVLRGEDYWIDYREVDRKKAIREAKAKAPAPDQFAQSKMKAEIVNPYKQNWILAI 254
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BLAST of mRNA_Ecto-sp13_S_contig10093.122.1 vs. uniprot
Match: K0S2D5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S2D5_THAOC)

HSP 1 Score: 56.2 bits (134), Expect = 1.570e-8
Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 0 
Query:    4 RESVLRGEDYWIDYREVDRKKAIREAKAKAPAPDQFAQSKMKAEIVNPYKQNWI 57
            R++V +G DYWID  E+++ KA     AK     + +Q K+KAEIV PYKQNWI
Sbjct:   45 RDAVEQGLDYWIDEEEINKSKARESRPAKTSKRSRMSQDKLKAEIVAPYKQNWI 98
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10093.122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR40_ECTSI3.140e-32100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K0S2D5_THAOC1.570e-850.00Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10093contigEcto-sp13_S_contig10093:2320..3063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10093.122.1mRNA_Ecto-sp13_S_contig10093.122.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10093 2320..3065 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10093.122.1 ID=prot_Ecto-sp13_S_contig10093.122.1|Name=mRNA_Ecto-sp13_S_contig10093.122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp
KTDRESVLRGEDYWIDYREVDRKKAIREAKAKAPAPDQFAQSKMKAEIVN
PYKQNWILAI
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