prot_Ecto-sp13_S_contig100895.120.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig100895.120.1
Unique Nameprot_Ecto-sp13_S_contig100895.120.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length74
Homology
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BLAST of mRNA_Ecto-sp13_S_contig100895.120.1 vs. uniprot
Match: A0A6H5L4Q1_9PHAE (Cysteine-rich DPF motif domain-containing protein 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q1_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 2.800e-41
Identity = 66/73 (90.41%), Postives = 68/73 (93.15%), Query Frame = 0 
Query:    1 RKCLPTVVGGTCAVCSKDVCAQCSLFYAVRLCGHCARARRASLPSELHRIVDATGGAPEKDPVETGGEAAPCL 73
            RKCLPTVVGGTCAVCSKDVCAQCSLFYAVRLCGHCARA +ASLPSELHRIVDATGGAPEK P ETGG+A  CL
Sbjct:   25 RKCLPTVVGGTCAVCSKDVCAQCSLFYAVRLCGHCARAHKASLPSELHRIVDATGGAPEKYPAETGGKAVSCL 97
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig100895.120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4Q1_9PHAE2.800e-4190.41Cysteine-rich DPF motif domain-containing protein ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018785Cysteine-rich domain, DPF-motifPFAMPF10170C6_DPFcoord: 7..49
e-value: 3.6E-10
score: 40.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig100895contigEcto-sp13_S_contig100895:278..499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig100895.120.1mRNA_Ecto-sp13_S_contig100895.120.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig100895 206..499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig100895.120.1 ID=prot_Ecto-sp13_S_contig100895.120.1|Name=mRNA_Ecto-sp13_S_contig100895.120.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=74bp
RKCLPTVVGGTCAVCSKDVCAQCSLFYAVRLCGHCARARRASLPSELHRI
VDATGGAPEKDPVETGGEAAPCL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018785Cys-rich_DPF