prot_Ecto-sp13_S_contig10080.111.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10080.111.1
Unique Nameprot_Ecto-sp13_S_contig10080.111.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length233
Homology
BLAST of mRNA_Ecto-sp13_S_contig10080.111.1 vs. uniprot
Match: A0A6H5KBR7_9PHAE (GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR7_9PHAE)

HSP 1 Score: 416 bits (1070), Expect = 5.240e-143
Identity = 216/234 (92.31%), Postives = 220/234 (94.02%), Query Frame = 0
Query:    1 MFCSQRFVVVVGLLAALLVFAGVTLQGTWNVERSLSFTSV----ASHPTASGSSAFGDGKEEIGEINSSSQHRGLFDRGARDGGGERRARLAFLIMSSGDDIAKLSVLLPEIYHPNNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADTGVSFMDGELMTGFEKRWQ 230
            MFCSQR VVVVGLLAALLVFA V LQG+WNVER+LS TSV    ASH TASGSSAFGDGK+EI E NSSSQHRGLFDRGARDG GERRARLAFLIMSSGDDIAKLSVLLPEIYHP+NIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHAD GVSFMDGE MTGFEKRWQ
Sbjct:    1 MFCSQRLVVVVGLLAALLVFAEVALQGSWNVERNLSVTSVDRSIASHTTASGSSAFGDGKKEIAEFNSSSQHRGLFDRGARDGRGERRARLAFLIMSSGDDIAKLSVLLPEIYHPDNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGEPMTGFEKRWQ 234          
BLAST of mRNA_Ecto-sp13_S_contig10080.111.1 vs. uniprot
Match: D8LDZ1_ECTSI (Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ1_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 3.680e-116
Identity = 172/180 (95.56%), Postives = 177/180 (98.33%), Query Frame = 0
Query:   51 AFGDGKEEIGEINSSSQHRGLFDRGARDGGGERRARLAFLIMSSGDDIAKLSVLLPEIYHPNNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADTGVSFMDGELMTGFEKRWQ 230
            AFGDGK+EIGE+NSSSQHRGLFD+GARDG GERRARLAFLIMSSGDDIAKLSVLLPEIYHP+NIYLVHVDAKAPREQTEKIREVVRANFPAADGRP NG+LLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHAD GVSFMDGELMTGFEKRWQ
Sbjct:  115 AFGDGKKEIGEVNSSSQHRGLFDQGARDGRGERRARLAFLIMSSGDDIAKLSVLLPEIYHPDNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPPNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGELMTGFEKRWQ 294          
BLAST of mRNA_Ecto-sp13_S_contig10080.111.1 vs. uniprot
Match: A0A6H5L6Q9_9PHAE (Protein xylosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6Q9_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 6.000e-30
Identity = 64/140 (45.71%), Postives = 92/140 (65.71%), Query Frame = 0
Query:   82 ERRARLAFLIMSSG-DDIAKLSVLLPEIYHPNNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADTGVSFMDGE 220
            E+RAR+ +LIMSSG +++ K   LL  IY PNN YLVH+D         K +  +R +F        N ++LEPA  VSWGG++ITL  ++GI   + W++ WD+FINLS SDFP++ Q E+T  LG++AD G++F+ GE
Sbjct:  171 EKRARIGYLIMSSGTEELHKTKRLLKAIYDPNNFYLVHLD--------RKDKHSIRRDFENFIEEWDNVRMLEPALDVSWGGYTITLTAIFGICTMVQWNDEWDFFINLSASDFPLLPQSELTTVLGKYADVGMNFVSGE 302          
BLAST of mRNA_Ecto-sp13_S_contig10080.111.1 vs. uniprot
Match: A0A6H5L1U8_9PHAE (GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1U8_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 5.640e-25
Identity = 56/143 (39.16%), Postives = 87/143 (60.84%), Query Frame = 0
Query:   81 GERRARLAFLIMSSGD-DIAKLSVLLPEIYHPNNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADTGVSFMDGELM 222
            G R AR AFLIM+ G  D+  L   +P +Y P N +L+H+D K+  +    +RE++            N ++LEPA  VSWGG+SITL  L+G++  + W   WDYFINLS +DFP+++  EM++ +G   ++ ++F+ G  M
Sbjct:  124 GTRPARFAFLIMAHGPADVELLRRNVPWLYSPLNFFLIHMDRKSSDKDRADVRELLHGL--------DNARILEPAQSVSWGGYSITLTALFGLSTLVEWSRDWDYFINLSATDFPLLSSAEMSVAMGSFVESRMNFVTGSAM 258          
BLAST of mRNA_Ecto-sp13_S_contig10080.111.1 vs. uniprot
Match: A0A835YZY2_9STRA (Core-2/I-branching enzyme-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY2_9STRA)

HSP 1 Score: 102 bits (253), Expect = 8.260e-22
Identity = 59/135 (43.70%), Postives = 82/135 (60.74%), Query Frame = 0
Query:   85 ARLAFLIMSSGD-DIAKLSVLLPEIYHPNNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHA-DTGVSFM 217
            A++ F I  SG  D   LS LL  ++H +N+YL+HVDAKA       IR V++     A   P N KL++    VSWG FS+ L  L+G+++A+ W   WD++INLS +D P++T DEM L LG  + D  VSFM
Sbjct:   42 AKILFSITISGSRDALALSTLLRALWHQDNLYLLHVDAKALASDMAAIRNVIKQ---VAGADPKNIKLVDNPVQVSWGRFSMLLTALHGLSSAIGWSSQWDFWINLSPADMPLLTADEMRLVLGALSRDRPVSFM 173          
BLAST of mRNA_Ecto-sp13_S_contig10080.111.1 vs. uniprot
Match: A0A6H5KJT8_9PHAE (Protein xylosyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT8_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 2.600e-21
Identity = 53/149 (35.57%), Postives = 82/149 (55.03%), Query Frame = 0
Query:   83 RRARLAFLIMSSG-DDIAKLSVLLPEIYHPNNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADTGVSFMDGELMTGFEKRWQ 230
            ++AR+ F IM +   ++  L  LL  +YH ++ +LVH+D KA     + +   +            N + ++PA  V+WGGF++TL  +YG+  AL W+  WDYFINLS SD P++  DE+   LGEH     SF+ G     +E  W+
Sbjct:   85 QKARVVFYIMVANLQELPGLDALLRTLYHVDHFFLVHLDVKASALARQGVESGIERMLDERGNGERNVRFVDPAMPVTWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITG---FKYEPSWE 230          
BLAST of mRNA_Ecto-sp13_S_contig10080.111.1 vs. uniprot
Match: D8LCA7_ECTSI (Protein xylosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA7_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 6.990e-19
Identity = 47/134 (35.07%), Postives = 74/134 (55.22%), Query Frame = 0
Query:   97 DIAKLSVLLPEIYHPNNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADTGVSFMDGELMTGFEKRWQ 230
            ++  L  LL  +YH ++ +LVH+D KA  +  + +   +            N + + PA  ++WGGF++TL  +YG+  AL W+  WDYFINLS SD P++ +DE+   LGEH     SF+ G     +E  W+
Sbjct:    7 ELPGLDALLRTLYHVDHFFLVHLDVKASAQARQGVESRIERVLDERGNGERNVRFVSPAMPITWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLL-KDEIAGILGEHKAGNTSFITG---FKYEPSWE 136          
BLAST of mRNA_Ecto-sp13_S_contig10080.111.1 vs. uniprot
Match: A0A835Z5M7_9STRA (Protein xylosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5M7_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 3.800e-18
Identity = 57/145 (39.31%), Postives = 84/145 (57.93%), Query Frame = 0
Query:   83 RRARLAFLIMSSGD-DIAKLSVLLPEIYHPNNIYLVHVDAKAP---REQTEKIRE---VVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADTGVSFMDGE 220
            R AR+A+ I  +GD +   L  LL  +YHP+N+Y +HVD+KA    R Q E + +   V R    A  G PSN  ++     V+WGG S+ L  +Y +A A+   E WDY++N+S SD P++ Q E+   L E A  G+SF+ G+
Sbjct:   45 REARIAYAITVAGDGEYHGLKRLLKYLYHPDNLYYIHVDSKATAMTRLQIEHLLKETWVKRPRTGAQVGLPSNLVMVGNPVSVAWGGLSLLLTSVYLMAVAVDSGERWDYWVNVSPSDMPMLPQSEIMELLAEPARRGMSFISGQ 189          
BLAST of mRNA_Ecto-sp13_S_contig10080.111.1 vs. uniprot
Match: A0A0Q3JP57_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3JP57_BRADI)

HSP 1 Score: 88.2 bits (217), Expect = 1.700e-16
Identity = 55/140 (39.29%), Postives = 82/140 (58.57%), Query Frame = 0
Query:   86 RLAFLIMSSGDDIAKLSVLLPEIYHPNNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEG------WDYFINLSTSDFPVVTQDE-MTLFLGEHADTGVSFMD 218
            R A+LI  S  D A L  +L  +YHP N Y++H+DA+AP      +   V ++   A  R  N +++E A +V++ G ++    L+  AAA LW EG      WD+F+NLS SD+P+VTQD+ M +F G     G+SF+D
Sbjct:  115 RFAYLISGSAGDAAMLRRVLLALYHPRNHYILHLDAQAPDSDRAGLAAFVASHRVLAAAR--NVRVVEKANLVTYRGPTMVTTTLHA-AAAFLWGEGRGKGADWDWFVNLSASDYPLVTQDDLMDVFSG--LPRGLSFID 249          
BLAST of mRNA_Ecto-sp13_S_contig10080.111.1 vs. uniprot
Match: A0A5A7R3H8_STRAF (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (Fragment) n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7R3H8_STRAF)

HSP 1 Score: 86.3 bits (212), Expect = 4.130e-16
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 0
Query:   84 RARLAFLIMSSGDDIAKLSVLLPEIYHPNNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEM 202
            +A  A+LI +S  D  +L  LL  +YHP N YLVHVDA AP  +  +I + V  +   A  R  N  ++    +V++ G ++  A L+GIAA L     WD+F+NLS +D+P+VTQD++
Sbjct:   24 KATFAYLISASSGDTVRLKRLLLALYHPANYYLVHVDAAAPEAEHREISKFVSNHSVFA--RVGNVWVVGKPSLVTYRGPTMLAATLHGIAALLRLAGDWDWFVNLSAADYPLVTQDDL 140          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10080.111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBR7_9PHAE5.240e-14392.31GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LDZ1_ECTSI3.680e-11695.56Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus... [more]
A0A6H5L6Q9_9PHAE6.000e-3045.71Protein xylosyltransferase n=2 Tax=Ectocarpus TaxI... [more]
A0A6H5L1U8_9PHAE5.640e-2539.16GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A835YZY2_9STRA8.260e-2243.70Core-2/I-branching enzyme-domain-containing protei... [more]
A0A6H5KJT8_9PHAE2.600e-2135.57Protein xylosyltransferase (Fragment) n=1 Tax=Ecto... [more]
D8LCA7_ECTSI6.990e-1935.07Protein xylosyltransferase n=1 Tax=Ectocarpus sili... [more]
A0A835Z5M7_9STRA3.800e-1839.31Protein xylosyltransferase n=1 Tax=Tribonema minus... [more]
A0A0Q3JP57_BRADI1.700e-1639.29Uncharacterized protein n=1 Tax=Brachypodium dista... [more]
A0A5A7R3H8_STRAF4.130e-1640.34Core-2/I-branching beta-1,6-N-acetylglucosaminyltr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003406Glycosyl transferase, family 14PFAMPF02485Branchcoord: 87..229
e-value: 1.4E-20
score: 73.9
NoneNo IPR availablePANTHERPTHR46025:SF3XYLOSYLTRANSFERASE OXTcoord: 75..220
NoneNo IPR availablePANTHERPTHR46025FAMILY NOT NAMEDcoord: 75..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..179
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..156
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 180..232
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10080contigEcto-sp13_S_contig10080:3814..5677 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10080.111.1mRNA_Ecto-sp13_S_contig10080.111.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10080 3814..5677 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10080.111.1 ID=prot_Ecto-sp13_S_contig10080.111.1|Name=mRNA_Ecto-sp13_S_contig10080.111.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
MFCSQRFVVVVGLLAALLVFAGVTLQGTWNVERSLSFTSVASHPTASGSS
AFGDGKEEIGEINSSSQHRGLFDRGARDGGGERRARLAFLIMSSGDDIAK
LSVLLPEIYHPNNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGK
LLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQD
EMTLFLGEHADTGVSFMDGELMTGFEKRWQVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003406Glyco_trans_14