mRNA_Ecto-sp13_S_contig11232.1095.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11232.1095.1 vs. uniprot
Match: D7FXU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU8_ECTSI) HSP 1 Score: 155 bits (392), Expect = 3.660e-44 Identity = 96/150 (64.00%), Postives = 100/150 (66.67%), Query Frame = 1
Query: 1 MAYATSIDGSVMHVTHTGTPSGDLEDRTIKPASLTRRTLLEANPRCMSKVEGLRAEIMEEREQEEGG---GRGPGSYKVEDGHRFGCSALRKARLSRATSEGARG*ALGGGDASVTNKGDLEVSVDESIVLPKSGPSWFGFLQNDSTYEV 441
M YATSIDGSV+H T TGTP GDLEDRTI P SLTRRTLLEA PRCMSKVEGLRAEIMEERE+ E GRG K+ F R RA A LG SVTN GDLEVSVD +VL KSGPSWFGF Q DSTYEV
Sbjct: 1 MVYATSIDGSVVHATATGTPPGDLEDRTIDPVSLTRRTLLEAIPRCMSKVEGLRAEIMEEREEAEKEAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAH--LGEATLSVTNTGDLEVSVDGFLVLRKSGPSWFGFRQKDSTYEV 148
BLAST of mRNA_Ecto-sp13_S_contig11232.1095.1 vs. uniprot
Match: D7FMM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM4_ECTSI) HSP 1 Score: 143 bits (360), Expect = 1.880e-36 Identity = 87/148 (58.78%), Postives = 97/148 (65.54%), Query Frame = 1
Query: 1 MAYATSIDGSVMHVTHTGTPSGDLEDRTIKPASLTRRTLLEANPRCMSKVEGLRAEIMEEREQ-EEGGGRGPGSYKVEDGHRFGCSALRKARLSRATSEGARG*ALGGGDASVTNKGDLEVSVDESIVLPKSGPSWFGFLQNDSTYEV 441
M YATSIDGSV+H T TGTP GDLEDR+I P S TRRTLLEANP+ MS VEGLRAEI+ E E+ E+ G G + + G K R + LG SVTNKGDLEVSVD SIVL KSGPSWFGF + DSTYEV
Sbjct: 313 MVYATSIDGSVVHATATGTPPGDLEDRSIDPVSQTRRTLLEANPQRMSIVEGLRAEIVAETEEAEKAAVEGQGLKRSKMVTVLGFLPFGKHGFRRRRARERAAAHLGEAALSVTNKGDLEVSVDGSIVLRKSGPSWFGFRKKDSTYEV 460
BLAST of mRNA_Ecto-sp13_S_contig11232.1095.1 vs. uniprot
Match: D7G0T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T0_ECTSI) HSP 1 Score: 130 bits (328), Expect = 2.810e-35 Identity = 76/130 (58.46%), Postives = 84/130 (64.62%), Query Frame = 2
Query: 179 RGSKKKAAVEGLGLTKLKMVTVLGVLPFGKHGFRGRRAREHAAEHLGEATLPSRTRETWRSQWTNPSSFRSPGLPGSGFSR--TTPRTR-SMDGVAVSRGGKYDWGIHVREPLAQVVPTTICIFEMHPDV 559
R +K AVEG GLTK KMVTVLG LPFGKHGFR RRAREH A HLGEATL + R GF + +T R + DGVAVSRGGKYDWGI REPLAQVVPTTIC F+ +P+V
Sbjct: 4 RDEAEKEAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHVAAHLGEATLSVTNKGDLEVSVDGSIVLRKSRPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREPLAQVVPTTICFFDKYPNV 133
BLAST of mRNA_Ecto-sp13_S_contig11232.1095.1 vs. uniprot
Match: A0A6H5JQZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ9_9PHAE) HSP 1 Score: 129 bits (324), Expect = 1.200e-32 Identity = 87/153 (56.86%), Postives = 95/153 (62.09%), Query Frame = 1
Query: 1 MAYATSIDGSVMHVTHTGTPSGDLEDRTIKPASLTRRTLLEANPRCMSKVEGLRAEIMEER---EQEEGGGRGPGSYK---VEDGHRFGCSALRKARLSRATSEGARG*ALGGGDASVTNKGDLEVSVDESIVLPKSGPSWFGFLQNDSTYEV 441
M YATSID V+ T TGTP GDLEDRT+ PAS TRRTLLEAN + MS VEGL+AEIM E E+E GRG K V FG R+ R + LG SVTNKGDLEVSVD SIVL KSGPSWFGF + D TYEV
Sbjct: 140 MVYATSIDCFVVRATATGTPPGDLEDRTVDPASQTRRTLLEANTQRMSIVEGLQAEIMAETAEAEKETVEGRGLKKSKMVAVLGFLPFGKHGFRRRRPREHAAAH-----LGEATLSVTNKGDLEVSVDGSIVLGKSGPSWFGFRKKDFTYEV 287
BLAST of mRNA_Ecto-sp13_S_contig11232.1095.1 vs. uniprot
Match: A0A6H5K6E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E6_9PHAE) HSP 1 Score: 120 bits (300), Expect = 1.670e-28 Identity = 71/129 (55.04%), Postives = 81/129 (62.79%), Query Frame = 2
Query: 200 AVEGLGLTKLKMVTVLGVLPFGKHGFRGRRAREHAAEHLGEATLPSRTRETWRSQWTNPSSFRSPGLPGSGFSR--TTPRTR-SMDGVAVSRGGKYDWGIHVREPLAQVVPTTICIFEMHPDV*FFGRL 577
A+EG L K MVTVLG LPFGKHGFR R AR+HAA H+GEATL R PG GF + +T R + DGVAVS+GGKYD GI REPLAQVVPTTIC + +PD+ FGRL
Sbjct: 265 AIEGRILKKSNMVTVLGFLPFGKHGFRRRPARKHAAAHIGEATLSVTNEGDLEVSVDGFIVLRKPGPSWFGFRQKYSTYEVRVTKDGVAVSQGGKYDLGIQAREPLAQVVPTTICFCDKYPDLWLFGRL 393
BLAST of mRNA_Ecto-sp13_S_contig11232.1095.1 vs. uniprot
Match: A0A6H5LGE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGE1_9PHAE) HSP 1 Score: 105 bits (262), Expect = 1.630e-23 Identity = 68/147 (46.26%), Postives = 70/147 (47.62%), Query Frame = 1
Query: 1 MAYATSIDGSVMHVTHTGTPSGDLEDRTIKPASLTRRTLLEANPRCMSKVEGLRAEIMEEREQEEGGGRGPGSYKVEDGHRFGCSALRKARLSRATSEGARG*ALGGGDASVTNKGDLEVSVDESIVLPKSGPSWFGFLQNDSTYEV 441
M YATSIDGSV+HVT TG PSGDLEDRTI+PASLTRRTLLEANPRCMSK EV VD SIVL KSGPSWFGFLQ D TYEV
Sbjct: 205 MVYATSIDGSVVHVTATGRPSGDLEDRTIEPASLTRRTLLEANPRCMSK---------------------------------------------------------------------EVLVDGSIVLRKSGPSWFGFLQKDFTYEV 282
BLAST of mRNA_Ecto-sp13_S_contig11232.1095.1 vs. uniprot
Match: D7G9A5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A5_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 8.140e-16 Identity = 50/110 (45.45%), Postives = 63/110 (57.27%), Query Frame = 2
Query: 188 KKKAAVEGLGLTKLKMVTVLGVLPFGKHGFRGRRAREHAAEHLGEATLPSRTRETWRSQWTNPSSFRSPGLPGSGFSRTTPRTRSM----DGVAVSRGGKYDWGIHVREP 505
KKKAA+EG L + K+ T++G LPFGKHGF RRAREHA H+GEATL + R G GF R T R+ + +GV +SR G YDWGI ++P
Sbjct: 18 KKKAALEGQTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHVGEATLSITKKGGLEVSVDGTVVLRKSGPSWFGF-RRTDRSYELRVTEEGVDISRRGMYDWGIKAQDP 126
BLAST of mRNA_Ecto-sp13_S_contig11232.1095.1 vs. uniprot
Match: D7G9B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B0_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 1.090e-13 Identity = 49/110 (44.55%), Postives = 63/110 (57.27%), Query Frame = 2
Query: 188 KKKAAVEGLGLTKLKMVTVLGVLPFGKHGFRGRRAREHAAEHLGEATLPSRTRETWRSQWTNPSSFRSPGLPGSGFSRTTPRTRSM----DGVAVSRGGKYDWGIHVREP 505
KK+AA+EG L + K+ T++G LPFGKHGF RRAREHA H+GEATL + R G GF R T R+ + +GV +SR G YDWGI ++P
Sbjct: 382 KKRAALEGRTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHMGEATLSITKKGGLEVSVDGIVVLRKSGPSWFGF-RRTDRSYELRVTEEGVVISRRGMYDWGIKAQDP 490
BLAST of mRNA_Ecto-sp13_S_contig11232.1095.1 vs. uniprot
Match: A0A6H5LDV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDV1_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 3.540e-12 Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 2
Query: 188 KKKAAVEGLGLTKL-KMVTVLGVLPFGKHGFRGRRAREHAAEHLGEATLPSRTRETWRSQWTNPSSFRSPGLPGSGFSRTTPRTR---SMDGVAVSRGGKYDWGI 490
K+KAA+EG L K K+ T++G LPFGK+GFRGRRAREHA H+GEATL + + R G GF ++ + +G+ +SR GK+DW +
Sbjct: 75 KRKAALEGRELPKEGKVDTLMGFLPFGKNGFRGRRAREHAEAHMGEATLSLTKKGNLEVAVDGMTVLRKSGPSWFGFRKSDSSYELRATEEGIVISRQGKFDWSV 179
BLAST of mRNA_Ecto-sp13_S_contig11232.1095.1 vs. uniprot
Match: D8LNB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB2_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 4.080e-11 Identity = 54/154 (35.06%), Postives = 78/154 (50.65%), Query Frame = 1
Query: 1 MAYATSIDGSVMHVTHTGTPSGDLEDRTIKPASLTRRTLLEANPRCMSKVEGLRAEIMEEREQEEGGGRGPGSYK------VEDGHRFGCSALRKARLSRATSEGARG*ALGGGDASVTNKGDLEVSVDESIVLPKSGPSWFGFLQN-DSTYEV 441
M Y + GSV+H + G + D E R I P +T++ N + MSK+E R+EI +R + R G K + FG + R+ R R +E L +TNKG+LEVS+D +IV KS PSWFGFL+ D +Y++
Sbjct: 1 MIYVSPNSGSVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAAREGGELKRSKMAAITGVLPFGKNGFRRRR-EREHAEAH----LMEATLKLTNKGNLEVSIDGTIVQRKSRPSWFGFLRRKDPSYKL 149 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11232.1095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11232.1095.1 >prot_Ecto-sp13_S_contig11232.1095.1 ID=prot_Ecto-sp13_S_contig11232.1095.1|Name=mRNA_Ecto-sp13_S_contig11232.1095.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp MAYATSIDGSVMHVTHTGTPSGDLEDRTIKPASLTRRTLLEANPRCMSKVback to top mRNA from alignment at Ecto-sp13_S_contig11232:1831..2853- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11232.1095.1 ID=mRNA_Ecto-sp13_S_contig11232.1095.1|Name=mRNA_Ecto-sp13_S_contig11232.1095.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1023bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11232:1831..2853- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11232:1831..2853- >mRNA_Ecto-sp13_S_contig11232.1095.1 ID=mRNA_Ecto-sp13_S_contig11232.1095.1|Name=mRNA_Ecto-sp13_S_contig11232.1095.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=309bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11232:1831..2853- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |