prot_Ecto-sp13_S_contig11216.1076.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11216.1076.1
Unique Nameprot_Ecto-sp13_S_contig11216.1076.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length82
Homology
BLAST of mRNA_Ecto-sp13_S_contig11216.1076.1 vs. uniprot
Match: D8LQF6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQF6_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 8.860e-42
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0
Query:    1 MVSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAVVVRAGVAVAPMKLGKIHRDNARERSAVKEAKGATQAQAKKR 82
            MVSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAV+VRAGVAVAPMKLGKIHRDNARERSAVKEAKGATQAQ KKR
Sbjct: 1087 MVSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAVMVRAGVAVAPMKLGKIHRDNARERSAVKEAKGATQAQGKKR 1168          
BLAST of mRNA_Ecto-sp13_S_contig11216.1076.1 vs. uniprot
Match: I2CR68_NANGC (U3 small nucleolar RNA-associated protein 14 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR68_NANGC)

HSP 1 Score: 87.8 bits (216), Expect = 4.270e-20
Identity = 42/58 (72.41%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    2 VSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAVVVRAGVAVAPMKLGKIHR 59
            V++VPYPFTSREQYERSLR+PIG EWNT+ +VR  TRPAV VRAG  V P+KL K HR
Sbjct:  105 VAQVPYPFTSREQYERSLRRPIGKEWNTTTAVREETRPAVKVRAGFLVEPIKLRKTHR 162          
BLAST of mRNA_Ecto-sp13_S_contig11216.1076.1 vs. uniprot
Match: W7U2D1_9STRA (Small nucleolar ribonucleoprotein complex subunit utp14 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2D1_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.580e-19
Identity = 42/58 (72.41%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    2 VSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAVVVRAGVAVAPMKLGKIHR 59
            V++VPYPFTSREQYERSLR+PIG EWNT+ +VR  TRPAV VRAG  V P+KL K HR
Sbjct:  230 VAQVPYPFTSREQYERSLRRPIGKEWNTTTAVREETRPAVKVRAGFLVEPIKLRKTHR 287          
BLAST of mRNA_Ecto-sp13_S_contig11216.1076.1 vs. uniprot
Match: A0A4D9D2C2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2C2_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.030e-18
Identity = 42/58 (72.41%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    2 VSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAVVVRAGVAVAPMKLGKIHR 59
            V++VPYPFTSREQYERSLR+PIG EWNT+ +VR  TRPAV VRAG  V P+KL K HR
Sbjct: 1065 VAQVPYPFTSREQYERSLRRPIGKEWNTTTAVREETRPAVKVRAGFLVEPIKLRKTHR 1122          
BLAST of mRNA_Ecto-sp13_S_contig11216.1076.1 vs. uniprot
Match: A0A835YMG1_9STRA (U3 small nucleolar RNA-associated protein 14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG1_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.280e-16
Identity = 32/58 (55.17%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    2 VSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAVVVRAGVAVAPMKLGKIHR 59
            ++++PYPFTS+EQYER++RQP+G EWNT  SVR +TRP V+ + G  + P+KL K  R
Sbjct:   78 IAQIPYPFTSKEQYERAMRQPLGPEWNTPSSVRELTRPQVIFQPGAVIDPLKLPKSAR 135          
BLAST of mRNA_Ecto-sp13_S_contig11216.1076.1 vs. uniprot
Match: A0A059LBX5_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LBX5_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 1.080e-14
Identity = 39/76 (51.32%), Postives = 52/76 (68.42%), Query Frame = 0
Query:    2 VSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAVVVRAGVAVAPMKLGKIHRDNARERSAVKEAKGATQA 77
             +EVP+PF SRE YERSLRQP+G ++NT  + RA+TRPAV+  AG  +APM+  +     ARE +A   AKG  +A
Sbjct:    6 TAEVPFPFESREAYERSLRQPLGRDFNTEAAFRALTRPAVLKDAGAIIAPMQFSRGLAKEAREGNAA--AKGRARA 79          
BLAST of mRNA_Ecto-sp13_S_contig11216.1076.1 vs. uniprot
Match: A0A1V9YG55_9STRA (U3 small nucleolar RNA-associated protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YG55_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.880e-14
Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 MVSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAVVVRAGVAVAPMKLGKIHRDNARE 64
            M + VPYPFTSREQYE ++R P+G +WNT++S  A+T PAV++RAG  + P++L K  ++ A E
Sbjct:  209 MCATVPYPFTSREQYEMAMRNPLGSDWNTTKSTNALTVPAVMLRAGKIIQPLQLTKEQKNQATE 272          
BLAST of mRNA_Ecto-sp13_S_contig11216.1076.1 vs. uniprot
Match: A0A225WXS1_9STRA (U3 small nucleolar RNA-associated protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXS1_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.170e-14
Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    1 MVSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAVVVRAGVAVAPMKLGKIHRDNARERSAVK 69
            MV +VPYPFTSRE+YE ++R P+G +WNTSQ    +T P ++  AG A+AP+ L K  R  A++  ++K
Sbjct:  839 MVKDVPYPFTSREEYEAAMRNPLGSDWNTSQVTNVLTAPKIMKHAGTAIAPLVLSKDDRKQAKKELSLK 907          
BLAST of mRNA_Ecto-sp13_S_contig11216.1076.1 vs. uniprot
Match: A0A397F2E1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F2E1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.500e-14
Identity = 30/54 (55.56%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 MVSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAVVVRAGVAVAPMKL 54
            MV+ VPYPFTSREQYE ++R P+G +WNT+++  AMT P V+ RAG  + P++L
Sbjct:   33 MVNTVPYPFTSREQYELAMRNPLGSDWNTARASNAMTVPEVMARAGKIIQPLRL 86          
BLAST of mRNA_Ecto-sp13_S_contig11216.1076.1 vs. uniprot
Match: A0A0P1A9F4_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9F4_PLAHL)

HSP 1 Score: 75.1 bits (183), Expect = 5.900e-14
Identity = 32/69 (46.38%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    1 MVSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAVVVRAGVAVAPMKLGKIHRDNARERSAVK 69
            M+ +VPYPFTSR++YE ++R P+G +WNTSQ    +T P ++  AG A+AP+KL K  R  A++  ++K
Sbjct:  781 MLKDVPYPFTSRQEYEAAMRNPLGSDWNTSQVTNVLTAPKIMKHAGTAIAPLKLSKEDRKFAKKELSLK 849          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11216.1076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQF6_ECTSI8.860e-4297.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
I2CR68_NANGC4.270e-2072.41U3 small nucleolar RNA-associated protein 14 n=1 T... [more]
W7U2D1_9STRA4.580e-1972.41Small nucleolar ribonucleoprotein complex subunit ... [more]
A0A4D9D2C2_9STRA2.030e-1872.41Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A835YMG1_9STRA2.280e-1655.17U3 small nucleolar RNA-associated protein 14 n=1 T... [more]
A0A059LBX5_9CHLO1.080e-1451.32Uncharacterized protein (Fragment) n=1 Tax=Helicos... [more]
A0A1V9YG55_9STRA1.880e-1451.56U3 small nucleolar RNA-associated protein (Fragmen... [more]
A0A225WXS1_9STRA3.170e-1447.83U3 small nucleolar RNA-associated protein n=1 Tax=... [more]
A0A397F2E1_9STRA3.500e-1455.56Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A0P1A9F4_PLAHL5.900e-1446.38Uncharacterized conserved protein n=1 Tax=Plasmopa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF04615Utp14coord: 1..53
e-value: 1.6E-23
score: 83.3
NoneNo IPR availablePANTHERPTHR14150:SF12U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 HOMOLOG A-RELATEDcoord: 2..72
IPR006709Small-subunit processome, Utp14PANTHERPTHR14150U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14coord: 2..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11216contigEcto-sp13_S_contig11216:4742..4987 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11216.1076.1mRNA_Ecto-sp13_S_contig11216.1076.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11216 4742..4999 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11216.1076.1 ID=prot_Ecto-sp13_S_contig11216.1076.1|Name=mRNA_Ecto-sp13_S_contig11216.1076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=82bp
MVSEVPYPFTSREQYERSLRQPIGGEWNTSQSVRAMTRPAVVVRAGVAVA
PMKLGKIHRDNARERSAVKEAKGATQAQAKKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006709SSU_processome_Utp14