prot_Ecto-sp13_S_contig11136.996.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11136.996.1
Unique Nameprot_Ecto-sp13_S_contig11136.996.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length128
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11136.996.1 vs. uniprot
Match: D8LM43_ECTSI (Ankyrin repeat Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM43_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 2.510e-44
Identity = 95/127 (74.80%), Postives = 101/127 (79.53%), Query Frame = 0 
Query:    1 MIRKADDHRARVEAKLDQVLEALSNSNGAGSAESRGRGSVSDATAPRAKLEQGAAGPPAVAGRESDRRETSPPGVTAAGRGREIGDGGQGRATGGDSGGDDRPRRVSSGGDLDEFIDHYHAEASRER 127
            MIR AD++RARVEAKLDQVLEALSNS GAG+ ES+G GSVSDATAPRAKLEQGAA PP VAGRESDRRETS PGV  AGRGREI DGGQGRATGG               DLDEFIDHYHAEA+ +R
Sbjct: 1181 MIRTADNNRARVEAKLDQVLEALSNSTGAGNTESKGHGSVSDATAPRAKLEQGAAAPPVVAGRESDRRETSSPGVVVAGRGREIDDGGQGRATGGXXXXXXXXXXXXXXXDLDEFIDHYHAEANIDR 1307
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11136.996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM43_ECTSI2.510e-4474.80Ankyrin repeat Transient receptor potential channe... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11136contigEcto-sp13_S_contig11136:2579..2962 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11136.996.1mRNA_Ecto-sp13_S_contig11136.996.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11136 1876..3060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11136.996.1 ID=prot_Ecto-sp13_S_contig11136.996.1|Name=mRNA_Ecto-sp13_S_contig11136.996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=128bp
MIRKADDHRARVEAKLDQVLEALSNSNGAGSAESRGRGSVSDATAPRAKL
EQGAAGPPAVAGRESDRRETSPPGVTAAGRGREIGDGGQGRATGGDSGGD
DRPRRVSSGGDLDEFIDHYHAEASRER*
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