prot_Ecto-sp13_S_contig1007.94.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1007.94.1
Unique Nameprot_Ecto-sp13_S_contig1007.94.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length197
Homology
BLAST of mRNA_Ecto-sp13_S_contig1007.94.1 vs. uniprot
Match: A0A6H5K5S7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5S7_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 1.890e-108
Identity = 183/199 (91.96%), Postives = 188/199 (94.47%), Query Frame = 0
Query:    2 QRSTMRVGDHALVLVSAMGLGEMGVLCKGIAAAKTCQLAVPAAESTRPRGNLGSERACGCGSARRLHWGFASRGRRVALGLRGGAPAVSDRYNARMQVMITRNMRKVLMDELGYAADEVDDMDPQIAAVVIEKSLPRPRAG---MPIAWRRSIRQTGSSSNPVHLLAGAVLAAIGAVVNGAVAVAAFPFVAAGKGVGAA 197
            ++STMR+GDHALVLVSA+GLGEMGVL KGIAAAKT QLAVPAAES RPRGNLGSERACGCGSARRLH GFASRGRRVALGLRGGA AVSDRYNARMQVMITRNMRKVLMDELGYAADEVDDMDPQIAAVVIEKSLPRPRAG   MPIAWRRSIRQTGSSSNPV LLAG VLAA+GAVVNG VAVAAFPFVAAGKGVGAA
Sbjct:   83 RQSTMRIGDHALVLVSALGLGEMGVLGKGIAAAKTYQLAVPAAESARPRGNLGSERACGCGSARRLHRGFASRGRRVALGLRGGALAVSDRYNARMQVMITRNMRKVLMDELGYAADEVDDMDPQIAAVVIEKSLPRPRAGEECMPIAWRRSIRQTGSSSNPVQLLAGVVLAAVGAVVNGVVAVAAFPFVAAGKGVGAA 281          
BLAST of mRNA_Ecto-sp13_S_contig1007.94.1 vs. uniprot
Match: D7FHC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHC4_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 8.670e-101
Identity = 163/174 (93.68%), Postives = 167/174 (95.98%), Query Frame = 0
Query:   24 MGVLCKGIAAAKTCQLAVPAAESTRPRGNLGSERACGCGSARRLHWGFASRGRRVALGLRGGAPAVSDRYNARMQVMITRNMRKVLMDELGYAADEVDDMDPQIAAVVIEKSLPRPRAGMPIAWRRSIRQTGSSSNPVHLLAGAVLAAIGAVVNGAVAVAAFPFVAAGKGVGAA 197
            MGVL KGIAAAKT QLAVPAAES RPRGNLGSERACGCGSARRLH  FASRGRR ALGLRGGAPAVSDRYNARMQV+ITRNMRKVLMDELGYAADEVDDMDPQIAAVVIEKSLPRPRAGMPIAWRRSIRQTGSSSNPV LLAGAVLAA+GAVVNGAVAV+AFPFVAAGKG+GAA
Sbjct:    1 MGVLGKGIAAAKTSQLAVPAAESARPRGNLGSERACGCGSARRLHRAFASRGRRAALGLRGGAPAVSDRYNARMQVIITRNMRKVLMDELGYAADEVDDMDPQIAAVVIEKSLPRPRAGMPIAWRRSIRQTGSSSNPVQLLAGAVLAAVGAVVNGAVAVSAFPFVAAGKGIGAA 174          
BLAST of mRNA_Ecto-sp13_S_contig1007.94.1 vs. uniprot
Match: A0A7S3MDN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDN6_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 7.050e-15
Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = 0
Query:   94 NARMQVMITRNMRKVLMDELGYAADEVDDMDPQIAAVVIEKSLPRPRAGMPIAWRRS 150
            +A++Q MIT  M+  L DELGY  +EV+DM+PQIA+VVIE+SL RP+ GMP++WRRS
Sbjct:   61 SAKVQFMITNKMKATLKDELGYLPEEVEDMEPQIASVVIERSLTRPKKGMPVSWRRS 117          
BLAST of mRNA_Ecto-sp13_S_contig1007.94.1 vs. uniprot
Match: A0A835YK24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK24_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.950e-14
Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0
Query:  105 MRKVLMDELGYAADEVDDMDPQIAAVVIEKSLPRPRAGMPIAWRRSIRQTGSSSNPVHLLAGAVLAAIGAVVNGAVAV 182
            MRK L D L Y  +EV+DM+PQIAA+VIEK LPRPRAGMPIAWR+S R+  S+S      A   LAAI  V  G VAV
Sbjct:    1 MRKTLTDSLHYTEEEVNDMEPQIAAIVIEKGLPRPRAGMPIAWRKSFRRRESASRGPSSRA---LAAIRGVAAGPVAV 75          
BLAST of mRNA_Ecto-sp13_S_contig1007.94.1 vs. uniprot
Match: W7TF16_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF16_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.000e-11
Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 0
Query:   85 GAPAVSDRYNARMQVMITRNMRKVLMDELGYAADEVDDMDPQIAAVVIEKSLPRPRAGMPIAWRR 149
            G     D+YNA+MQ +IT  M+KVL +EL Y A EV+ M P +AAVVI K L RP+ GMP  WR+
Sbjct:  204 GGNMKKDKYNAKMQWLITNKMKKVLREELHYEAAEVEAMMPDVAAVVINKHLERPKRGMPAEWRK 268          
BLAST of mRNA_Ecto-sp13_S_contig1007.94.1 vs. uniprot
Match: A0A7S2XQL8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQL8_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.180e-8
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0
Query:   97 MQVMITRNMRKVLMDELGYAADEVDDMDPQIAAVVIEKSLPRPRAGMPIAW 147
            +Q MIT NMR+VL+DELGY   EV  M P +AAVV++K L RP +GMP  W
Sbjct:  126 VQYMITLNMRRVLVDELGYLPREVKHMRPDVAAVVVDKMLKRPSSGMPTPW 176          
BLAST of mRNA_Ecto-sp13_S_contig1007.94.1 vs. uniprot
Match: A0A7S4IQ15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQ15_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.010e-5
Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 0
Query:   95 ARMQVMITRNMRKVLMDELGYAADEVDDMDPQIAAVVIEKSLPRPRAGMPIAWRR 149
            A +Q  ITRNMR++L+ ELGY   EV+ M P +AAV+  K L RP  GMP  + R
Sbjct:  196 ATVQYAITRNMRRLLVQELGYTRHEVERMKPDVAAVLTTKRLRRPGGGMPREFYR 250          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1007.94.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5K5S7_9PHAE1.890e-10891.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHC4_ECTSI8.670e-10193.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3MDN6_9STRA7.050e-1561.40Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A835YK24_9STRA1.950e-1460.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TF16_9STRA2.000e-1153.85Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2XQL8_9STRA1.180e-858.82Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S4IQ15_9STRA1.010e-550.91Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 190..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..189
NoneNo IPR availableTMHMMTMhelixcoord: 163..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1007contigEcto-sp13_S_contig1007:15362..19358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1007.94.1mRNA_Ecto-sp13_S_contig1007.94.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1007 15232..19358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1007.94.1 ID=prot_Ecto-sp13_S_contig1007.94.1|Name=mRNA_Ecto-sp13_S_contig1007.94.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=197bp
MQRSTMRVGDHALVLVSAMGLGEMGVLCKGIAAAKTCQLAVPAAESTRPR
GNLGSERACGCGSARRLHWGFASRGRRVALGLRGGAPAVSDRYNARMQVM
ITRNMRKVLMDELGYAADEVDDMDPQIAAVVIEKSLPRPRAGMPIAWRRS
IRQTGSSSNPVHLLAGAVLAAIGAVVNGAVAVAAFPFVAAGKGVGAA
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