prot_Ecto-sp13_S_contig1102.904.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1102.904.1
Unique Nameprot_Ecto-sp13_S_contig1102.904.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length419
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1102.904.1 vs. uniprot
Match: A0A6H5JG98_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG98_9PHAE)

HSP 1 Score: 761 bits (1965), Expect = 2.590e-268
Identity = 407/418 (97.37%), Postives = 411/418 (98.33%), Query Frame = 0 
Query:    1 MEEETARRDDEKRFKQLRRSAQEANALCTIFACVCTGYGGYALSFTVALGLGANVTSTYLLVAGGYLLLLAGAVGAWAARSGRPDAFRIHFGALLPAGALYASLTVVQLVSVGPSDRRVTQAWDNLNAEGESLYSVQTKVGTMLIVSGVLSVVTFALVVCAAVASRAARNALLHLPESSPHRHRRQGKLSRGERLAVAWALALAATSTFIDGSFAVFSAWLARDREQAGVWLLAIWEGMGRGDGRYVDGDTFIVSTAIIVATIVGPGAMLYAWAVYCRKGYRFSVGILVCAASLHTQLLRYVTSADSSESSAEPGSKAFFIAASVVLALLQVAGALAVLIFNVGRMTKRVHAAEVHYRALLLEHGRLSDKIETRDEGDGGEGAVAGPEQRGGALRKRKKDGDGTAATLGVTRRGTRST 418
            MEEETARRDDEKRFKQLRRSAQEANALCTIFACVCTGYGGYALSFT+ALGLGANVTSTYLLVAGGYLLLLAG VGAWAARSGRPDAFRIHFGALLPAGALYASLTVVQLVSVGPSDRRVTQAWDNL+AEG+SLYSVQTKVGTMLIVSGVLSVVTFALVVCAAVASRAARNALLHLPESSPHRHRRQGKLSRGERLAVAWALALAATSTFIDGSFAV SAWLARD EQAGVWLLAIWEGMGRGDGRYVDGDTFIVSTAIIVATIVGPGAMLYAWAVYCRKGYRFSVGILVCAASLHTQLLRYVTSADSSESSAEPGSKAFFIAASVVLALLQVAGALAVLIFNVGRMTKRVHAAEVHYRALLLEHGRLSDK+ETR EGDGGEGAV GPE RGGALRKRKKDGDGTAATLG TRRGTRST
Sbjct:  533 MEEETARRDDEKRFKQLRRSAQEANALCTIFACVCTGYGGYALSFTMALGLGANVTSTYLLVAGGYLLLLAGVVGAWAARSGRPDAFRIHFGALLPAGALYASLTVVQLVSVGPSDRRVTQAWDNLHAEGDSLYSVQTKVGTMLIVSGVLSVVTFALVVCAAVASRAARNALLHLPESSPHRHRRQGKLSRGERLAVAWALALAATSTFIDGSFAVISAWLARDGEQAGVWLLAIWEGMGRGDGRYVDGDTFIVSTAIIVATIVGPGAMLYAWAVYCRKGYRFSVGILVCAASLHTQLLRYVTSADSSESSAEPGSKAFFIAASVVLALLQVAGALAVLIFNVGRMTKRVHAAEVHYRALLLEHGRLSDKVETRHEGDGGEGAVGGPEHRGGALRKRKKDGDGTAATLGGTRRGTRST 950
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BLAST of mRNA_Ecto-sp13_S_contig1102.904.1 vs. uniprot
Match: D8LG14_ECTSI (CRAL/TRIO, N-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG14_ECTSI)

HSP 1 Score: 654 bits (1688), Expect = 1.990e-225
Identity = 352/356 (98.88%), Postives = 353/356 (99.16%), Query Frame = 0 
Query:    1 MEEETARRDDEKRFKQLRRSAQEANALCTIFACVCTGYGGYALSFTVALGLGANVTSTYLLVAGGYLLLLAGAVGAWAARSGRPDAFRIHFGALLPAGALYASLTVVQLVSVGPSDRRVTQAWDNLNAEGESLYSVQTKVGTMLIVSGVLSVVTFALVVCAAVASRAARNALLHLPESSPHRHRRQGKLSRGERLAVAWALALAATSTFIDGSFAVFSAWLARDREQAGVWLLAIWEGMGRGDGRYVDGDTFIVSTAIIVATIVGPGAMLYAWAVYCRKGYRFSVGILVCAASLHTQLLRYVTSADSSESSAEPGSKAFFIAASVVLALLQVAGALAVLIFNVGRMTKRVHAAEVH 356
            MEEETARRDDEKRFKQLRRSAQEANALCTIFACVCTGYGGYALSFTVALGLGANVTSTYLLVAGGYLLLLAGAVGAWAARSGRPDAFRIHFGALLPAGALYASLTVVQLVSVGPSDRRV QAWDNL+AEGESLYSVQTKVGTMLIVSGVLSVVTFALVVCAAVASRAARNALLHLPESSPHRHRRQGKLSRGERLAVAWALALAATSTFIDGSFAVFSAWLARD EQAGVWLLAIWEGMGRGDGRYVDGDTFIVSTAIIVATIVGPGAMLYAWAVYCRKGYRFSVGILVCAASLHTQLLRYVTSADSSESSAEPGSKAFFIAASVVLALLQVAGALAVLIFNVGRMTKRVHAAE H
Sbjct:  672 MEEETARRDDEKRFKQLRRSAQEANALCTIFACVCTGYGGYALSFTVALGLGANVTSTYLLVAGGYLLLLAGAVGAWAARSGRPDAFRIHFGALLPAGALYASLTVVQLVSVGPSDRRVMQAWDNLHAEGESLYSVQTKVGTMLIVSGVLSVVTFALVVCAAVASRAARNALLHLPESSPHRHRRQGKLSRGERLAVAWALALAATSTFIDGSFAVFSAWLARDGEQAGVWLLAIWEGMGRGDGRYVDGDTFIVSTAIIVATIVGPGAMLYAWAVYCRKGYRFSVGILVCAASLHTQLLRYVTSADSSESSAEPGSKAFFIAASVVLALLQVAGALAVLIFNVGRMTKRVHAAEKH 1027
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BLAST of mRNA_Ecto-sp13_S_contig1102.904.1 vs. uniprot
Match: A0A812WIG6_SYMMI (Ebp protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WIG6_SYMMI)

HSP 1 Score: 79.0 bits (193), Expect = 1.730e-12
Identity = 35/113 (30.97%), Postives = 72/113 (63.72%), Query Frame = 0 
Query:  189 LSRGERLAVAWALALAATSTFIDGSFAVFSAWLARDREQAGVWLLAIWEGMGRGDGRYVDGDTFIVSTAIIVATIVGPGAMLYAWAVYCRKGYRFSVGILVCAASLHTQLLRY 301
            ++  ++L + W++ +     +++G++A+F A+   D E +  W +++W+ MG+ D RY   D F+VS+  I+AT+VGP  ++YAW++   + +R   GI+V +  ++TQ+L +
Sbjct:  131 VTMSDKLILVWSILMGLFHIYLNGTYAMF-AYRIVDSESSSAWFISLWQHMGKYDTRYTTADDFLVSSNGIMATVVGPLLLVYAWSIVSGRSFRQVCGIVVNSVEIYTQVLYF 242
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BLAST of mRNA_Ecto-sp13_S_contig1102.904.1 vs. uniprot
Match: A0A7S3M4F2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4F2_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.370e-7
Identity = 32/90 (35.56%), Postives = 51/90 (56.67%), Query Frame = 0 
Query:  193 ERLAVAWALALAATSTFIDGSFAVFSAWLARDREQAGVWLLAIWEGMGRGDGRYVDGDTFIVSTAIIVATIVGPGAMLYAWAVYCRKGYR 282
            +R  +AW +     + F++GS AVF+   A + +  G W+ A+   +GR D R+++ D FI S+  I+A IVGP  + YAW  +    YR
Sbjct:  171 DRFLIAWGIFGGLFNIFVNGSLAVFARH-ADESQLKGSWMFALLNYLGRADSRFIESDPFIRSSMTILAAIVGPLMLFYAWTTFVYAPYR 259
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1102.904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JG98_9PHAE2.590e-26897.37CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
D8LG14_ECTSI1.990e-22598.88CRAL/TRIO, N-terminus family protein n=1 Tax=Ectoc... [more]
A0A812WIG6_SYMMI1.730e-1230.97Ebp protein n=1 Tax=Symbiodinium microadriaticum T... [more]
A0A7S3M4F2_9STRA1.370e-735.56Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007905Emopamil-binding proteinPFAMPF05241EBPcoord: 188..307
e-value: 2.2E-14
score: 53.3
IPR007905Emopamil-binding proteinPANTHERPTHR14207STEROL ISOMERASEcoord: 141..340
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 318..341
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 165..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 342..418
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 274..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 223..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 252..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 280..298
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 299..317
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..90
NoneNo IPR availableTMHMMTMhelixcoord: 90..112
NoneNo IPR availableTMHMMTMhelixcoord: 252..274
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 23..45
NoneNo IPR availableTMHMMTMhelixcoord: 318..340
NoneNo IPR availableTMHMMTMhelixcoord: 281..303
NoneNo IPR availableTMHMMTMhelixcoord: 142..164
NoneNo IPR availableTMHMMTMhelixcoord: 195..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1102contigEcto-sp13_S_contig1102:14835..16545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1102.904.1mRNA_Ecto-sp13_S_contig1102.904.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1102 14835..16558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1102.904.1 ID=prot_Ecto-sp13_S_contig1102.904.1|Name=mRNA_Ecto-sp13_S_contig1102.904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=419bp
MEEETARRDDEKRFKQLRRSAQEANALCTIFACVCTGYGGYALSFTVALG
LGANVTSTYLLVAGGYLLLLAGAVGAWAARSGRPDAFRIHFGALLPAGAL
YASLTVVQLVSVGPSDRRVTQAWDNLNAEGESLYSVQTKVGTMLIVSGVL
SVVTFALVVCAAVASRAARNALLHLPESSPHRHRRQGKLSRGERLAVAWA
LALAATSTFIDGSFAVFSAWLARDREQAGVWLLAIWEGMGRGDGRYVDGD
TFIVSTAIIVATIVGPGAMLYAWAVYCRKGYRFSVGILVCAASLHTQLLR
YVTSADSSESSAEPGSKAFFIAASVVLALLQVAGALAVLIFNVGRMTKRV
HAAEVHYRALLLEHGRLSDKIETRDEGDGGEGAVAGPEQRGGALRKRKKD
GDGTAATLGVTRRGTRST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007905EBP