prot_Ecto-sp13_S_contig110.885.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig110.885.1
Unique Nameprot_Ecto-sp13_S_contig110.885.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length437
Homology
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BLAST of mRNA_Ecto-sp13_S_contig110.885.1 vs. uniprot
Match: D7FJH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJH6_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 2.580e-51
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 0 
Query:  259 MSVPSTRKIQLVIAHTAEKTIEVPGFEAFMKMQHGKDALFRFLAADHALHSYYLLAKKHVQEIVMRGGKAKGACATAEPSSAPAAALKAPNDKTEDP 355
            MSVP TRKIQLVIAHTAEKTIEVPGFEAFMKMQHG+DALFRFLAADHALHSYYLLAKKHVQEIVM+GGKAKGACA AEPSSAPAA LKAP+DKTEDP
Sbjct:    1 MSVPPTRKIQLVIAHTAEKTIEVPGFEAFMKMQHGRDALFRFLAADHALHSYYLLAKKHVQEIVMKGGKAKGACAAAEPSSAPAATLKAPSDKTEDP 97
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BLAST of mRNA_Ecto-sp13_S_contig110.885.1 vs. uniprot
Match: A0A6H5L358_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L358_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 1.840e-29
Identity = 68/94 (72.34%), Postives = 76/94 (80.85%), Query Frame = 0 
Query:  140 LEGAMTSANERHARTLEAIQAQRASFAPTAFPPSTSVVEKNDGLPEAEPAPAPTPAXXXXXXXXXAAAAGDDVGSTTENVELESVAAFIASYAG 233
            L+ AM SAN+R+ART+EAIQAQRASFAPT  PPST VV+++DGLPEAE  PAPTP          AAAA DDVGSTTENV+LESVAAFIASYAG
Sbjct:   86 LDDAMASANKRYARTVEAIQAQRASFAPTVIPPSTLVVDEDDGLPEAESTPAPTPGAEESEKEEMAAAASDDVGSTTENVKLESVAAFIASYAG 179
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig110.885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJH6_ECTSI2.580e-5193.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L358_9PHAE1.840e-2972.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040397Suppressor of white apricotPANTHERPTHR13161SPLICING FACTOR SUPPRESSOR OF WHITE APRICOTcoord: 199..317
NoneNo IPR availablePANTHERPTHR13161:SF15SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOGcoord: 199..317
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 247..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig110contigEcto-sp13_S_contig110:28052..31365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig110.885.1mRNA_Ecto-sp13_S_contig110.885.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig110 28052..31708 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig110.885.1 ID=prot_Ecto-sp13_S_contig110.885.1|Name=mRNA_Ecto-sp13_S_contig110.885.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=437bp
MDAVFEVSSGPREAVSALTGMSPFPAVAVSSSSSSEDKGPENACMSSSMS
PPAPPSSPPQPPLSPPPSSSPPPPSPPPSPLSLSPSSSSCSSSSSSSSSS
IASAASISAAAAAAAAAAAAAAASTEAAASRAASKAAAALEGAMTSANER
HARTLEAIQAQRASFAPTAFPPSTSVVEKNDGLPEAEPAPAPTPAAEESE
EEEMAAAAGDDVGSTTENVELESVAAFIASYAGEQDAAAKANRLPTKPSE
PPFLVPRGMSVPSTRKIQLVIAHTAEKTIEVPGFEAFMKMQHGKDALFRF
LAADHALHSYYLLAKKHVQEIVMRGGKAKGACATAEPSSAPAAALKAPND
KTEDPGERNGTETTEECVVNFLLQSSLLCWQVEGAPDTEVLLYNPNSVTT
TATDSSSRTWYSLVVFQPLSTRGCCRVSPMVDTIAM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040397SWAP
IPR035967SWAP/Surp_sf