prot_Ecto-sp13_S_contig1006.82.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1006.82.1
Unique Nameprot_Ecto-sp13_S_contig1006.82.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length857
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1006.82.1 vs. uniprot
Match: D8LSX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX4_ECTSI)

HSP 1 Score: 1158 bits (2996), Expect = 0.000e+0
Identity = 625/724 (86.33%), Postives = 636/724 (87.85%), Query Frame = 0 
Query:  134 MFPKREAIQQLKDRLQAWCSEENRREQEGVSLPGGTSREDRAPRRWQAYEFIPLPSRNRTLDSEVLGMNVGRPVNDTRLEVTVDFETEDEAREVGMRLLDMMADVSREPNEVFGYADDAVTGGQQLGPWKKSGSVNSWRKWLELGNGEDPLPESAVTVFRTVQANWADPNKIAAAMNFTVFWSNARMEESIADPTTPLRRVEVLHSALHPHVIKIAETFASSDAMLDHFHRHYDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLSATLPTGTMVPLVAIGGAEDGVSPPTMVVLEGLKLGVRHFVLEVSSSGVNEAVEGLQAALAFGVVKRDDLFVTMIVGESSSVXXXXXXIAAAVSETLALGRVDDGGIEADGTATRLLDSVDALVQLSTATPMARYFDDDRQFLEMWDEAHQAAASLPRESTGLPAAPTEQTDLDTPVDDDPFGSPFDSGSPGGSFDESSYDDSSVVGESRPFDIPADSLAXXXXXXXXXXXXXADGSNDELDSRLGIHLGVGGHGPKVADRLALLVDQSPAAGAAA-DVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEAGKGAAAAADYEHEDVTGDEVLAKWVMEIDGGVVWRPREVKEVARVLPLARYYLPPEWMTEIADRGGCPPEAWARTLSRLCPSEGTPSEEQLGAEVEETVAGLMTPDDGEEADGVGDSYDGLWGMGEDE 856
            MFPKREA+QQLKDRLQAWC+EENRREQE VSLPGGTSREDR PRRWQAYEFIPLPSRNRTLDSEVLGMNVGR VNDTRLEVTVDFE EDEA EVGMRLLDMMADVSREPNEVFGYADDAVTGGQQLGPWKKSGSVNSWRKWLELG+GEDPLPESAVTVFRTVQANWADPNKIAAAMNFTVFWSNARMEES+ADPTTPLRRVEVLHSALHPHVIKIAETFASSDAMLDHFHR+YDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLSATLPTG +VPLVAIGGAEDGVSPPTM+VLEGLKLGVRHFVLEV SSGV EAVEGLQAALAFGVVKRD LFVTMIVGES+S       IAAAVSETLA GRVDDGGIE DGTATRLLDSVDALV    A     YFDDDR FLEMWDEAHQAAAS PRESTGLPA PTEQT LDTP DDDPFGS                                    XXXXXXXXXXXXX              HLGVGGHG KVADRLALLVDQSPAAGAAA DVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLE AGGRGAEEA KGAAAAADYEHEDVT DEVLAKWVMEIDGGVVWRPREVKEVARVLPLARYYLPPEW++EIADRGGCPPEAWARTLSRLCPSEGTPSEEQLGAEVEETVAGLMTPDDGEEADGVGDSYDGLWGM +DE
Sbjct:    1 MFPKREAVQQLKDRLQAWCAEENRREQEDVSLPGGTSREDRPPRRWQAYEFIPLPSRNRTLDSEVLGMNVGRSVNDTRLEVTVDFEKEDEALEVGMRLLDMMADVSREPNEVFGYADDAVTGGQQLGPWKKSGSVNSWRKWLELGDGEDPLPESAVTVFRTVQANWADPNKIAAAMNFTVFWSNARMEESMADPTTPLRRVEVLHSALHPHVIKIAETFASSDAMLDHFHRNYDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLSATLPTGAIVPLVAIGGAEDGVSPPTMIVLEGLKLGVRHFVLEVGSSGVKEAVEGLQAALAFGVVKRDHLFVTMIVGESNSAVAGGRGIAAAVSETLASGRVDDGGIETDGTATRLLDSVDALV---LARESGEYFDDDRLFLEMWDEAHQAAASPPRESTGLPAVPTEQTGLDTPADDDPFGSXX------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGVGGHGSKVADRLALLVDQSPAAGAAAADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLECAGGRGAEEARKGAAAAADYEHEDVTDDEVLAKWVMEIDGGVVWRPREVKEVARVLPLARYYLPPEWISEIADRGGCPPEAWARTLSRLCPSEGTPSEEQLGAEVEETVAGLMTPDDGEEADGVGDSYDGLWGMDDDE 697
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BLAST of mRNA_Ecto-sp13_S_contig1006.82.1 vs. uniprot
Match: A0A6H5L373_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L373_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 5.070e-102
Identity = 181/218 (83.03%), Postives = 185/218 (84.86%), Query Frame = 0 
Query:  530 MARYFDDDRQFLEMWDEAHQAAASLPRESTGLPAAPTEQTDLDTPVDDDPFGSPFDSGSPGGSFDESSYDDSSVVGESRPFDIPADSLAXXXXXXXXXXXXXAD--GSNDELDSRLGIHLGVGGHGPKVADRLALLVDQSPAAGAAADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEAGKGAAAAADYEHEDVTG 745
            MARYFDDDRQFLEMWDEAH AAASLPRESTGLPAAPTEQTDLDTPVDD+PF             D SS DD+SVVGE RPFD PADSL          XXXX    GSNDELDSRLG HLGVGGHGPKVADRLALLVDQSPAAG+AADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEAGKGAAAAADYEHEDV+G
Sbjct:    1 MARYFDDDRQFLEMWDEAHHAAASLPRESTGLPAAPTEQTDLDTPVDDNPFXXXXXXXXXXXXXDGSSSDDNSVVGEGRPFDFPADSLTADSPAAESSXXXXXXXXGSNDELDSRLGSHLGVGGHGPKVADRLALLVDQSPAAGSAADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEAGKGAAAAADYEHEDVSG 218
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1006.82.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSX4_ECTSI0.000e+086.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L373_9PHAE5.070e-10283.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 22..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..856
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..40
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1006contigEcto-sp13_S_contig1006:4577..16257 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1006.82.1mRNA_Ecto-sp13_S_contig1006.82.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1006 4577..17576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1006.82.1 ID=prot_Ecto-sp13_S_contig1006.82.1|Name=mRNA_Ecto-sp13_S_contig1006.82.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=857bp
MKHSRAARNTAVGVMNCCRRPFTAAIVALLFLSTAPLVCSFFSPVPTATS
SFLSSRLWAAAGGGQDQDVLRSAGPRASRCRQSRARGGVTMERPSGQFNR
LAKPAFDRDNPNAVLGEVKVPGLEQVCMVAQTQMFPKREAIQQLKDRLQA
WCSEENRREQEGVSLPGGTSREDRAPRRWQAYEFIPLPSRNRTLDSEVLG
MNVGRPVNDTRLEVTVDFETEDEAREVGMRLLDMMADVSREPNEVFGYAD
DAVTGGQQLGPWKKSGSVNSWRKWLELGNGEDPLPESAVTVFRTVQANWA
DPNKIAAAMNFTVFWSNARMEESIADPTTPLRRVEVLHSALHPHVIKIAE
TFASSDAMLDHFHRHYDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLSA
TLPTGTMVPLVAIGGAEDGVSPPTMVVLEGLKLGVRHFVLEVSSSGVNEA
VEGLQAALAFGVVKRDDLFVTMIVGESSSVVAGGGGIAAAVSETLALGRV
DDGGIEADGTATRLLDSVDALVQLSTATPMARYFDDDRQFLEMWDEAHQA
AASLPRESTGLPAAPTEQTDLDTPVDDDPFGSPFDSGSPGGSFDESSYDD
SSVVGESRPFDIPADSLAADSPAAESSSSSSADGSNDELDSRLGIHLGVG
GHGPKVADRLALLVDQSPAAGAAADVPGTVPRKLPSLYFGDLRAGDGAAT
TATIELCRERGVQAFSLEYAGGRGAEEAGKGAAAAADYEHEDVTGDEVLA
KWVMEIDGGVVWRPREVKEVARVLPLARYYLPPEWMTEIADRGGCPPEAW
ARTLSRLCPSEGTPSEEQLGAEVEETVAGLMTPDDGEEADGVGDSYDGLW
GMGEDE*
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