prot_Ecto-sp13_S_contig100571.80.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig100571.80.1
Unique Nameprot_Ecto-sp13_S_contig100571.80.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
BLAST of mRNA_Ecto-sp13_S_contig100571.80.1 vs. uniprot
Match: A0A1I9LVU6_9PHAE (50S ribosomal protein L5, chloroplastic n=14 Tax=Phaeophyceae TaxID=2870 RepID=A0A1I9LVU6_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 1.260e-51
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
Query:    1 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPLT 83
            MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPLT
Sbjct:  104 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPLT 186          
BLAST of mRNA_Ecto-sp13_S_contig100571.80.1 vs. uniprot
Match: A0A0R6LUT7_UNDPI (50S ribosomal protein L5, chloroplastic n=24 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6LUT7_UNDPI)

HSP 1 Score: 164 bits (415), Expect = 5.930e-50
Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 0
Query:    1 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPLTD 84
            MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKG NISIVTTA+TK EGIALLKEFGFPLTD
Sbjct:  104 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAQTKIEGIALLKEFGFPLTD 187          
BLAST of mRNA_Ecto-sp13_S_contig100571.80.1 vs. uniprot
Match: A0A141BSM9_9PHAE (50S ribosomal protein L5, chloroplastic n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSM9_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 2.410e-49
Identity = 78/84 (92.86%), Postives = 83/84 (98.81%), Query Frame = 0
Query:    1 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPLTD 84
            MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEI+YENVDQI+GLNISIVTTAKTK+EG+ALLKEFGFPL +
Sbjct:  104 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEINYENVDQIRGLNISIVTTAKTKSEGVALLKEFGFPLNE 187          
BLAST of mRNA_Ecto-sp13_S_contig100571.80.1 vs. uniprot
Match: A0A8F0F770_9PHAE (50S ribosomal protein L5, chloroplastic n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F770_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.790e-48
Identity = 77/84 (91.67%), Postives = 80/84 (95.24%), Query Frame = 0
Query:    1 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPLTD 84
            MY FLEKL+HLVLPRIRDFRGLS KGFDR GNYNFGL+EQLVFPEI+YENVDQIKG NISIVTTAKTKNEGIALLKEFGFPLTD
Sbjct:  104 MYTFLEKLVHLVLPRIRDFRGLSSKGFDREGNYNFGLQEQLVFPEINYENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPLTD 187          
BLAST of mRNA_Ecto-sp13_S_contig100571.80.1 vs. uniprot
Match: A0A2R4QQ29_9PHAE (50S ribosomal protein L5, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ29_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 3.950e-48
Identity = 77/82 (93.90%), Postives = 82/82 (100.00%), Query Frame = 0
Query:    1 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPL 82
            MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISY++VDQ+KGLNISIVTTA+TK+EGIALLKEFGFPL
Sbjct:  104 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYDSVDQVKGLNISIVTTAQTKSEGIALLKEFGFPL 185          
BLAST of mRNA_Ecto-sp13_S_contig100571.80.1 vs. uniprot
Match: A0A8E6D6M4_9PHAE (50S ribosomal protein L5, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6M4_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 1.310e-46
Identity = 73/84 (86.90%), Postives = 80/84 (95.24%), Query Frame = 0
Query:    1 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPLTD 84
            MY FLEKLIHLVLPRIRDFRGLSLKGFDR GNYNFGL+EQL FPEI+YE++DQ++G NISIVTTAKT+NEGIALLKEFGFPLTD
Sbjct:  104 MYIFLEKLIHLVLPRIRDFRGLSLKGFDREGNYNFGLREQLAFPEINYESIDQLRGFNISIVTTAKTRNEGIALLKEFGFPLTD 187          
BLAST of mRNA_Ecto-sp13_S_contig100571.80.1 vs. uniprot
Match: A0A2I4Q2J9_9PHAE (50S ribosomal protein L5, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2J9_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 4.310e-45
Identity = 74/84 (88.10%), Postives = 79/84 (94.05%), Query Frame = 0
Query:    1 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPLTD 84
            MY FLEKLIHLVLPRIRDFRGLS K FDRNGNY+FGL+EQLVFPEISYENVDQI+GLNISIVTTAKT+ EGIALLKEFGFPL +
Sbjct:  104 MYTFLEKLIHLVLPRIRDFRGLSTKNFDRNGNYHFGLQEQLVFPEISYENVDQIRGLNISIVTTAKTQAEGIALLKEFGFPLIE 187          
BLAST of mRNA_Ecto-sp13_S_contig100571.80.1 vs. uniprot
Match: B7T1X2_VAULI (50S ribosomal protein L5, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1X2_VAULI)

HSP 1 Score: 146 bits (368), Expect = 7.700e-43
Identity = 67/84 (79.76%), Postives = 81/84 (96.43%), Query Frame = 0
Query:    1 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPLTD 84
            MY+FLEKLIHLVLPRIRDFRGLS+KGFD+NGN+NFG++EQLVFPEI+Y+ ++Q +GLNI+IV+TAKTK+EGIALLKEFGFPL D
Sbjct:  102 MYSFLEKLIHLVLPRIRDFRGLSIKGFDKNGNFNFGIREQLVFPEINYDIINQTRGLNITIVSTAKTKDEGIALLKEFGFPLID 185          
BLAST of mRNA_Ecto-sp13_S_contig100571.80.1 vs. uniprot
Match: A0A7S6ZPC4_9STRA (50S ribosomal protein L5, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPC4_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.610e-42
Identity = 68/84 (80.95%), Postives = 78/84 (92.86%), Query Frame = 0
Query:    1 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPLTD 84
            MY FLEKLIHLVLPR+RDFRGLS KGFD+ GNYNFGL+EQLVFPEI+Y++VD+ +G NISIVTTAKTK+EGI+LLKEFGFPL D
Sbjct:  107 MYDFLEKLIHLVLPRVRDFRGLSTKGFDKFGNYNFGLQEQLVFPEINYDDVDKTRGFNISIVTTAKTKDEGISLLKEFGFPLVD 190          
BLAST of mRNA_Ecto-sp13_S_contig100571.80.1 vs. uniprot
Match: A0A8E5BGR0_9PHAE (50S ribosomal protein L5, chloroplastic n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BGR0_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.660e-37
Identity = 63/82 (76.83%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPL 82
            MY FL KLIHLVLPRIRDFRGLS+KGFDR GNYNFGLKEQLVFPEI+YE+V +I G NIS+VTTA+T+ EG  LL++FGFP+
Sbjct:  103 MYEFLTKLIHLVLPRIRDFRGLSIKGFDRKGNYNFGLKEQLVFPEINYEDVKKINGFNISLVTTAQTEVEGKYLLEQFGFPI 184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig100571.80.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1I9LVU6_9PHAE1.260e-51100.0050S ribosomal protein L5, chloroplastic n=14 Tax=P... [more]
A0A0R6LUT7_UNDPI5.930e-5096.4350S ribosomal protein L5, chloroplastic n=24 Tax=P... [more]
A0A141BSM9_9PHAE2.410e-4992.8650S ribosomal protein L5, chloroplastic n=14 Tax=S... [more]
A0A8F0F770_9PHAE2.790e-4891.6750S ribosomal protein L5, chloroplastic n=1 Tax=Pr... [more]
A0A2R4QQ29_9PHAE3.950e-4893.9050S ribosomal protein L5, chloroplastic n=3 Tax=Fu... [more]
A0A8E6D6M4_9PHAE1.310e-4686.9050S ribosomal protein L5, chloroplastic n=1 Tax=Is... [more]
A0A2I4Q2J9_9PHAE4.310e-4588.1050S ribosomal protein L5, chloroplastic n=1 Tax=Di... [more]
B7T1X2_VAULI7.700e-4379.7650S ribosomal protein L5, chloroplastic n=1 Tax=Va... [more]
A0A7S6ZPC4_9STRA3.610e-4280.9550S ribosomal protein L5, chloroplastic n=1 Tax=Sc... [more]
A0A8E5BGR0_9PHAE1.660e-3776.8350S ribosomal protein L5, chloroplastic n=1 Tax=Ph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022803Ribosomal protein L5 domain superfamilyGENE3D3.30.1440.10coord: 1..84
e-value: 1.5E-33
score: 117.7
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 1..82
IPR031309Ribosomal protein L5, C-terminalPFAMPF00673Ribosomal_L5_Ccoord: 1..81
e-value: 2.8E-31
score: 107.5
NoneNo IPR availablePANTHERPTHR11994:SF454S RIBOSOMAL PROTEIN L7, MITOCHONDRIALcoord: 1..82
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig100571contigEcto-sp13_S_contig100571:208..462 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig100571.80.1mRNA_Ecto-sp13_S_contig100571.80.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig100571 208..477 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig100571.80.1 ID=prot_Ecto-sp13_S_contig100571.80.1|Name=mRNA_Ecto-sp13_S_contig100571.80.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
MYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYEN
VDQIKGLNISIVTTAKTKNEGIALLKEFGFPLTD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022803Ribosomal_L5_dom_sf
IPR031309Ribosomal_L5_C
IPR002132Ribosomal_L5