prot_Ecto-sp13_S_contig109.802.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig109.802.1
Unique Name	prot_Ecto-sp13_S_contig109.802.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	1773

Homology

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BLAST of mRNA_Ecto-sp13_S_contig109.802.1 vs. uniprot
Match: D8LU71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU71_ECTSI)

HSP 1 Score: 1502 bits (3888), Expect = 0.000e+0
Identity = 800/843 (94.90%), Postives = 815/843 (96.68%), Query Frame = 0

Query:   95 DEAAADDIEERPGMMASSTNSVASEALDEFNYGNEASADDEVFQRQMKATAKACLRSLHAILKHKWVRLDPLLEGIKEDLLRMLVSCS-----ALSPSLIVLRHVSGVLGNLSRVIVASSSDEGGPPRWKSRITVFDALKRLAYVDDQRLAFRTSAILYGLTRKRDYVNILPDLRGLGDVIFKLFRSGVPQTQNYCLQAFCNMAHNKYFAASIASDPDLMEGFIVGCMVHTNSSYMKEMSSEVLYYLISNPSTRLTALKGQGLWALVQLADANGSTVSMRLALLALFNLACDLRENARWLNENTVAAVLDFDDEVLGAPAFTGLLYLASTHHRRLSQMLISTRMALEARVKIEGAKFLKRDRALEEDKKFMARTTAALKPGDDEGNDSSSEEENTADRQRSFSKSKYFGYKQQGRLRRTFVASHLMPTLATVYNLCCKSGKATKLFFRKNIPEAVAGLLEEMRKAQDETYYHSQVEIMCVAVLTKMIENAALVPKLIERHVTPAITQGLDSRIVAVRLASLWSLLLLGIPGSGKNDDTATAAPASAGKDHAGSGTQVRMWMLFCREAVVECKAVSALWILWESTAATLEAGAREHMRYAIATVTRIFFMDKVAASAAVKQRGAELLALTMDFSADSRAVSPLSLVGGDDSDFDESSSPLVKVTALCCAVVTVHLPDMPAKAVQSVCEGCLDVFLKVLPTEEHEVRDLCSLAMRCLSGNEELLLDLLSDPSRFTTVLRVLLEEATPVGGMHIEAVLKRVVVLSAVPGVADLSPALLNLTDYVFQRRAGGPSRAPTKLTFSAAPPEVGGRAASGWAASQSTNGSVSSTRGAGVRGSKAAMNSGTG 932
            +EAAADDIEERP MMAS T+SVASE LDEFNYGNEA+ADDEVFQRQM+ATAKACLRSLHAILKHKWVRLDPLLEG+KEDLLRMLVSCS     ALSP L+VLRHVSGVLGNLSRVIVASSSDEGGPPRWKSRIT+FDALKRLA VDDQRLAFRTSAILYGLTRKRDYVNILPDLRGLGDVIFKLFRSGVPQTQNYCLQAFCNMAHNK FAASIASDPDLMEGFIVGCMVHTNSSYMKEMSSEVLYYLISNPSTRLTALKGQGLWALVQLADANGSTVSMRLALLALFNLACDLRENARWLNENTVAAVLDFDDEVLGAPAFTGLLYLASTHHRRLSQMLISTRMALEARVKIEGAKFLKRDRALEEDKKFMARTTAALKPGDDEGNDSSSEEEN  DRQRSFSKSKYFGYKQQGRLRRTFVASHLMPTLATVYNLCCKSGKATKLFFRKNIPEAV GLLEEMRKAQDETYYH QVEIMCVAVL+ MIENAALVPKLIERHVTPAITQGLDSRIVAVRLASLWSLLLLGIPGSG NDDT TAAPASAGKDHAG GTQVRMWMLFCREAVVECKAVSALW LWESTAATLEAGAREHMRYAI+TVTRIFFMDKVAASAAVKQRGAELLALTMDFSADSRAVS LSLVG DDSD+DE+SS LVKV+ALCCAVVTVHLPDMPAKAVQSVCEGCLDVFLKVLPTEEHEVRDLCSLAMRCLSGNEELLLDLLSDP RFTTVL+VLLEEAT VGGMHIEAVLKRVVVLSAVPGVADLSPALLNLTDYVFQRRAGG SRAPTKLTFSAAPP+VGGRAASG AASQSTNGSVSSTRGAGVRGSKAAMNS +G
Sbjct:   20 EEAAADDIEERPDMMASFTDSVASEVLDEFNYGNEATADDEVFQRQMRATAKACLRSLHAILKHKWVRLDPLLEGMKEDLLRMLVSCSVAGTQALSPRLVVLRHVSGVLGNLSRVIVASSSDEGGPPRWKSRITLFDALKRLACVDDQRLAFRTSAILYGLTRKRDYVNILPDLRGLGDVIFKLFRSGVPQTQNYCLQAFCNMAHNKDFAASIASDPDLMEGFIVGCMVHTNSSYMKEMSSEVLYYLISNPSTRLTALKGQGLWALVQLADANGSTVSMRLALLALFNLACDLRENARWLNENTVAAVLDFDDEVLGAPAFTGLLYLASTHHRRLSQMLISTRMALEARVKIEGAKFLKRDRALEEDKKFMARTTAALKPGDDEGNDSSSEEENATDRQRSFSKSKYFGYKQQGRLRRTFVASHLMPTLATVYNLCCKSGKATKLFFRKNIPEAVTGLLEEMRKAQDETYYHPQVEIMCVAVLSTMIENAALVPKLIERHVTPAITQGLDSRIVAVRLASLWSLLLLGIPGSGNNDDTTTAAPASAGKDHAGGGTQVRMWMLFCREAVVECKAVSALWTLWESTAATLEAGAREHMRYAISTVTRIFFMDKVAASAAVKQRGAELLALTMDFSADSRAVSALSLVGEDDSDYDETSSALVKVSALCCAVVTVHLPDMPAKAVQSVCEGCLDVFLKVLPTEEHEVRDLCSLAMRCLSGNEELLLDLLSDP-RFTTVLKVLLEEATSVGGMHIEAVLKRVVVLSAVPGVADLSPALLNLTDYVFQRRAGGSSRAPTKLTFSAAPPKVGGRAASGRAASQSTNGSVSSTRGAGVRGSKAAMNSVSG 861

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig109.802.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig109.802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LU71_ECTSI	0.000e+0	94.90	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 117..437 e-value: 3.8E-8 score: 34.4
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 224..616

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig109	contig	Ecto-sp13_S_contig109:16802..38463 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig109.802.1	mRNA_Ecto-sp13_S_contig109.802.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig109 16802..38463 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig109.802.1 ID=prot_Ecto-sp13_S_contig109.802.1|Name=mRNA_Ecto-sp13_S_contig109.802.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1773bp
RECATGALCNLARKPWITVEICKETKMMQTLLTSIGVALAHGEEGTSTLA
ANGLWNLISRFSQDRQFVQECFAQGVVGSLCGAAKGAADLLSALDEAAAD
DIEERPGMMASSTNSVASEALDEFNYGNEASADDEVFQRQMKATAKACLR
SLHAILKHKWVRLDPLLEGIKEDLLRMLVSCSALSPSLIVLRHVSGVLGN
LSRVIVASSSDEGGPPRWKSRITVFDALKRLAYVDDQRLAFRTSAILYGL
TRKRDYVNILPDLRGLGDVIFKLFRSGVPQTQNYCLQAFCNMAHNKYFAA
SIASDPDLMEGFIVGCMVHTNSSYMKEMSSEVLYYLISNPSTRLTALKGQ
GLWALVQLADANGSTVSMRLALLALFNLACDLRENARWLNENTVAAVLDF
DDEVLGAPAFTGLLYLASTHHRRLSQMLISTRMALEARVKIEGAKFLKRD
RALEEDKKFMARTTAALKPGDDEGNDSSSEEENTADRQRSFSKSKYFGYK
QQGRLRRTFVASHLMPTLATVYNLCCKSGKATKLFFRKNIPEAVAGLLEE
MRKAQDETYYHSQVEIMCVAVLTKMIENAALVPKLIERHVTPAITQGLDS
RIVAVRLASLWSLLLLGIPGSGKNDDTATAAPASAGKDHAGSGTQVRMWM
LFCREAVVECKAVSALWILWESTAATLEAGAREHMRYAIATVTRIFFMDK
VAASAAVKQRGAELLALTMDFSADSRAVSPLSLVGGDDSDFDESSSPLVK
VTALCCAVVTVHLPDMPAKAVQSVCEGCLDVFLKVLPTEEHEVRDLCSLA
MRCLSGNEELLLDLLSDPSRFTTVLRVLLEEATPVGGMHIEAVLKRVVVL
SAVPGVADLSPALLNLTDYVFQRRAGGPSRAPTKLTFSAAPPEVGGRAAS
GWAASQSTNGSVSSTRGAGVRGSKAAMNSGTGGVDRQVTRTVPGGRQHQA
SLAASGSGGSVASIRAHRMTRLKATRTGGAITSNGQGPKTTSEGRSNDIV
KAPGGSEQDKAASAGPNALDPADAAAGVDVAGSADFTGNAIAIAGNLNSK
FNVFQDIVAETPGAYHTVPHLSSHCDENNFNTEHENDDDYDTDQDEGVRS
VPGAADFAGKVDVLARIRPSVTKAVPRVSSRRLPSCSRVTAAQPPTKATS
VGKHESVAGWGLGPSTSCDANTGGHAEHGDTRGQGPRQREQRSMLERLND
HDHDYLLSDSSQTSDDEEDLEITYNDDEIRQVKRLVFRVVEADMSTTVVE
SVIEVVTQLREVARRQCTSFQHKSEEFRKRVLSTRKGEALPLPHSNRTCG
NAATASASSRETSRESTPCTSCPPLPRTAERPTATPRDTSNSNNNWDPAK
QLLLLMGMQPLPMASGWEFDSSQSLKGRGAPKKVNLCTTKFVEECKTLTP
TTVAVPIPLPEDLVHFAQKGDAEMPSGLERCILPPLERPAANVAAPEPSE
LDEPSVRTTVAADAAAAAAAAAAAAAATPSEHPGLEEMHGDVHGAVAAAS
DDVTPSSFKNAASRLVRRLSGEVVKRAGRGNSKHTRHTKHIDNKNRRRSV
KGGREPVAEAEGSGAAARARNFSKGDQGSGGAGAAPNTLEWGVGTASSME
EQRRSLFSPGGVQRTGNKERGETTVGSWNTIAEASGASPTRSLDEMFVES
PLLAALSVVETCRAETTGLAADIGGTGGGGGRRGKPSNRSAVPALAADIV
SMRTQRSAEQREADRERQRLLRSLGVGTRRTLRAGPGKWRGLRVATNVVD
PRARAPLSPPFSLATVASPVQL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold