mRNA_Ecto-sp13_S_contig109.802.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig109.802.1 vs. uniprot
Match: D8LU71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU71_ECTSI) HSP 1 Score: 1502 bits (3888), Expect = 0.000e+0 Identity = 800/843 (94.90%), Postives = 815/843 (96.68%), Query Frame = 1
Query: 283 DEAAADDIEERPGMMASSTNSVASEALDEFNYGNEASADDEVFQRQMKATAKACLRSLHAILKHKWVRLDPLLEGIKEDLLRMLVSCS-----ALSPSLIVLRHVSGVLGNLSRVIVASSSDEGGPPRWKSRITVFDALKRLAYVDDQRLAFRTSAILYGLTRKRDYVNILPDLRGLGDVIFKLFRSGVPQTQNYCLQAFCNMAHNKYFAASIASDPDLMEGFIVGCMVHTNSSYMKEMSSEVLYYLISNPSTRLTALKGQGLWALVQLADANGSTVSMRLALLALFNLACDLRENARWLNENTVAAVLDFDDEVLGAPAFTGLLYLASTHHRRLSQMLISTRMALEARVKIEGAKFLKRDRALEEDKKFMARTTAALKPGDDEGNDSSSEEENTADRQRSFSKSKYFGYKQQGRLRRTFVASHLMPTLATVYNLCCKSGKATKLFFRKNIPEAVAGLLEEMRKAQDETYYHSQVEIMCVAVLTKMIENAALVPKLIERHVTPAITQGLDSRIVAVRLASLWSLLLLGIPGSGKNDDTATAAPASAGKDHAGSGTQVRMWMLFCREAVVECKAVSALWILWESTAATLEAGAREHMRYAIATVTRIFFMDKVAASAAVKQRGAELLALTMDFSADSRAVSPLSLVGGDDSDFDESSSPLVKVTALCCAVVTVHLPDMPAKAVQSVCEGCLDVFLKVLPTEEHEVRDLCSLAMRCLSGNEELLLDLLSDPSRFTTVLRVLLEEATPVGGMHIEAVLKRVVVLSAVPGVADLSPALLNLTDYVFQRRAGGPSRAPTKLTFSAAPPEVGGRAASGWAASQSTNGSVSSTRGAGVRGSKAAMNSGTG 2796
+EAAADDIEERP MMAS T+SVASE LDEFNYGNEA+ADDEVFQRQM+ATAKACLRSLHAILKHKWVRLDPLLEG+KEDLLRMLVSCS ALSP L+VLRHVSGVLGNLSRVIVASSSDEGGPPRWKSRIT+FDALKRLA VDDQRLAFRTSAILYGLTRKRDYVNILPDLRGLGDVIFKLFRSGVPQTQNYCLQAFCNMAHNK FAASIASDPDLMEGFIVGCMVHTNSSYMKEMSSEVLYYLISNPSTRLTALKGQGLWALVQLADANGSTVSMRLALLALFNLACDLRENARWLNENTVAAVLDFDDEVLGAPAFTGLLYLASTHHRRLSQMLISTRMALEARVKIEGAKFLKRDRALEEDKKFMARTTAALKPGDDEGNDSSSEEEN DRQRSFSKSKYFGYKQQGRLRRTFVASHLMPTLATVYNLCCKSGKATKLFFRKNIPEAV GLLEEMRKAQDETYYH QVEIMCVAVL+ MIENAALVPKLIERHVTPAITQGLDSRIVAVRLASLWSLLLLGIPGSG NDDT TAAPASAGKDHAG GTQVRMWMLFCREAVVECKAVSALW LWESTAATLEAGAREHMRYAI+TVTRIFFMDKVAASAAVKQRGAELLALTMDFSADSRAVS LSLVG DDSD+DE+SS LVKV+ALCCAVVTVHLPDMPAKAVQSVCEGCLDVFLKVLPTEEHEVRDLCSLAMRCLSGNEELLLDLLSDP RFTTVL+VLLEEAT VGGMHIEAVLKRVVVLSAVPGVADLSPALLNLTDYVFQRRAGG SRAPTKLTFSAAPP+VGGRAASG AASQSTNGSVSSTRGAGVRGSKAAMNS +G
Sbjct: 20 EEAAADDIEERPDMMASFTDSVASEVLDEFNYGNEATADDEVFQRQMRATAKACLRSLHAILKHKWVRLDPLLEGMKEDLLRMLVSCSVAGTQALSPRLVVLRHVSGVLGNLSRVIVASSSDEGGPPRWKSRITLFDALKRLACVDDQRLAFRTSAILYGLTRKRDYVNILPDLRGLGDVIFKLFRSGVPQTQNYCLQAFCNMAHNKDFAASIASDPDLMEGFIVGCMVHTNSSYMKEMSSEVLYYLISNPSTRLTALKGQGLWALVQLADANGSTVSMRLALLALFNLACDLRENARWLNENTVAAVLDFDDEVLGAPAFTGLLYLASTHHRRLSQMLISTRMALEARVKIEGAKFLKRDRALEEDKKFMARTTAALKPGDDEGNDSSSEEENATDRQRSFSKSKYFGYKQQGRLRRTFVASHLMPTLATVYNLCCKSGKATKLFFRKNIPEAVTGLLEEMRKAQDETYYHPQVEIMCVAVLSTMIENAALVPKLIERHVTPAITQGLDSRIVAVRLASLWSLLLLGIPGSGNNDDTTTAAPASAGKDHAGGGTQVRMWMLFCREAVVECKAVSALWTLWESTAATLEAGAREHMRYAISTVTRIFFMDKVAASAAVKQRGAELLALTMDFSADSRAVSALSLVGEDDSDYDETSSALVKVSALCCAVVTVHLPDMPAKAVQSVCEGCLDVFLKVLPTEEHEVRDLCSLAMRCLSGNEELLLDLLSDP-RFTTVLKVLLEEATSVGGMHIEAVLKRVVVLSAVPGVADLSPALLNLTDYVFQRRAGGSSRAPTKLTFSAAPPKVGGRAASGRAASQSTNGSVSSTRGAGVRGSKAAMNSVSG 861 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig109.802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig109.802.1 >prot_Ecto-sp13_S_contig109.802.1 ID=prot_Ecto-sp13_S_contig109.802.1|Name=mRNA_Ecto-sp13_S_contig109.802.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1773bp RECATGALCNLARKPWITVEICKETKMMQTLLTSIGVALAHGEEGTSTLAback to top mRNA from alignment at Ecto-sp13_S_contig109:16802..38463- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig109.802.1 ID=mRNA_Ecto-sp13_S_contig109.802.1|Name=mRNA_Ecto-sp13_S_contig109.802.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=21662bp|location=Sequence derived from alignment at Ecto-sp13_S_contig109:16802..38463- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig109:16802..38463- >mRNA_Ecto-sp13_S_contig109.802.1 ID=mRNA_Ecto-sp13_S_contig109.802.1|Name=mRNA_Ecto-sp13_S_contig109.802.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=5319bp|location=Sequence derived from alignment at Ecto-sp13_S_contig109:16802..38463- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |