prot_Ecto-sp13_S_contig1082.735.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1082.735.1
Unique Nameprot_Ecto-sp13_S_contig1082.735.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length142
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1082.735.1 vs. uniprot
Match: D7FPX7_ECTSI (Dynein light chain flagellar outer dynein arm light chain LC1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPX7_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 2.310e-66
Identity = 108/132 (81.82%), Postives = 108/132 (81.82%), Query Frame = 0 
Query:    3 TTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQLSLSTNCIDRIIPLAGMXXXXXXXXXXXXXXKIEKLDDVAESLEELWISYNQVTTLDGXXXXXXXXXXYMSNNSVKSWAELDKL 134
            TTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQLSLSTNCIDRIIPLAGM              KIEKLDDVAESLEELWISYNQVTTLDG          YMSNNSVKSWAELDKL
Sbjct:    2 TTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQLSLSTNCIDRIIPLAGMKKLKILSLGRNCIKKIEKLDDVAESLEELWISYNQVTTLDGLSNLSNLTRLYMSNNSVKSWAELDKL 133
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BLAST of mRNA_Ecto-sp13_S_contig1082.735.1 vs. uniprot
Match: A0A835Z550_9STRA (Dynein light chain flagellar outer dynein arm light chain LC1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z550_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.270e-54
Identity = 87/132 (65.91%), Postives = 103/132 (78.03%), Query Frame = 0 
Query:    3 TTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQLSLSTNCIDRIIPLAGMXXXXXXXXXXXXXXKIEKLDDVAESLEELWISYNQVTTLDGXXXXXXXXXXYMSNNSVKSWAELDKL 134
            TTC+QAIK WEAKNEA AEEA VVKLYCQ+PPIAKLDNSLN+LKNCE LSLSTN IDR+IPLAGM              +IEKL+DVA++LEELW+SYNQ+T+L+G          Y+SNN++KSWAELD+L
Sbjct:    2 TTCAQAIKTWEAKNEAVAEEAPVVKLYCQLPPIAKLDNSLNTLKNCEHLSLSTNSIDRLIPLAGMKRLRILSLGRNVLKRIEKLEDVADTLEELWLSYNQITSLEGLGALASLTTLYVSNNNIKSWAELDRL 133
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BLAST of mRNA_Ecto-sp13_S_contig1082.735.1 vs. uniprot
Match: A0A812XNK2_SYMMI (LC1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XNK2_SYMMI)

HSP 1 Score: 169 bits (427), Expect = 1.030e-50
Identity = 81/133 (60.90%), Postives = 99/133 (74.44%), Query Frame = 0 
Query:    2 QTTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQLSLSTNCIDRIIPLAGMXXXXXXXXXXXXXXKIEKLDDVAESLEELWISYNQVTTLDGXXXXXXXXXXYMSNNSVKSWAELDKL 134
            QTTC+QA+KNWEA N  +AEEA  +KLYCQ+PPI K+D+SLN+L+NCE+L+LSTN IDRIIPLAGM              KIEKLDDVA +LEELW+SYNQ+ +LDG          Y+SNN +K+WAELDKL
Sbjct:    2 QTTCAQALKNWEAANGTAAEEADYIKLYCQVPPIVKMDSSLNALRNCERLALSTNAIDRIIPLAGMSSLKILSLGRNQIKKIEKLDDVASTLEELWVSYNQINSLDGVNVLTNLAVLYISNNLIKNWAELDKL 134
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BLAST of mRNA_Ecto-sp13_S_contig1082.735.1 vs. uniprot
Match: B8C6D5_THAPS (Leucine-rich repeat protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6D5_THAPS)

HSP 1 Score: 138 bits (348), Expect = 1.070e-38
Identity = 76/140 (54.29%), Postives = 94/140 (67.14%), Query Frame = 0 
Query:    3 TTCSQAIKNWEA--KNEASAEEATVVKLYCQMPPIAKLDNS-LNSLKNCEQLSLSTNCIDRIIPLAGMXXXXXXXXXXXXXXKIEKLDDVAESLEELWISYNQVTTLDGXXXXXXXXXXYMSNNSVKSWAELDKLVSKDR 139
            TTC+QAIKNWEA  KNE S EEAT V L  Q PPI KLD   LN+LK C++LSLSTN I+R+I L GM              KIEKL+DVA SL++LWISYNQ+++LDG          Y SNN +KS++ELDKL + ++
Sbjct:    2 TTCAQAIKNWEANPKNEGSVEEATEVSLCFQAPPITKLDAKVLNNLKKCQKLSLSTNMIERMISLTGMSELKILSIGRNNIKKIEKLEDVASSLQQLWISYNQISSLDGLACVTGLTTLYCSNNLIKSFSELDKLKANEQ 141
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BLAST of mRNA_Ecto-sp13_S_contig1082.735.1 vs. uniprot
Match: A0A1V9ZTY7_9STRA (Leucine-rich repeat protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTY7_9STRA)

HSP 1 Score: 134 bits (336), Expect = 9.740e-37
Identity = 67/95 (70.53%), Postives = 75/95 (78.95%), Query Frame = 0 
Query:    3 TTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQLSLSTNCIDRIIPLAGMXXXXXXXXXXXXXXKIEKLDDVAESLEELW 97
            TTCSQAIK WEAK  AS+EEA VVKLYCQ+PPIAKLDNSLN+LKNCE LSLSTN IDR+IPL+GM              KIEKLDDV+++LEELW
Sbjct:   22 TTCSQAIKAWEAKENASSEEAPVVKLYCQIPPIAKLDNSLNTLKNCEHLSLSTNSIDRLIPLSGMKKLRILSLGRNQIKKIEKLDDVSDTLEELW 116
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1082.735.1 vs. uniprot
Match: A0A485L9X2_9STRA (Aste57867_18235 protein n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485L9X2_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.270e-35
Identity = 64/92 (69.57%), Postives = 74/92 (80.43%), Query Frame = 0 
Query:    3 TTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQLSLSTNCIDRIIPLAGMXXXXXXXXXXXXXXKIEKLDDVAESLE 94
            TTCSQAIK WEAK  AS+EEA+V+KLYCQ+PPIAKLDNSLN+LKNCE LSLSTNCIDR+IPL+GM              KIEKLDDV+++LE
Sbjct:    2 TTCSQAIKAWEAKENASSEEASVIKLYCQIPPIAKLDNSLNTLKNCEHLSLSTNCIDRLIPLSGMKKLRILSLGRNQIKKIEKLDDVSDTLE 93
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1082.735.1 vs. uniprot
Match: A0A7S3K2Z4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2Z4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.550e-35
Identity = 69/133 (51.88%), Postives = 92/133 (69.17%), Query Frame = 0 
Query:    3 TTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQLSLSTNCIDRI-IPLAGMXXXXXXXXXXXXXXKIEKLDDVAESLEELWISYNQVTTLDGXXXXXXXXXXYMSNNSVKSWAELDKL 134
            TTC+ AIK++E K+  +A EA +VKLY Q+PPI KLD SLN+L  CE L LSTN ID+I I L G+              KIE+LDD+AE+LEELWISYNQ+++LDG          ++SNN++K++AEL+KL
Sbjct:    3 TTCAAAIKSFEQKSGENAAEAKIVKLYGQIPPITKLDASLNNLTACEHLQLSTNSIDKISIALTGLKNLKILSLGRNVIKKIERLDDLAENLEELWISYNQISSLDGLSSLTNLTTLFISNNAIKNFAELEKL 135
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1082.735.1 vs. uniprot
Match: F0Y145_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y145_AURAN)

HSP 1 Score: 127 bits (318), Expect = 3.730e-34
Identity = 68/137 (49.64%), Postives = 91/137 (66.42%), Query Frame = 0 
Query:    3 TTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQ----LSLSTNCIDRI-IPLAGMXXXXXXXXXXXXXXKIEKLDDVAESLEELWISYNQVTTLDGXXXXXXXXXXYMSNNSVKSWAELDKL 134
            TTC+ AIK +E K   +A +A +VKLYCQ+PPIAKLD+SLN+L  CE+    L LSTN ID+I +   G+              KIEKLDD+ +SLEELWISYNQ++ L+G          YMSNN++K++AEL+K+
Sbjct:    2 TTCAAAIKKFEEKTGETASDAKIVKLYCQIPPIAKLDSSLNNLAACERAAAHLQLSTNNIDKIGLAFTGLKNLKILSLGRNVIKKIEKLDDLGDSLEELWISYNQISALEGLHAMTKLTTLYMSNNNLKNFAELEKI 138
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1082.735.1 vs. uniprot
Match: A0A2D4CDP6_PYTIN (Dynein light chain 1, axonemal n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CDP6_PYTIN)

HSP 1 Score: 126 bits (317), Expect = 4.120e-34
Identity = 63/91 (69.23%), Postives = 72/91 (79.12%), Query Frame = 0 
Query:    3 TTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQLSLSTNCIDRIIPLAGMXXXXXXXXXXXXXXKIEKLDDVAESL 93
            TTC+QAIK WEAKN  SAEEAT++KLYCQ+PPI KLDNSLN+LKNCEQLSLSTN IDR+IPL+GM              KIEKLDDVA++L
Sbjct:    2 TTCAQAIKAWEAKNGTSAEEATIIKLYCQIPPINKLDNSLNTLKNCEQLSLSTNSIDRLIPLSGMKKLRILSLGRNQIKKIEKLDDVADTL 92
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1082.735.1 vs. uniprot
Match: A0A3R6ZXJ2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZXJ2_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.970e-33
Identity = 64/91 (70.33%), Postives = 72/91 (79.12%), Query Frame = 0 
Query:    3 TTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQLSLSTNCIDRIIPLAGMXXXXXXXXXXXXXXKIEKLDDVAESL 93
            TTCSQAIK WEAK  AS+EEA V+KLYCQ+PPIAKLDNSLN+LKNCE LSLSTNCIDR+IPL+GM              KIEKLDDV++SL
Sbjct:  172 TTCSQAIKAWEAKENASSEEAAVIKLYCQIPPIAKLDNSLNTLKNCEHLSLSTNCIDRLIPLSGMKKLRILSLGRNQIKKIEKLDDVSDSL 262
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1082.735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPX7_ECTSI2.310e-6681.82Dynein light chain flagellar outer dynein arm ligh... [more]
A0A835Z550_9STRA2.270e-5465.91Dynein light chain flagellar outer dynein arm ligh... [more]
A0A812XNK2_SYMMI1.030e-5060.90LC1 protein n=1 Tax=Symbiodinium microadriaticum T... [more]
B8C6D5_THAPS1.070e-3854.29Leucine-rich repeat protein n=1 Tax=Thalassiosira ... [more]
A0A1V9ZTY7_9STRA9.740e-3770.53Leucine-rich repeat protein n=1 Tax=Achlya hypogyn... [more]
A0A485L9X2_9STRA1.270e-3569.57Aste57867_18235 protein n=10 Tax=Saprolegniaceae T... [more]
A0A7S3K2Z4_9STRA1.550e-3551.88Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0Y145_AURAN3.730e-3449.64Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A2D4CDP6_PYTIN4.120e-3469.23Dynein light chain 1, axonemal n=2 Tax=Pythium Tax... [more]
A0A3R6ZXJ2_9STRA1.970e-3370.33Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 112..133
e-value: 0.59
score: 19.2
coord: 90..111
e-value: 15.0
score: 14.1
coord: 67..88
e-value: 0.21
score: 20.7
coord: 45..66
e-value: 250.0
score: 4.2
NoneNo IPR availablePANTHERPTHR15454NISCHARIN RELATEDcoord: 2..134
NoneNo IPR availablePANTHERPTHR15454:SF33DYNEIN LIGHT CHAIN 1, AXONEMALcoord: 2..134
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 26..131
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..139
e-value: 7.2E-36
score: 124.9
IPR025875Leucine rich repeat 4PFAMPF12799LRR_4coord: 92..127
e-value: 2.4E-8
score: 34.1
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 114..135
score: 7.581
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 69..90
score: 7.912
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 47..68
score: 6.511
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 92..113
score: 8.567

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1082contigEcto-sp13_S_contig1082:482..2137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1082.735.1mRNA_Ecto-sp13_S_contig1082.735.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1082 482..2137 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1082.735.1 ID=prot_Ecto-sp13_S_contig1082.735.1|Name=mRNA_Ecto-sp13_S_contig1082.735.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=142bp
KQTTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQ
LSLSTNCIDRIIPLAGMKNLKILSLGRNCIKKIEKLDDVAESLEELWISY
NQVTTLDGLSNLSNLTRLYMSNNSVKSWAELDKLVSKDRTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR025875Leu-rich_rpt_4
IPR001611Leu-rich_rpt