prot_Ecto-sp13_S_contig100479.73.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig100479.73.1
Unique Nameprot_Ecto-sp13_S_contig100479.73.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length43
Homology
BLAST of mRNA_Ecto-sp13_S_contig100479.73.1 vs. uniprot
Match: D7G4U4_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U4_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 9.040e-21
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 QGDKEATRGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVTIFS 43
            QGDKEA RGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVTIFS
Sbjct:  681 QGDKEAARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVTIFS 723          
BLAST of mRNA_Ecto-sp13_S_contig100479.73.1 vs. uniprot
Match: A0A835Z5P1_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P1_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.840e-13
Identity = 32/43 (74.42%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 QGDKEATRGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVTIFS 43
            QGD E  +GL +SPLCDR   NL KSQCDFIDFIVRPCVT+FS
Sbjct: 1759 QGDLERGQGLQISPLCDRAQGNLAKSQCDFIDFIVRPCVTMFS 1801          
BLAST of mRNA_Ecto-sp13_S_contig100479.73.1 vs. uniprot
Match: D8LTM6_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM6_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.470e-11
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    1 QGDKEATRGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVTIFS 43
            QGD EA +G+ VSPLC R   N  KSQCDF++F+VRPC T+FS
Sbjct:  557 QGDLEAEKGVPVSPLCSREGHNQAKSQCDFVNFVVRPCATVFS 599          
BLAST of mRNA_Ecto-sp13_S_contig100479.73.1 vs. uniprot
Match: A0A7S1CCP6_9STRA (Phosphodiesterase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCP6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.330e-10
Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    1 QGDKEATRGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVTIFS 43
            QGD E  RG+ +SPLCDRR+ NL KSQ  FIDF+VRP   +FS
Sbjct:  695 QGDLERQRGMEISPLCDRRNHNLSKSQLGFIDFVVRPAFALFS 737          
BLAST of mRNA_Ecto-sp13_S_contig100479.73.1 vs. uniprot
Match: A0A7S3XSN1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSN1_HETAK)

HSP 1 Score: 60.8 bits (146), Expect = 6.990e-10
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    1 QGDKEATRGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVTIFS 43
            QG +EA  GL VSPLCD+   ++PKSQC+FIDF+VRPC   F+
Sbjct:   76 QGAREARAGLPVSPLCDQAKVDIPKSQCNFIDFLVRPCFEPFA 118          
BLAST of mRNA_Ecto-sp13_S_contig100479.73.1 vs. uniprot
Match: A0A7S3XSI7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSI7_HETAK)

HSP 1 Score: 61.2 bits (147), Expect = 8.160e-10
Identity = 27/44 (61.36%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    1 QGDKEATRGLAVSPLCDRR-DQNLPKSQCDFIDFIVRPCVTIFS 43
            QGD E  RG+ +SPLCDR    N  KSQCDF+DF+VRPC+  FS
Sbjct:  280 QGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLVPFS 323          
BLAST of mRNA_Ecto-sp13_S_contig100479.73.1 vs. uniprot
Match: A0A7S1C309_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C309_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.400e-8
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    1 QGDKEATRGLAVSPLCDRRDQNLPKSQCDFIDFIVRP 37
            QGD+E   GLAVSPLCDR D NLPK+Q  FIDF+V P
Sbjct:  265 QGDRERELGLAVSPLCDRGDVNLPKAQLGFIDFVVLP 301          
BLAST of mRNA_Ecto-sp13_S_contig100479.73.1 vs. uniprot
Match: A0A7S1C4N6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4N6_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 3.630e-8
Identity = 26/43 (60.47%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 QGDKEATRGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVTIFS 43
            QGDKE   GL +SPLCDR + +L KSQ  FI+F+VRPC   FS
Sbjct:  836 QGDKERVLGLPISPLCDRDNFDLAKSQQGFIEFVVRPCFEPFS 878          
BLAST of mRNA_Ecto-sp13_S_contig100479.73.1 vs. uniprot
Match: A0A7S3XXI8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXI8_HETAK)

HSP 1 Score: 55.8 bits (133), Expect = 6.480e-8
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 QGDKEATRGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVTIFS 43
            QG +E   GL +S LCDR    LPKSQCDFI+F+V+PC+  FS
Sbjct:  151 QGAREKEEGLPISFLCDRATVVLPKSQCDFINFLVKPCLGPFS 193          
BLAST of mRNA_Ecto-sp13_S_contig100479.73.1 vs. uniprot
Match: E9GVS7_DAPPU (PDEase domain-containing protein (Fragment) n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9GVS7_DAPPU)

HSP 1 Score: 50.4 bits (119), Expect = 1.150e-6
Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    1 QGDKEATRGLAVSPLCDRRDQNLPKSQCDFIDFIVRP 37
            QGD+E  +GL VSP+CDR++  + KSQ  FID+IV P
Sbjct:   35 QGDREREQGLDVSPMCDRQNATIEKSQVGFIDYIVHP 71          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig100479.73.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4U4_ECTSI9.040e-2197.67Phosphodiesterase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835Z5P1_9STRA1.840e-1374.42Phosphodiesterase n=1 Tax=Tribonema minus TaxID=30... [more]
D8LTM6_ECTSI1.470e-1162.79Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A7S1CCP6_9STRA3.330e-1062.79Phosphodiesterase n=1 Tax=Bicosoecida sp. CB-2014 ... [more]
A0A7S3XSN1_HETAK6.990e-1060.47Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XSI7_HETAK8.160e-1061.36Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1C309_9STRA1.400e-870.27Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S1C4N6_9STRA3.630e-860.47Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S3XXI8_HETAK6.480e-858.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
E9GVS7_DAPPU1.150e-656.76PDEase domain-containing protein (Fragment) n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0369713'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamilyGENE3D1.10.1300.10coord: 1..43
e-value: 1.4E-13
score: 52.7
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainPFAMPF00233PDEase_Icoord: 1..42
e-value: 9.9E-11
score: 41.8
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainPROSITEPS51845PDEASE_I_2coord: 1..43
score: 16.953
NoneNo IPR availablePANTHERPTHR11347:SF82HIGH AFFINITY CAMP-SPECIFIC AND IBMX-INSENSITIVE 3',5'-CYCLIC PHOSPHODIESTERASE 8coord: 1..39
NoneNo IPR availablePANTHERPTHR11347CYCLIC NUCLEOTIDE PHOSPHODIESTERASEcoord: 1..39
NoneNo IPR availableSUPERFAMILY109604HD-domain/PDEase-likecoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig100479contigEcto-sp13_S_contig100479:171..299 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig100479.73.1mRNA_Ecto-sp13_S_contig100479.73.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig100479 171..299 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig100479.73.1 ID=prot_Ecto-sp13_S_contig100479.73.1|Name=mRNA_Ecto-sp13_S_contig100479.73.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=43bp
QGDKEATRGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVTIFS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036971PDEase_catalytic_dom_sf
IPR002073PDEase_catalytic_dom