Homology
BLAST of mRNA_Ecto-sp13_S_contig10047.71.1 vs. uniprot
Match:
A0A6H5JEB4_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEB4_9PHAE)
HSP 1 Score: 259 bits (661), Expect = 6.610e-84
Identity = 132/152 (86.84%), Postives = 137/152 (90.13%), Query Frame = 1
Query: 1 LQPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQVGA------AGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVRKRVGRCSHVNILL 438
LQPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQV AGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTV + C++V ++
Sbjct: 27 LQPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQVAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRII 178
BLAST of mRNA_Ecto-sp13_S_contig10047.71.1 vs. uniprot
Match:
A0A7S4DH62_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH62_HETAK)
HSP 1 Score: 218 bits (556), Expect = 4.510e-68
Identity = 107/152 (70.39%), Postives = 126/152 (82.89%), Query Frame = 1
Query: 4 QPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQ-------VGAAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVRKRVGRCSHVNILL 438
QPWVEKYRPKTVDD+AHQDEV TLK AI TGVLPHLLFYGPPGTGKTST+LA+A+TLFGP+ YR R+LELNASDERGIKV+REK+K FAQ VG G CPPFK+++LDEADTMTPDAQ+ALRRTME +S V + C++V+ ++
Sbjct: 16 QPWVEKYRPKTVDDIAHQDEVVKTLKNAIDTGVLPHLLFYGPPGTGKTSTILAVAKTLFGPEIYRARVLELNASDERGIKVIREKVKGFAQHAVGRGVVGPNGRRCPPFKIVVLDEADTMTPDAQAALRRTMEVHSKVTRFCLVCNYVSRII 167
BLAST of mRNA_Ecto-sp13_S_contig10047.71.1 vs. uniprot
Match:
A0A836CA10_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA10_9STRA)
HSP 1 Score: 216 bits (551), Expect = 2.780e-67
Identity = 109/151 (72.19%), Postives = 127/151 (84.11%), Query Frame = 1
Query: 7 PWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQ--VGAAG-----YPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVRKRVGRCSHVNILL 438
PWVEKYRP+TVDD+A+QDEV TLK AI+TGV+PHLLFYGPPGTGKTST+LA+ARTLFGP+ YR RILELNASDERGIKVVREK+K FAQ VG A + CPPFK+IILDEADTMTPDAQ+ALRRTMETY+ V + C++V ++
Sbjct: 22 PWVEKYRPRTVDDIAYQDEVVKTLKKAISTGVMPHLLFYGPPGTGKTSTILAVARTLFGPEMYRTRILELNASDERGIKVVREKVKNFAQAAVGTANATSTTHSCPPFKLIILDEADTMTPDAQAALRRTMETYTKVTRFCLICNYVTRII 172
BLAST of mRNA_Ecto-sp13_S_contig10047.71.1 vs. uniprot
Match:
W7TMJ2_9STRA (Dna replication factor c subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMJ2_9STRA)
HSP 1 Score: 212 bits (539), Expect = 1.060e-66
Identity = 106/152 (69.74%), Postives = 125/152 (82.24%), Query Frame = 1
Query: 1 LQPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQVGA------AGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVRKRVGRCSHVNILL 438
+QPWVEKYRP+ VDD+++QDEV TLK AI TG LPHLLFYGPPGTGKTST+LA+AR+LFGP+ YR RILELNASDERGIKVVREK+K FAQ AGYPCPPFK+IILDEADTMT +AQ+ALRRTMETYS + + C++V ++
Sbjct: 23 VQPWVEKYRPQGVDDISYQDEVVKTLKNAIQTGTLPHLLFYGPPGTGKTSTILAVARSLFGPE-YRSRILELNASDERGIKVVREKVKQFAQFTVTGLEKTAGYPCPPFKIIILDEADTMTTEAQAALRRTMETYSKITRFCLVCNYVTRII 173
BLAST of mRNA_Ecto-sp13_S_contig10047.71.1 vs. uniprot
Match:
A0A4D9CQY7_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQY7_9STRA)
HSP 1 Score: 212 bits (539), Expect = 2.500e-65
Identity = 106/152 (69.74%), Postives = 125/152 (82.24%), Query Frame = 1
Query: 1 LQPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQVGA------AGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVRKRVGRCSHVNILL 438
+QPWVEKYRP+ VDD+++QDEV TLK AI TG LPHLLFYGPPGTGKTST+LA+AR+LFGP+ YR RILELNASDERGIKVVREK+K FAQ AGYPCPPFK+IILDEADTMT +AQ+ALRRTMETYS + + C++V ++
Sbjct: 23 VQPWVEKYRPQGVDDISYQDEVVKTLKNAIQTGTLPHLLFYGPPGTGKTSTILAVARSLFGPE-YRSRILELNASDERGIKVVREKVKQFAQFTVTGLEKTAGYPCPPFKIIILDEADTMTTEAQAALRRTMETYSKITRFCLVCNYVTRII 173
BLAST of mRNA_Ecto-sp13_S_contig10047.71.1 vs. uniprot
Match:
A0A812Q4H1_SYMMI (RFC2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Q4H1_SYMMI)
HSP 1 Score: 207 bits (527), Expect = 3.140e-64
Identity = 105/149 (70.47%), Postives = 123/149 (82.55%), Query Frame = 1
Query: 7 PWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQ--VGA---AGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVRKRVGRCSHVNILL 438
PWVEKYRP+ V+D++HQDEVT+TLK AIA G +PHL+FYGPPGTGKT+T LALAR L+GP+ YR R LELNASDERGIKVVREKIKTFAQ VG +GYPCP FK+IILDEADTMTP+AQSALRR ME YS V + C++V ++
Sbjct: 11 PWVEKYRPERVEDISHQDEVTSTLKSAIAQGSIPHLMFYGPPGTGKTTTALALARELYGPELYRARTLELNASDERGIKVVREKIKTFAQGAVGQQKHSGYPCPRFKLIILDEADTMTPEAQSALRRIMEAYSKVTRFCLICNYVTRII 159
BLAST of mRNA_Ecto-sp13_S_contig10047.71.1 vs. uniprot
Match:
A0A7S3GY06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GY06_9STRA)
HSP 1 Score: 202 bits (514), Expect = 2.290e-63
Identity = 101/145 (69.66%), Postives = 116/145 (80.00%), Query Frame = 1
Query: 7 PWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQ--VGAA---GYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVRKRVGRCSHV 426
PWVEKYRP VDDVAHQDEV TLK +I G LPHL+F+GPPGTGKT+T+LA+AR L+GPD Y+ R+LELNASDERGI VVREKIKTFAQ VG GYPCP FK+I+LDE DTMTPDAQSALRR +E YS V + C++V
Sbjct: 25 PWVEKYRPAKVDDVAHQDEVVQTLKKSIELGTLPHLMFHGPPGTGKTTTILAVARALYGPDLYKSRVLELNASDERGISVVREKIKTFAQGAVGGQKTPGYPCPRFKIIVLDEVDTMTPDAQSALRRIIEAYSKVTRFCLVCNYV 169
BLAST of mRNA_Ecto-sp13_S_contig10047.71.1 vs. uniprot
Match:
E1Z5E8_CHLVA (AAA domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z5E8_CHLVA)
HSP 1 Score: 199 bits (506), Expect = 3.020e-61
Identity = 98/149 (65.77%), Postives = 122/149 (81.88%), Query Frame = 1
Query: 4 QPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQ----VGAAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVRKRVGRCSHVNILL 438
QPWVEKYRP+++ +VAHQ+EV TL+ A+++G LPHLLFYGPPGTGKT++ LA+ R LFGP+ + R+LELNASDERGI VVR+KIK FA G AGYPCPPFKVIILDEAD+MT DAQ+ALRRTMETYS V + V C++V+ ++
Sbjct: 4 QPWVEKYRPRSIGEVAHQEEVVQTLQHALSSGNLPHLLFYGPPGTGKTTSALAIVRQLFGPELCKARVLELNASDERGIGVVRDKIKNFAANSVGQGVAGYPCPPFKVIILDEADSMTGDAQNALRRTMETYSRVTRFVFICNYVSRII 152
BLAST of mRNA_Ecto-sp13_S_contig10047.71.1 vs. uniprot
Match:
D8SR37_SELML (AAA domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SR37_SELML)
HSP 1 Score: 201 bits (510), Expect = 3.280e-61
Identity = 102/148 (68.92%), Postives = 115/148 (77.70%), Query Frame = 1
Query: 4 QPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQV----GAAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVRKRVGRCSHVNIL 435
Q WVEKYRPK V DVAHQDEV TL A+ TG LPHLLFYGPPGTGKTST LA+ R LFGP Y+ R+LELNASD+RGI VVR KIK FA V G + YPCPPFKVIILDEAD+MT DAQ+ALRRTMETYS V + C++++ L
Sbjct: 5 QQWVEKYRPKQVKDVAHQDEVVRTLANALETGNLPHLLFYGPPGTGKTSTALAVTRELFGPQLYKTRVLELNASDDRGINVVRTKIKDFAAVAVGRGVSDYPCPPFKVIILDEADSMTEDAQNALRRTMETYSKVTRFCFICNYISRL 152
BLAST of mRNA_Ecto-sp13_S_contig10047.71.1 vs. uniprot
Match:
D2VRF7_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VRF7_NAEGR)
HSP 1 Score: 201 bits (510), Expect = 3.280e-61
Identity = 98/152 (64.47%), Postives = 117/152 (76.97%), Query Frame = 1
Query: 4 QPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQV-------GAAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVRKRVGRCSHVNILL 438
QPW EKYRPKTVDDV HQ+EV + LK ++ G LPHLLFYGPPG GKTST A+A+ LFGP+ Y+ R+LELNASDERGI V+R K+KTFAQ G YPCPPFK+IILDEAD+MT DAQSALRRTMETYS V + C++V+ ++
Sbjct: 7 QPWTEKYRPKTVDDVVHQEEVVSALKKSLEVGNLPHLLFYGPPGNGKTSTATAIAKQLFGPELYKTRVLELNASDERGINVIRTKVKTFAQTAVSENPTGKGKYPCPPFKIIILDEADSMTVDAQSALRRTMETYSNVTRFCLICNYVSRII 158
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10047.71.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 6.61e-84 / Id = 86.84 Expect = 4.51e-68 / Id = 70.39 Expect = 2.78e-67 / Id = 72.19 Expect = 1.06e-66 / Id = 69.74 Expect = 2.50e-65 / Id = 69.74 Expect = 3.14e-64 / Id = 70.47 Expect = 2.29e-63 / Id = 69.66 Expect = 3.02e-61 / Id = 65.77 Expect = 3.28e-61 / Id = 68.92 Expect = 3.28e-61 / Id = 64.47 Sequence A0A6H5JEB4_9PHAE A0A7S4DH62_HETAK A0A836CA10_9STRA W7TMJ2_9STRA A0A4D9CQY7_9STRA A0A812Q4H1_SYMMI A0A7S3GY06_9STRA E1Z5E8_CHLVA D8SR37_SELML D2VRF7_NAEGR Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 0 Seed ortholog score 260.8 Seed ortholog evalue 4e-67 Seed eggNOG ortholog 2880.D8LT29 Preferred name RFC4 Model size 447 KEGG ko ko:K10755,ko:K14015 KEGG Pathway ko03030,ko03420,ko03430,ko04141,map03030,map03420,map03430,map04141 KEGG Module M00289,M00295,M00400,M00403 Hectar predicted targeting category other localisation GOs GO:0000075,GO:0000076,GO:0000166,GO:0000228,GO:0000278,GO:0000723,GO:0000731,GO:0000785,GO:0000790,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005663,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006275,GO:0006281,GO:0006283,GO:0006289,GO:0006296,GO:0006297,GO:0006298,GO:0006301,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007093,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010389,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010948,GO:0010972,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019725,GO:0019899,GO:0019941,GO:0019985,GO:0022402,GO:0022616,GO:0030163,GO:0030894,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031389,GO:0031390,GO:0031391,GO:0031570,GO:0031625,GO:0031974,GO:0031981,GO:0032182,GO:0032200,GO:0032201,GO:0032991,GO:0032993,GO:0033260,GO:0033314,GO:0033554,GO:0033683,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0036094,GO:0042276,GO:0042592,GO:0042623,GO:0042769,GO:0043085,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043599,GO:0043601,GO:0043632,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044774,GO:0044786,GO:0044818,GO:0045786,GO:0045930,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051276,GO:0051338,GO:0051347,GO:0051603,GO:0051606,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0061860,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070914,GO:0070987,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090618,GO:0097159,GO:0098813,GO:0104004,GO:1900262,GO:1900264,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902296,GO:1902319,GO:1902494,GO:1902749,GO:1902750,GO:1902969,GO:1902983,GO:1903047,GO:1903460,GO:1904949,GO:2000112,GO:2000278,GO:2000573 Exons 4 EggNOG free text desc. DNA replication EggNOG OGs COG0470@1,KOG0989@2759 Ec32 ortholog description Replication factor C Ec32 ortholog Ec-08_003900.1 Cds size 447 COG Functional cat. L Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko03032,ko03036,ko03400
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462503.328038-CDS-Ecto-sp13_S_contig10047:14..176 1681462503.328038-CDS-Ecto-sp13_S_contig10047:14..176 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10047 15..176 - 1681462503.351327-CDS-Ecto-sp13_S_contig10047:914..1002 1681462503.351327-CDS-Ecto-sp13_S_contig10047:914..1002 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10047 915..1002 - 1681462503.3632042-CDS-Ecto-sp13_S_contig10047:1302..1436 1681462503.3632042-CDS-Ecto-sp13_S_contig10047:1302..1436 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10047 1303..1436 - 1681462503.3723078-CDS-Ecto-sp13_S_contig10047:3706..3769 1681462503.3723078-CDS-Ecto-sp13_S_contig10047:3706..3769 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10047 3707..3769 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10047.71.1
>prot_Ecto-sp13_S_contig10047.71.1 ID=prot_Ecto-sp13_S_contig10047.71.1|Name=mRNA_Ecto-sp13_S_contig10047.71.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp
LQPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTS back to top mRNA from alignment at Ecto-sp13_S_contig10047:15..3769-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10047.71.1 ID=mRNA_Ecto-sp13_S_contig10047.71.1|Name=mRNA_Ecto-sp13_S_contig10047.71.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3755bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10047:15..3769- (Ectocarpus species13 EcNAP12_S_4_19m)CTGCAGCCGTGGGTGGAAAAGTACAGACCCAAGACGGTGGATGACGTGGC
ACACCAAGACGAG GTGAGATCGTCCTCACCACCTCATAGGCGGGGACGGG
CGTTAGGGAAAGAAGCAGGGACGTAGCAGTGACATATCGAGGTTTAGGTT
TGCGACGACACAGCATGATGTTTTTGAATTTGTTCCCACAGCAGCGCAGA
GCAAAGAGCGCGCGAACACACCTTCCGGGGGTTGCATTGTACTGACTATT
TCTAGGTTTTACATGGATCGATGCGGGAAATAGCAAGCGCTAACAGCTTG
GGTATCATCGTTTTGCCCGCACACAGGGATATGTCTCAGTTCCCCCCCTC
CCTGAACTACATACACACAAAGAGCACATCTGTACGCTACTGCTGCTGCA
GTTTGGTTCAAAATTAAAAAAAACAAAAAAGCGCCGCCCTTCTCTTTCGT
TCCTTGCAGTTTTCGAAAAGGAAAGACGTGAGCTTTGTTACTCCTGTAGA
TACGGTGGCAAACGACGGACCCGATATCTATATCTTTCTTCTGCCTCCCA
CTGCGAGACGGCTGTCAAGGGTATCTATCTTAACCCTCCGAGCATACTGC
TTGTAGGTTAGTTTTAGGGTAGGGGTTTAGAAAAAGAAATCGTGTGCGTT
CAGGGGGAGGCTCAACAGTCCCGAGGGCCAAAGGGCTACTTTTGGCTTCA
GCGTATGGAAAGTGTCCCCAAAATGCACTCGGGACACTTCCTATGCTGAA
GCCCAGCCAGCATATTTTTCCGGAACTAGGCTACTACAGAGTGTACACAG
TTTTACCAACAATGGAACCCGCGGCTTGGGGGATTTGTACAACGGCCAAT
TTCTCAACACCGGTGACCTGCGACAATGGATGAACGTACCTTCCAGTGCT
GCTCATGTCATGCAAATACTTGTCGAATGAATGCCGACGCTTGTTGTTTT
TTCTACTTTTCAGCCTTGTCCTCTGCGGCTGAATCGTTTCGACCTTTTTA
GTAAAAAATGTACATACAAACACAGAAAGATACACTTGCAGCTAAGAGTG
AAGCAATGGGCCCTCAACAACGCCGGTTGAATAACGCCGATGGCCCTGCA
TAGCGCCGATCGAATTGCTGGGCGCAGACTGAATCACAAAGTCAATCTGT
ATTTTGAAAAGCCCAGGTTCCTCTGAAGAGCGTCTGTGGATTCGCCGGGC
ACATACCGACGATTTTGAGGCCCCTCTACTACTTCATAACCAAAGTAGTA
AGGGGATGACTATGACGGAGCGTTGTGCGAGACAGCAGCGTTCATCCCTT
CCACGCCATGAGGCAGGGATCCTTGCGAGGGGTAACCCTCTAGTATTCCA
GTTAGTTACAGGTTAAGGTCCAGACAAAAATCGAAGCTGCTCGTTGGGAG
AGGTTGTACAGCAGTCCCTTAAAGGACGAAGGATGACTTGCTTTTGGACA
GTCAAGCGTCCCCAAATGCATGGTGACACATTCCATACTTAGGCTAGGTC
AGCGATTTTATCAATTCTAGGCTACACAGACTTTACAAACAAGGGGACAC
GCGACTTGGAAGAAATATGCGCACAGAAAGTCAGGGGCCGAGGAGGGGCA
TTGCCCAGAAGAAGCATGGTAGACCAAGGTTTTCGACATGCGTTTCTCAC
AGCGGAGCCTCGTGACGACTACGGTGCGGTGAACAGACTTTCGAGTGCTG
TGTCTCCAACGTGTCCCCATCTGGGCATCCAGCACTAAATCCAAGGAGAA
AGCCTCTATCCATGTGTACCTCGGATGTTTTATGTGAGCAAAACCAACGA
CCAGGAATCAGCATCCTGATGTCCGGGTGCCCGATCAAAAAAGGACCTCA
TTTGTGCGTTCGGGGCTCTTGCTACGGCAAGGTTTGGTTTGCCACACCGG
GAAGATTACTCGTACGGGGTAAGGGTTTCATCGCCAGGCGATTGTTCATC
GTGATTCTTCACTTCCTTCTTAGGCAGGGTTTTCCAGCGGGGTAAGCACA
AGCCTCGACCGCGCAAGGAATGATCTTCGCCCTCTGCTCCGGCATGTTGT
GTTTCGGTCAGTTTTTTTTTTTCTGCCTTTTGTCGGCATGCCTACCTCCT
CTTCCGATATATCTTTGTTGTTAATCTCTTGGTCCTGACATTTCGGATGT
ACTGCGGACTGCGGCATTTTTGTGACCGTGTCGTGCTCTGAGGTATCGCG
ACAAAACTGCCGTGAGAGTTTTCAGCGTGTACCACAACAACAACTTCAGC
AACATTAACAAAGATCATCAACAATCATCGACAACATCGCCACCACCACT
AACAACAACACCAACATCACCAAAAACCACCAGGTGACGAACACCTTGAA
AGGCGCGATCGCCACAGGGGTGCTCCCCCACCTGCTGTTCTACGGGCCCC
CCGGCACGGGGAAAACCTCGACGGTACTGGCGCTGGCGCGGACGCTGTTC
GGGCCCGACACGTACAG GTGAGGCGGGTTGAGGGAAGCGGGGCCTTTTTG
AGTGGCGGGGGAAAGGCGCAACCTCTCTCTCTCACTCGTCACGAATGAGA
GATTTTCTCTCCCTCGCTCGCTTGCTCGCTCTAGTTGTTGTTGTTGTCAA
AACGTTGCCCTGGCTCTGATTTCGTTTTTTTTCCACGAGTGTTGTCGGGA
GGAGATGTGACAGTACATGATAGCTCAAGAGTGGGATTGATCTTCGGGCC
TACGTACGCGTGCGTTTCGGCCCCCATCGTACTCGGTTTATTTTGGTCTC
GTTGCGACACTTGGCAGGGACCGAATCCTGGAACTCAATGCGTCGGACGA
GCGAGGGATCAAGGTTGTCCGCGAAAAGATCAAGACTTTCGCACAGGTAG
GCGCT GTTTTGCGAGAGACAGGGCGATAGAGGGACAGAGAAAAGGGGACA
GAAAGCTAGTTAGATAGGGCGGCTGACACGTGCAGATACAGCGAGAGAGA
GAGAAAGAGACAGAGAATGCGACAAACGGATGCCAGACAGACAGACAGAC
AGACAAGCAGGCAGGGAGACGAACACACACGAGAGAAAGAGGGAGAGGCG
TGCAGAGAGAAAGACAGAGAACATCCTCGGGTAGCACCCCTGGAGTAGCT
GGCACGATGGTGTGTGGGCACAAAGCATGGGTTCAAACTCGTGGCGACAG
TCCTTGAAGCCATCCAGTCCAGGCCACCTAAACTCAGTACATGTAGCGCG
CACCGATACAAGACGCGCCCCCCTGTCACTTTCGTTCTGCAATCGGTGGT
CTGAACTGTGGCTAAGGGCAGCGACACAAAATGAACGTGTGGCGGATGGG
GGTGGTGGTGACCGGTTGTGACTCATTGGGGCGGGCGATTGGCGGCGATG
GCACTTTCTCGGTCGTGCTGCGCCTTGCTTCTCTGCGCCGCCGTGCATAA
GCTGACGTGTTACCAAAGCGAAAACAGATTGAACTTAACAGGGCGTCTGT
CCGGTGTGCGAATGTCGTCTGTTTCGCGACCTTGACGATGCAACGTGCTG
ATCCGCGTTGGATTCATATGATGTGATTGACGCCAGTTGTGCTGTGCGTT
TGTGTTTTGATTGAAGGTGGCGGTCGGGAGAGCGACGCACCAGGCGGGGT
ACCCTTGCCCACCGTTCAAGGTGATCATCTTGGACGAGGCGGACACGATG
ACGCCGGACGCGCAGTCGGCGCTCCGGCGTACGATGGAAACCTACTCCAC
GGTGAGAAAGCGGGTGGGGCGGTGTTCTCATGTAAACATACTGCTTAGTC
GTTAG back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10047:15..3769-
>mRNA_Ecto-sp13_S_contig10047.71.1 ID=mRNA_Ecto-sp13_S_contig10047.71.1|Name=mRNA_Ecto-sp13_S_contig10047.71.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=447bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10047:15..3769- (Ectocarpus species13 EcNAP12_S_4_19m) back to top