prot_Ecto-sp13_S_contig10046.69.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10046.69.1
Unique Nameprot_Ecto-sp13_S_contig10046.69.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length207
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10046.69.1 vs. uniprot
Match: A0A6H5KFU5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU5_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.320e-17
Identity = 74/84 (88.10%), Postives = 75/84 (89.29%), Query Frame = 0 
Query:   88 CLLSGARLCGRTSECDDGNGXXXXXXXXXXXXXXXXXXXXXXXXXX----CGSRRAGLCCSWLSSLLLGWDWLPIATSGAPVAG 167
            C  +GARLCGR SECDDGNGXXXXXXXXXXXXXXXXXXXXXXXXXX    C SRRAG CCSWLSSLLLGWDWLPIATSGAPVAG
Sbjct:   16 CRRTGARLCGRNSECDDGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRSRRAGPCCSWLSSLLLGWDWLPIATSGAPVAG 99
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10046.69.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KFU5_9PHAE1.320e-1788.10RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.585

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10046contigEcto-sp13_S_contig10046:2576..4498 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10046.69.1mRNA_Ecto-sp13_S_contig10046.69.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10046 2576..4499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10046.69.1 ID=prot_Ecto-sp13_S_contig10046.69.1|Name=mRNA_Ecto-sp13_S_contig10046.69.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp
CHSEAWSRVLLFFRGVAVPCSLELAAVTLIRCPFNAGNDALLLPHASRVA
HHVEYGTHYGHGCVCVRARESCGTPPPEVPSEAPPVECLLSGARLCGRTS
ECDDGNGGCCCCCGCERPETNGGNNSNGGGGSSCGSRRAGLCCSWLSSLL
LGWDWLPIATSGAPVAGGGGQALGGSASAAIPRHSSGGTGRGGGGSGGAV
GDMAVAL
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