prot_Ecto-sp13_S_contig10762.691.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10762.691.1
Unique Nameprot_Ecto-sp13_S_contig10762.691.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length567
Homology
BLAST of mRNA_Ecto-sp13_S_contig10762.691.1 vs. uniprot
Match: D7FNJ8_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ8_ECTSI)

HSP 1 Score: 864 bits (2233), Expect = 8.960e-302
Identity = 497/579 (85.84%), Postives = 513/579 (88.60%), Query Frame = 0
Query:    1 MDTIGSPAASSCDSGSDSDGFLHVSSREDYVMVQSPKRSRAEAGAAPAAASSVGAXXXXXXXXT------------VGNGGGVGTASHNSDHQPATSVSRPSAFARKLASSIDRSRAAATEAATTAAKAATANITGPSSPLGPYHPPLHQHQQQKRPQRTKVAAVSPEAPWLPSHYVERSALLERVVNELIGKKHVDNRHARNSSTTKSGDSQLHNNSTIDNNGGNTXXXXXXXXXXXXXNDDGREGAAYALLGDSGSGKTVLASAIVSHPEVRKKFWRGIFWVSLGRADVTRATAGTGGDLLRAVFHALAAQVVAIAHPLPANSDEAAAATALLARSASPGETLKKLASSNGSSRLGGQNRLLVLDGISESFTDNVNTVAELQRAGFVVLVTGAKPCALSLSQSKRTSSPAKPEAGWDLGSGRSTPQHCRFHVSVLQAVTSNEAVEMLLKRVRRPGGAAMEVEATTRAGWAEQKAGDAGDPAVDAATRASFESCALQVVNECGEIAPLALAIVGAVVARQDERGGRRDNSPPCDYAERCRQIERQLIRDHGRCGDGYALSRVIELGFGALAGDKTKDC 567
            MD +GSPAASSCDSGSDSDGF+HVSS ED+VMVQS KRSRAEAGAAPAAASSVG     XXXX             VG GGGVGTASHNSD QPATS+SRP+AFARKLASSIDRS AAATEAATTAAKA TANITGPSS        LHQ QQ KRP RTKVAAVSPEAP LPSHYVER ALLE+VVNELIGKKH+DNRHARNSSTTKSGD+QLHN           XXXXXXXXXXXXX  DGRE AAYALLGDSGSGKTVLASAIVSHPEVR+KFWRGIFWVSLGRA VTRATAGTGGDLLRAVFHALAAQVVAIAHPLPANSDEAAAATALLAR ASPGETLK+LASSNG SRLGGQ+RLLVLDGISESFTDNVN VAELQRAGFVVLVTG KPCALSL QSKRTSSPAKPEAGWDLG+GRSTPQHCRFHVSVLQAVT NEAVEMLLKRVRRPGGAA+ +EATT A WAEQKAGDAGDP VDAATRASFESCALQVVN+CGEIAPLALAIVGAVVA QDERGGRRDNSPPCDYAERCRQIERQLIRDH RCGDGYALSRV+ELGFGAL GDKTKDC
Sbjct:    1 MDNVGSPAASSCDSGSDSDGFVHVSSGEDFVMVQSSKRSRAEAGAAPAAASSVGVDAAGXXXXXXXXXXXXXXXXXVGTGGGVGTASHNSDQQPATSISRPTAFARKLASSIDRSHAAATEAATTAAKAXTANITGPSSXXXXXXXRLHQLQQ-KRPPRTKVAAVSPEAPRLPSHYVERWALLEKVVNELIGKKHLDNRHARNSSTTKSGDNQLHNXXXXXXXXXXXXXXXXXXXXXXXXXGDGRESAAYALLGDSGSGKTVLASAIVSHPEVRRKFWRGIFWVSLGRAGVTRATAGTGGDLLRAVFHALAAQVVAIAHPLPANSDEAAAATALLARPASPGETLKQLASSNGGSRLGGQSRLLVLDGISESFTDNVNAVAELQRAGFVVLVTGEKPCALSLLQSKRTSSPAKPEAGWDLGNGRSTPQHCRFHVSVLQAVTPNEAVEMLLKRVRRPGGAAIALEATTPAAWAEQKAGDAGDPGVDAATRASFESCALQVVNDCGEIAPLALAIVGAVVAGQDERGGRRDNSPPCDYAERCRQIERQLIRDHDRCGDGYALSRVMELGFGALPGDKTKDC 578          
BLAST of mRNA_Ecto-sp13_S_contig10762.691.1 vs. uniprot
Match: A0A6H5L2M9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2M9_9PHAE)

HSP 1 Score: 750 bits (1937), Expect = 5.790e-261
Identity = 435/569 (76.45%), Postives = 458/569 (80.49%), Query Frame = 0
Query:    1 MDTIGSPAASSCDSGSDSDGFLHVSSREDYVMVQSPKRSRAEAGAAPAAASSVGAXXXXXXXXTVGNGGGVGTASHNSDHQPATSVSRPSAFARKLASSIDRSRAAATEAATTAAKAATANITGPSSPLGPYHPPLHQHQQQKRPQRTKVAAVSPEAPWLPSHYVERSALLERVVNELIGKKHVDNRHARNSSTTKSGDSQLHNNSTIDNNGGNTXXXXXXXXXXXXXNDDGREGAAYALLGDSGSGKTVLASAIVSHPEVRKKFWRGIFWVSLGRADV-TRATAGTGGDLLRAVFHALAAQVVAIAHPLPANSDEAAAATALLARSASPGETLKKLASSNGSSRLGGQNRLLVLDGISESFTDNVNTVAELQRAGFVVLVTGAKPCALSLSQSKRTSSPAKPEAGWDLGSGRSTPQHCRFHVSVLQAVTSNEAVEMLLKRVRRPGGAAMEVEATTRAGWAEQKAGDAGDPAVDAATRASFESCALQVVNECGEIAPLALAIVGAVVARQDERGGRRDNSPPCDYAERCRQIERQLIRDHGRCGDGY-ALSRVIELGFGALAGDKTKDC 567
            MDT GSPAAS CD GSDSDGF+HVSSREDYV+VQSPK S  EA AA    SSVGA   XXXXX         TASHNSDHQPATS+SRP+A  RKLASSIDRS AAATEAATTAAKAATANITGPSSP GPYH   H HQQQ RP RT+VAAVSP+AP LPSHYVERSALLE+VVNELIGKKH+DNRH RNSSTTKSGD+QLH           T           XXNDDGREGA+YALLGDSGSGKTVLASAI SHPEVR+KFWRGIFWVSLGR  V TRA  GTGGDLLRAVFHALAAQVVA+AH LPANSDE  AATALL+RSASPGETLKKLASSNGS  LGGQ+RLLVLDGISESFTDNV+T+AELQRAGFVVLVTGAKP                 EAGWDLG+GRST QHCRFHVS LQ+VT  EAV MLLK VRRPG AAMEVE +T AGWAEQ AGDAGDP VDAATRAS ESCALQVVN CGEIAPLALAIVGAVVA QDERG RRDNSPPCDYA+RC QIE+ + R    CGDGY A SRV+ELGF AL GDKTKDC
Sbjct:    1 MDTAGSPAASCCDRGSDSDGFVHVSSREDYVIVQSPKMSEEEAAAALXXXSSVGANAAXXXXXXXXXXXXXXTASHNSDHQPATSISRPTACTRKLASSIDRSHAAATEAATTAAKAATANITGPSSPPGPYHSFRHHHQQQIRPPRTRVAAVSPKAPRLPSHYVERSALLEKVVNELIGKKHLDNRHVRNSSTTKSGDNQLHXXXXXXXXXXXTNTSGDRHGNENXXNDDGREGASYALLGDSGSGKTVLASAIASHPEVRRKFWRGIFWVSLGRGVVVTRARTGTGGDLLRAVFHALAAQVVAMAHLLPANSDEETAATALLSRSASPGETLKKLASSNGSPWLGGQSRLLVLDGISESFTDNVDTMAELQRAGFVVLVTGAKP-----------------EAGWDLGNGRSTLQHCRFHVSELQSVTLKEAVAMLLKTVRRPGRAAMEVEDSTPAGWAEQNAGDAGDPGVDAATRASIESCALQVVNHCGEIAPLALAIVGAVVAGQDERGSRRDNSPPCDYAKRCHQIEQHVTRRQD-CGDGYDAFSRVMELGFDALPGDKTKDC 551          
BLAST of mRNA_Ecto-sp13_S_contig10762.691.1 vs. uniprot
Match: D7FNJ7_ECTSI (Armadillo/beta-catenin repeat family protein / U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ7_ECTSI)

HSP 1 Score: 599 bits (1545), Expect = 4.890e-196
Identity = 378/593 (63.74%), Postives = 419/593 (70.66%), Query Frame = 0
Query:    7 PAASSCDSGSDSDGFLHVSSREDYVMVQSPKRSRAEAGAAPAAASSVGAXXXXXXXXTVGNGGGVGT-ASHNSDHQPATSVSRPSAFARKLASSIDRSRAAATEAATTAAKA-------ATANITGPSSPLGPYHPPLHQHQQQKRPQRTKVAAVSPEAPWLPSHYVERSALLERVVNELIGKKHVDNRHARNSSTTKSGDSQLHNNSTIDNNGGN----------------TXXXXXXXXXXXXXNDDGREGAAYALLGDSGSGKTVLASAIVSHPEVRKKFWRGIFWVSLGRADV-TRATAGTGGDLLRAVFHALAAQVVAIAHPLPANSDEAAAATALLARSASPGETLKKLASSNGSSRLGGQNRLLVLDGISESFTDNVNTVAELQRAGFVVLVTGAKPCALSLSQSKRTSSPAKPEAGW------DLGSGRSTPQHCRFHVSVLQAVTSNEAVEMLLKRVRRPGGAAMEVEATTRAGWAEQKAGDAGDPAVDAATRASFESCALQVVNECGEIAPLALAIVGAVVARQDERGGRRDNSPPCDYAERCRQIERQLIRDHGRCGDGY-ALSRVIELGFGALAGDKTKDC 567
            P ASS D+GSDSDGF+ VS +ED+V ++SP R R  A AAPA A S G            NG      A H+ +HQPAT+ S       +L SSI+RS A AT  ATT            +ANI  PSSPL P HP  H H QQ  P  T+VAAV PEAP LPSHYVERSALLE VVN LI KKH DN HAR  +TT SGD+QL NN  I NNG N                       XXXXXXX+DDG EGAAYALLGDSGSGKTVLASAIVSHPEVR+KFWRGIFWV+LGR  V TRA  GTGG LLRA+ H LAAQVVA+ HPLPAN +EAAAATALLARSAS GETLK+LA+SNG S +G  +RLLVLD ISESFTDN N VAEL+RAGF VLVT ++PCALS+ +SK+    AKPE G       DL  G  T  H R HVSVL   T +EAVEMLLKRVRRPGGA M VEAT+ AGWAE KA +AG P  +A+TRASFESCALQVVN C E+APLALAIVGAV+A QDERGGRRDNS  CDYAERCRQIERQ+ R H  CGDGY A +RV+ELGFGAL GDKTKDC
Sbjct:   10 PRASSSDNGSDSDGFVVVSDQEDFVKLKSPPRPRTAAVAAPAIAPSAGLDEPGLTVGIGSNGXXXXXXAPHHRNHQPATATSPG-----ELVSSINRSPAVAT--ATTXXXXXXXXXXXTSANIVSPSSPLRPNHPCRHHHNQQNSPPWTRVAAVPPEAPRLPSHYVERSALLENVVNMLIAKKHFDNGHARGVTTTNSGDNQLDNNFPIRNNGNNGTHVEKRCKTFFPRGTKNTSGDGXXXXXXXDDDGLEGAAYALLGDSGSGKTVLASAIVSHPEVRRKFWRGIFWVNLGRGGVVTRARTGTGGGLLRALLHDLAAQVVALDHPLPANGEEAAAATALLARSASAGETLKQLATSNGGSHVGELSRLLVLDSISESFTDNPNAVAELERAGFTVLVTCSRPCALSVLRSKQPM--AKPEVGVPGGLPNDLEHGHRTSPHRRIHVSVLHPATPSEAVEMLLKRVRRPGGATMAVEATSPAGWAELKAAEAGGPGANASTRASFESCALQVVNHCREVAPLALAIVGAVIAGQDERGGRRDNSLSCDYAERCRQIERQVTR-HQDCGDGYDAFNRVMELGFGALPGDKTKDC 592          
BLAST of mRNA_Ecto-sp13_S_contig10762.691.1 vs. uniprot
Match: A0A6H5KWN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWN2_9PHAE)

HSP 1 Score: 588 bits (1517), Expect = 6.880e-196
Identity = 365/591 (61.76%), Postives = 404/591 (68.36%), Query Frame = 0
Query:    7 PAASSCDSGSDSDGFLHVSSREDYVMVQSPKRSRAEAGAAPAAASSVGAXXXXXXXXTVGNGGGVGTASHNSDHQPATSVSRPSAFARKLASSIDRSRAAATEAATTAAKAA-----TANITGPSSPLGPYHP-PLHQHQQQKRPQRTKVAAVSPEAPWLPSHYVERSALLERVVNELIGKKHVDNRHARNSSTTKSGDSQLHNNSTIDNNGGNTXXXXXXXXXXXXXN----------------DDGREGAAYALLGDSGSGKTVLASAIVSHPEVRKKFWRGIFWVSLGRADV-TRATAGTGGDLLRAVFHALAAQVVAIAHPLPANSDEAAAATALLARSASPGETLKKLASSNGSSRLGGQNRLLVLDGISESFTDNVNTVAELQRAGFVVLVTGAKPCALSLSQSKRTSSPAKPEAGW------DLGSGRSTPQHCRFHVSVLQAVTSNEAVEMLLKRVRRPGGAAMEVEATTRAGWAEQKAGDAGDPAVDAATRASFESCALQVVNECGEIAPLALAIVGAVVARQDERGGRRDNSPPCDYAERCRQIERQLIRDHGRCGDGY-ALSRVIELGFGALAGDKTKDC 567
            P ASS D+GSDSDGF+ VS +ED+V ++SP R R    AAPAAA S G           G+G     A+   +HQ ATS SRP++    L  SI+RSRA AT               + NI  PSSPL P HP           P  T+VAAV PEAP LPSHYVERSALLE+VVN L+ KKH+DN HA   +TT SGD+QL NN  I NNG N                               DDGREGAAYALLGDSGSGKTVLASAI SHPEVR+KFWRGIFWVSLGR  V TRA  GTGG LLRA+ H LAAQVVA+  PLPAN +EAAAATALLARSAS GETLK+LASSNG S +G  +RLLVLDGISESFTDN N VAEL RAGF VLVT ++PCALS+ QSK+    AKPE G       DL  G  T  H R HVSVL   T NEAVEMLLKRVRRPG A   VEAT+ AGWA Q+A DAGDP  +A+TRASFESCALQVVN CGEIAPLALAIVGAV+A QDE G RRDNSPPC+YAERCR+IER++ R H  CGDGY A SRVIELGF AL GDKTKDC
Sbjct:    6 PRASSSDNGSDSDGFVVVSDQEDFVKLKSPPRPRTATVAAPAAAPSAGPDESGPAVGIGGDGXXXXXATDRRNHQSATSSSRPTSPPGGLVPSINRSRAVATATXXXXXXXXXXXXXSVNIISPSSPLCPNHPCHXXXXXXXNSPSWTRVAAVPPEAPRLPSHYVERSALLEKVVNMLVAKKHLDNGHASGGTTTNSGDNQLDNNLPIRNNGNNGTHVEKCCKTFFPRGTKNTSGDGXXXXXXXXDDGREGAAYALLGDSGSGKTVLASAIASHPEVRRKFWRGIFWVSLGRGGVVTRARTGTGGGLLRALLHDLAAQVVALDLPLPANGEEAAAATALLARSASAGETLKQLASSNGGSHVGELSRLLVLDGISESFTDNPNAVAELGRAGFTVLVTCSRPCALSVLQSKQPM--AKPEVGVPGGLSNDLEHGHRTSPHRRIHVSVLHPTTPNEAVEMLLKRVRRPGEATTAVEATSPAGWAAQRATDAGDPGANASTRASFESCALQVVNHCGEIAPLALAIVGAVIAGQDETGDRRDNSPPCNYAERCRRIERRITR-HQDCGDGYDAFSRVIELGFNALPGDKTKDC 593          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10762.691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FNJ8_ECTSI8.960e-30285.84Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ect... [more]
A0A6H5L2M9_9PHAE5.790e-26176.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNJ7_ECTSI4.890e-19663.74Armadillo/beta-catenin repeat family protein / U-b... [more]
A0A6H5KWN2_9PHAE6.880e-19661.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 159..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10762contigEcto-sp13_S_contig10762:3..2596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10762.691.1mRNA_Ecto-sp13_S_contig10762.691.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10762 3..2596 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10762.691.1 ID=prot_Ecto-sp13_S_contig10762.691.1|Name=mRNA_Ecto-sp13_S_contig10762.691.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=567bp
MDTIGSPAASSCDSGSDSDGFLHVSSREDYVMVQSPKRSRAEAGAAPAAA
SSVGADGAGPAGPTVGNGGGVGTASHNSDHQPATSVSRPSAFARKLASSI
DRSRAAATEAATTAAKAATANITGPSSPLGPYHPPLHQHQQQKRPQRTKV
AAVSPEAPWLPSHYVERSALLERVVNELIGKKHVDNRHARNSSTTKSGDS
QLHNNSTIDNNGGNTNTSGDGNGNENSNNDDGREGAAYALLGDSGSGKTV
LASAIVSHPEVRKKFWRGIFWVSLGRADVTRATAGTGGDLLRAVFHALAA
QVVAIAHPLPANSDEAAAATALLARSASPGETLKKLASSNGSSRLGGQNR
LLVLDGISESFTDNVNTVAELQRAGFVVLVTGAKPCALSLSQSKRTSSPA
KPEAGWDLGSGRSTPQHCRFHVSVLQAVTSNEAVEMLLKRVRRPGGAAME
VEATTRAGWAEQKAGDAGDPAVDAATRASFESCALQVVNECGEIAPLALA
IVGAVVARQDERGGRRDNSPPCDYAERCRQIERQLIRDHGRCGDGYALSR
VIELGFGALAGDKTKDC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase