mRNA_Ecto-sp13_S_contig200.6519.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig200.6519.1 vs. uniprot
Match: D8LK51_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK51_ECTSI) HSP 1 Score: 438 bits (1126), Expect = 2.710e-151 Identity = 215/223 (96.41%), Postives = 216/223 (96.86%), Query Frame = 1
Query: 1 KDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLRKKILGTDQAGTSSLSPTGTRELKVSTAATIGAGEGSTETDRAQEHSDR 669
KDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLR+KILGTDQA SSL PTGTRELKVSTAAT GAGEGSTE DR QEHS R
Sbjct: 13 KDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLREKILGTDQAAKSSLPPTGTRELKVSTAATTGAGEGSTEADRTQEHSGR 235
BLAST of mRNA_Ecto-sp13_S_contig200.6519.1 vs. uniprot
Match: A0A7S2V268_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V268_9STRA) HSP 1 Score: 266 bits (679), Expect = 4.320e-83 Identity = 119/183 (65.03%), Postives = 147/183 (80.33%), Query Frame = 1
Query: 1 KDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLRKKILGTDQ 549
+DY+LTIEYKHLKQ+APGGVFVIPS LR+W+GVIFVRRGHY+ G+FKFRV+LP +YN TWP + FTS VFNP+V P TGELDL+S +PEW P +HYMVT LT+LKK+FYMK F P PANP AQ LF +K FLE V CVRES+E +++N+ GSSL+F+EPKPAH+ LRK I +++
Sbjct: 41 RDYKLTIEYKHLKQHAPGGVFVIPSFESLRVWWGVIFVRRGHYSKGIFKFRVDLPDEYNGPNTWPKVTFTSRVFNPLVFPQTGELDLKSAYPEWNPERHYMVTVLTFLKKIFYMKSFDGPNPANPVAQNLFHSNKVEFLEEVNNCVRESKENIFKNDPGSSLKFSEPKPAHESLRKSIFESEE 223
BLAST of mRNA_Ecto-sp13_S_contig200.6519.1 vs. uniprot
Match: A0A836CDQ7_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDQ7_9STRA) HSP 1 Score: 234 bits (596), Expect = 3.180e-71 Identity = 108/181 (59.67%), Postives = 135/181 (74.59%), Query Frame = 1
Query: 1 KDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLP-GKHYMVTALTYLKKVFYMKDFSFPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLRKKILG 540
KDY++ +EYKHL Q+APGGV+V P ++ LRIW+GVIFVRRG YANG+FKF VELP +Y DAG WP + F S+VFNP+V P GELDLR + P W P G M+ +TY+KK+FY KDF+ P NPEAQ +F+D+K GF ER ACV ES YE+ GSSL+FTEP+PAHD + +ILG
Sbjct: 27 KDYKIAVEYKHLWQHAPGGVYVTPDLDDLRIWHGVIFVRRGMYANGMFKFSVELPQNYGDAGAWPRLVFMSTVFNPLVKPSNGELDLRLMMPGWNPAGGDCMLKVITYMKKIFYTKDFALAAPPNPEAQRMFRDNKSGFAERAAACVEESLSRRYESPPGSSLKFTEPRPAHDSVAARILG 207
BLAST of mRNA_Ecto-sp13_S_contig200.6519.1 vs. uniprot
Match: A0A7S2R8I5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8I5_9STRA) HSP 1 Score: 218 bits (556), Expect = 6.260e-65 Identity = 102/185 (55.14%), Postives = 133/185 (71.89%), Query Frame = 1
Query: 1 KDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFS---FPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLRKKILGTD 546
KD +LTIEYKHLKQN+PGGV V+PS LRIW GVIFVR+G Y +G+FKF + +P +YND WP +RF S V NP V+P TG LDLRS FP+W P H+MV+ LT+LKK+FY+KD + +PANPEA +F D+ + +RVE V SQ TVYEN S L F++P+ AHD++R+ +L T+
Sbjct: 51 KDLKLTIEYKHLKQNSPGGVLVVPSFEDLRIWNGVIFVRKGLYQDGIFKFVITIPAEYNDRNVWPEVRFVSEVVNPYVNPQTGILDLRSNFPQWDPNSHFMVSVLTFLKKIFYLKDSDVADYRKPANPEALRMFMRDRAQYRQRVEELVATSQSTVYENPHESPLAFSQPQAAHDQVRQTLLETE 235
BLAST of mRNA_Ecto-sp13_S_contig200.6519.1 vs. uniprot
Match: A0A7R9W3Q1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3Q1_9STRA) HSP 1 Score: 216 bits (550), Expect = 2.700e-64 Identity = 97/175 (55.43%), Postives = 134/175 (76.57%), Query Frame = 1
Query: 1 KDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLR 525
+DY++TIEYKHLKQ+APGGV++IPS++ LR+++GVIFVRRG + NG+FKFRV+LPP YND WP I F+S V+NP V+P TGELD+++ +P W P +HY+VT LTYLKK+FYMK F ANP+A+ L + + + ++VEACVRESQ +V+ NE + +F+E + H LR
Sbjct: 56 RDYKVTIEYKHLKQHAPGGVYLIPSLDDLRVFHGVIFVRRGPFTNGIFKFRVKLPPRYNDVNAWPQIVFSSYVYNPHVNPETGELDVQAAYPTWDPHRHYLVTVLTYLKKIFYMKGFGEEARANPDARDLARSNPPAYRKKVEACVRESQRSVFVNEPDCTAKFSEDEVCHQVLR 230
BLAST of mRNA_Ecto-sp13_S_contig200.6519.1 vs. uniprot
Match: A0A7S1ZU80_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZU80_TRICV) HSP 1 Score: 216 bits (550), Expect = 4.470e-64 Identity = 101/176 (57.39%), Postives = 129/176 (73.30%), Query Frame = 1
Query: 1 KDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPRP-ANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLR 525
+DY++TIEYKHLKQ+APGGV+++PS+ LR+++GV+FVRRG + NGVFKFRV LPP YND P I F S V+NP V P TGELD++ +P W P +HY+VT LTYLKK+FYMK F P ANPEA+ L + D + + RVEACVRESQ +V+ NEEG + F E + H LR
Sbjct: 37 RDYKVTIEYKHLKQHAPGGVYLVPSLTDLRLFHGVVFVRRGPFTNGVFKFRVSLPPRYNDFNAHPSIHFGSYVYNPHVDPETGELDVKGAYPTWDPHRHYLVTVLTYLKKIFYMKTFGTDEPVANPEARELVRRDPKEYRRRVEACVRESQRSVFVNEEGCTAEFHEDRVCHQILR 212
BLAST of mRNA_Ecto-sp13_S_contig200.6519.1 vs. uniprot
Match: A0A7S1VY26_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VY26_9STRA) HSP 1 Score: 213 bits (543), Expect = 4.490e-63 Identity = 96/175 (54.86%), Postives = 132/175 (75.43%), Query Frame = 1
Query: 1 KDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLR 525
+DY++TIEYKHL+Q+APGGV++IPS+ LR +YGVIFVRRG + NG+FKF+++LPP YND TWP I FTS+VFNP V P TGELD++S +P W P +HY+VT LT+LKK+FY+K F AN EA+ L + + + +V+ CVR+SQ+ V+ NE+G + +FTE +H LR
Sbjct: 48 RDYKVTIEYKHLRQHAPGGVYLIPSLTDLRHFYGVIFVRRGPFTNGIFKFQLKLPPTYNDLNTWPTITFTSNVFNPHVHPKTGELDVKSAYPRWDPHRHYLVTILTFLKKIFYVKTFGPDAKANKEAKKLAEKEPAAYRLKVDECVRDSQKDVFVNEDGCTAKFTEETLSHRVLR 222
BLAST of mRNA_Ecto-sp13_S_contig200.6519.1 vs. uniprot
Match: A0A7S4APQ2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4APQ2_9STRA) HSP 1 Score: 211 bits (536), Expect = 2.480e-62 Identity = 97/175 (55.43%), Postives = 133/175 (76.00%), Query Frame = 1
Query: 1 KDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLR 525
+DY++TIEYKHLK +APGGV++IPS++ LR ++G+IFVRRG + NG+FKFR+ LPP YND WP I F+ VFNP V+ +GELD++S +P W P +HY+VT LTYLKK+FY K+F+ R AN A+ L + D + + ++VE CV ESQ++VY NE+GS+ +FTE K AH LR
Sbjct: 27 RDYKVTIEYKHLKSHAPGGVYLIPSMDSLRHFHGIIFVRRGPFTNGIFKFRLSLPPKYNDTNMWPRIIFSGHVFNPYVNEESGELDVQSAYPTWDPSRHYLVTVLTYLKKIFYAKNFADAR-ANTVAKELAETDPQAYKKKVEECVHESQKSVYVNEKGSTAQFTEEKVAHRVLR 200
BLAST of mRNA_Ecto-sp13_S_contig200.6519.1 vs. uniprot
Match: A0A024G8I5_9STRA (UBC core domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G8I5_9STRA) HSP 1 Score: 211 bits (536), Expect = 4.950e-62 Identity = 97/180 (53.89%), Postives = 129/180 (71.67%), Query Frame = 1
Query: 1 KDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFS--FPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLRKKI 534
KDY L IEYKHL+Q+ P G++V+PS ++ RIWYG IF+ +G Y NG+FKF +E+P DYN GT+P I F+SS+F+P VSP T +LDL++ FPEW P HYMV ALT+LK +FYMK+F ANP A LF D+ ++ VE CV S E+V+++E SS+RFT P PAH+ LRK+
Sbjct: 41 KDYGLMIEYKHLRQHVPAGIYVLPSFDNSRIWYGTIFIHQGLYRNGIFKFTIEIPSDYNGPGTYPSIVFSSSIFHPYVSPQTRKLDLKAKFPEWDPELHYMVAALTFLKSIFYMKEFPEILDNVANPNALKLFHDELETYVTNVERCVSGSLESVFDDEPNSSIRFTRPIPAHENLRKEF 220
BLAST of mRNA_Ecto-sp13_S_contig200.6519.1 vs. uniprot
Match: F0W1H7_9STRA (Uncharacterized protein AlNc14C7G945 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W1H7_9STRA) HSP 1 Score: 211 bits (536), Expect = 5.430e-62 Identity = 96/180 (53.33%), Postives = 129/180 (71.67%), Query Frame = 1
Query: 1 KDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDF--SFPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLRKKI 534
KDY L IEYKHL+Q+ P G++V+PS ++ RIW+G IF+ +G Y NG+FKF +E+P DYN GT+P I F+++VF+P VSP T +LDL++ FPEW P HYMV ALT+LK +FYMK+F + ANP A LF D+ ++ VE CV S E VYE++ SS+RFT P PAH+ LRK+
Sbjct: 41 KDYGLMIEYKHLRQHVPAGIYVLPSFDNSRIWFGTIFIHQGLYRNGIFKFTIEIPSDYNGPGTYPSITFSTAVFHPYVSPQTRKLDLKAKFPEWDPELHYMVAALTFLKSIFYMKEFPETINNVANPNALKLFHDELETYVTNVERCVSGSLENVYEDDSSSSIRFTRPTPAHENLRKEF 220 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig200.6519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig200.6519.1 >prot_Ecto-sp13_S_contig200.6519.1 ID=prot_Ecto-sp13_S_contig200.6519.1|Name=mRNA_Ecto-sp13_S_contig200.6519.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp MVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPRPANPEback to top mRNA from alignment at Ecto-sp13_S_contig200:19682..21933+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig200.6519.1 ID=mRNA_Ecto-sp13_S_contig200.6519.1|Name=mRNA_Ecto-sp13_S_contig200.6519.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2252bp|location=Sequence derived from alignment at Ecto-sp13_S_contig200:19682..21933+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig200:19682..21933+ >mRNA_Ecto-sp13_S_contig200.6519.1 ID=mRNA_Ecto-sp13_S_contig200.6519.1|Name=mRNA_Ecto-sp13_S_contig200.6519.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=444bp|location=Sequence derived from alignment at Ecto-sp13_S_contig200:19682..21933+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |