prot_Ecto-sp13_S_contig10041.64.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10041.64.1
Unique Nameprot_Ecto-sp13_S_contig10041.64.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length569
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10041.64.1 vs. uniprot
Match: D7FRV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV2_ECTSI)

HSP 1 Score: 661 bits (1705), Expect = 2.250e-234
Identity = 344/382 (90.05%), Postives = 354/382 (92.67%), Query Frame = 0 
Query:  188 DETGTSNFQTVSNDTLFSVSCGGCSTVTPAPTAATTAAPTIFVGGEDCGALTVSAPSAPYLEGCYFDTRLTQSWYSEFVEVELPSFTQDGSLAAGQLWISWLSYATNETFWGLFFYPTFTSSSEQLVSVYCLSQEEVTEAYPGNTTWDCDLDGDYSTTFGIEKTKFSVTCGCATGSAQGGTLSESPXXXXXXXXXXXXXXXGCMAGDPFLVTLPAVPQVEGCYVDSNLNDTAGYPIYRSTGGAESADGQSFVLPTGDGPVEETYYKDWTLVLFEFGTEEPRVICSRGMDGSDGINGHPAHEVASAYDDTPGVIFWHCDLEGTGNVSYINASSSIFRIECGCASSLDFNRAMGRENANQRSLRTTLVLFS-LSMAMGVVLGAL 568
            DETGTSNFQTVSNDTLFSVSCGGCS+ TPAPTAATTAAPTIF+GGEDCGALTVSAPSAP++EGCYFDTRLTQSWYSEFVE+ELPSFTQDGSLAAGQLW+SWL+YATNETFWGLFFYPTFTSSSEQLVSVYCLSQEEVTEA P NTTWDCDLDGDYSTTFGIE+TKFSVTCGCATG           XXXXXXXXXXXXXXX C+AGDPFLVTLPAVPQVEGCYVDSNLNDTAGY IYRSTGGAESADGQSFVLPTGDGPVEETYYKDWTLVLFEFG EEPRVICSRGMD SDG NGHPAH VASAYDDTPGVIFWHCDLEGTGNVSY+NASSSI RIECGC SSLDFN A GR NANQRSL TTLVL S LSMAMGVVLGAL
Sbjct:   44 DETGTSNFQTVSNDTLFSVSCGGCSSATPAPTAATTAAPTIFIGGEDCGALTVSAPSAPHVEGCYFDTRLTQSWYSEFVEIELPSFTQDGSLAAGQLWLSWLTYATNETFWGLFFYPTFTSSSEQLVSVYCLSQEEVTEATPANTTWDCDLDGDYSTTFGIEETKFSVTCGCATGGXXXXXXXXXXXXXXXXXXXXXXXXXXCVAGDPFLVTLPAVPQVEGCYVDSNLNDTAGYAIYRSTGGAESADGQSFVLPTGDGPVEETYYKDWTLVLFEFGIEEPRVICSRGMDSSDGTNGHPAHGVASAYDDTPGVIFWHCDLEGTGNVSYMNASSSILRIECGCPSSLDFNGATGRANANQRSLGTTLVLLSSLSMAMGVVLGAL 425
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10041.64.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRV2_ECTSI2.250e-23490.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 568..568
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 548..567
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..547
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.546

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10041contigEcto-sp13_S_contig10041:376..4687 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10041.64.1mRNA_Ecto-sp13_S_contig10041.64.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10041 2..4758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10041.64.1 ID=prot_Ecto-sp13_S_contig10041.64.1|Name=mRNA_Ecto-sp13_S_contig10041.64.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=569bp
MVHLVFVSHVTSFSIVWSSHVCFACFTPSSLRRQAHPASHPVSFQVYQTP
SNLDSARRGILDGARTHIKNNFVNRGSTGRGLEDARALQDACPSGSPLFV
SSSMFPSAEGCYVASDTLLSGGEPVYFITSATSPGQTILAAPKDPDDDDE
GPLFWGVAYVTSSTAVLQCASVEDASLVNPADAAWMCDETGTSNFQTVSN
DTLFSVSCGGCSTVTPAPTAATTAAPTIFVGGEDCGALTVSAPSAPYLEG
CYFDTRLTQSWYSEFVEVELPSFTQDGSLAAGQLWISWLSYATNETFWGL
FFYPTFTSSSEQLVSVYCLSQEEVTEAYPGNTTWDCDLDGDYSTTFGIEK
TKFSVTCGCATGSAQGGTLSESPTPAPTPGPTPSPTVSGCMAGDPFLVTL
PAVPQVEGCYVDSNLNDTAGYPIYRSTGGAESADGQSFVLPTGDGPVEET
YYKDWTLVLFEFGTEEPRVICSRGMDGSDGINGHPAHEVASAYDDTPGVI
FWHCDLEGTGNVSYINASSSIFRIECGCASSLDFNRAMGRENANQRSLRT
TLVLFSLSMAMGVVLGAL*
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