|
|
Homology
BLAST of mRNA_Ecto-sp13_S_contig107.643.1 vs. uniprot
Match: A0A6H5JC87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC87_9PHAE) HSP 1 Score: 908 bits (2346), Expect = 4.580e-316 Identity = 705/1117 (63.12%), Postives = 716/1117 (64.10%), Query Frame = 2
Query: 89 MDGGASSTDAFRMPAEGEELTTPFSEFVVRYGHTPRLVRNMAAMAGVAAELPPRMEEPYRLVYFVVTDQMRTTIAALRAVLKEGLQAPLRTPTAFIIDELHTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSEMYIRSFWELRGFEEETSPEVLRACSLDLDDGFNTGASTTLLRAGAAYTEYQPANDERLSM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RTLAARGLLAIPSSGSRDSLVDLTGGSRSLAEQDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIARSDGARHDGAVRGGEGETSAGDDTETEEDADYGGQLSGXDADAXXGGIASTAAXXXXXXXXXXXXXXRSPVRAGEEHGAXXXXXXXXXXXXXXXGRRTGGVVEDGRGRDSDNDGVTRRLRRRRDESGSSTPGEPSPCGADGAASVGMELGGVGAGRHGNEGRRSSSRDGGDGGNTASLTENVCITAARDVGSGLAVASETTAPHAPRPLDAAAAAAREGSSNRPSSLPPSRPASPCPSSASSCSFTLGPAPSRSRTSTWNQQIPTTVGALGHRDPNSAMTVSKENDPHXXXXXXX--ARKAVYQPPPRGLGTRGQQHQHQATFAGDGGGMIGALGGVVYPTTTAGXXXXXXXXXXXXXXXXXXXXXXXXXGLISDGIEPSDVVMRDFGVGSDGLDGGGRLDDKLIAVAGWEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRKGVAATTPTGGGPDVAVLPSFGSLEARNSTGVSVGAGVHRHGSDASGAALPSTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-AGSQAPAWLGGWEDGEAVSFTGKGKGKGRCRD 2674
MDGGASSTDAFRMPAEGEELTTPFSEFVVRYGHTPRLVRN AA+AGVAAELPPRMEEPYRLVYFVVTDQMRTTIA LRAVLKEGLQAPLRTPTAFIIDELHTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSE+YIRSFWELRGFEEETSPEVLRAC+LDLDDG NTGASTTLLRAGAAYTEYQPANDERLS+ RTLAARGLLAIPSSGSRD +VDLT SRSLAEQD XXXXXXXXXXXXXXXXX I RSD ARHD AVRGGEGETS GGQLSGXDADA GGIASTAAXXXXXXXXXX RS VRAG E GAXXXXXXXXXXXXXXX RR GGVVEDGR GV+RRLRRRRDESGSSTPGEPSPCGADGAASVGMELGGVGAGR GNEGRRSSSRDGGD GNTA LTENVCITAARDVGSGL VASE APHAPRPLDAAAAAAREGSSNRPSSLPPSRPASPCPSSASSCSFTLGP PSRSRT TWNQQ PTTVGA GHRDPNSAMTVSKENDPH ARKAVYQPPP GLG R +QHQHQA FAGDGGGMIGALGGVVYPTTTAG GL SDGIEP+DV+MRDFGVG+DGLDG GRLDDKLIAVAGWEGD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGGPDVAVLPSFGSLEAR STGV VGAGVH HGSDA GA LPSTCGG XXXXXXXXXXXXXXXXXXXXXXXXXXX AG+QAPAWLGGWEDGEAVSFTGKGKGKGRCRD
Sbjct: 1 MDGGASSTDAFRMPAEGEELTTPFSEFVVRYGHTPRLVRNTAAIAGVAAELPPRMEEPYRLVYFVVTDQMRTTIATLRAVLKEGLQAPLRTPTAFIIDELHTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSELYIRSFWELRGFEEETSPEVLRACNLDLDDGSNTGASTTLLRAGAAYTEYQPANDERLSITRPFYHGGDGYLTAAGAXXXXXXXXXPTLAGSAAFMGQGRTGMESSGYGEGIGASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGETVLPPSSRLLTNERLAQHNEEEKAKGLALPWGTLEQSSKTAEASMLSAAGDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVGATVAGMLGWTPSDRQIVAATCGTASGGGGIVDRRTLAARGLLAIPSSGSRDGVVDLTCRSRSLAEQDXXXXXXXXXXXXXXXXXXXSCRGGGDAAAATAIERSDDARHDEAVRGGEGETSXXXXXXXXXXXXXGGQLSGXDADAAGGGIASTAAXXXXXXXXXXA---RSQVRAGVERGAXXXXXXXXXXXXXXXXRRAGGVVEDGRXXXXXXXGVSRRLRRRRDESGSSTPGEPSPCGADGAASVGMELGGVGAGRDGNEGRRSSSRDGGDDGNTALLTENVCITAARDVGSGLGVASEIAAPHAPRPLDAAAAAAREGSSNRPSSLPPSRPASPCPSSASSCSFTLGPVPSRSRTCTWNQQQPTTVGAPGHRDPNSAMTVSKENDPHHDRHLHQDQARKAVYQPPPMGLGARCRQHQHQAAFAGDGGGMIGALGGVVYPTTTAGGGSGADVPGFGAGRFGNVGVGGGGGGLTSDGIEPNDVMMRDFGVGADGLDGVGRLDDKLIAVAGWEGDDNDEELRLVMEASRQSHEEEMIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------NGGGPDVAVLPSFGSLEARKSTGVGVGAGVHGHGSDAGGAVLPSTCGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGAQAPAWLGGWEDGEAVSFTGKGKGKGRCRD 1107
BLAST of mRNA_Ecto-sp13_S_contig107.643.1 vs. uniprot
Match: D7G1U4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U4_ECTSI) HSP 1 Score: 530 bits (1366), Expect = 1.230e-175 Identity = 492/799 (61.58%), Postives = 499/799 (62.45%), Query Frame = 2
Query: 251 MEEPYRLVYFVVTDQMRTTIAALRAVLKEGLQAPLRTPTAFIIDELHTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSEMYIRSFWELRGFEEETSPEVLRACSLDLDDGFNTGASTTLLRAGAAYTEYQPANDERLSMRTLAARGLLAIPSSGSRDSLVDLTGGSRSLAEQDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIARSDGARHDGAVRGGEGETSAGDDTETEEDADYGGQLSGXDADAXXGGIASTAAXXXXXXXXXXXXXXRSPVRAGEEHGAXXXXXXXXXXXXXXXGRRTGGVVEDGRGRDSDNDGVTRRLRRRRDESGSSTPGEPSPCGADGAASVGMELGGVGAGRHGNEGRRSSSRDGGDGGNTASLTENVCITAARDVGSGLAVASETTAPHAPRPLDAAAAAAREGSSNRPSSLPPSRPASPCPSSASSCSFTLGPAPSRSRTSTWNQQIPTTVGALGHRDPNSAMTVSKENDPHXXXXXXX--ARKAVYQPPPRGLGTRGQQHQHQATFAGDGGGMIGALGGVVYPTTTAGXXXXXXXXXXXXXXXXXXXXXXXXXGLISDGIEPSDVVMRDFGVGSDGLDGGGRLDDKLIAVAGWEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRKGVAATTPTGGGPDVAVLPSFGSLEARNSTGVSVGAGVHRHGSDASGAALPSTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGSQAPAWLGGWEDGEAVSFT 2641
MEEPYRLVYFVVTDQMRTTIAALRAVLKEGLQAPLRTPTAFIIDELHTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSE+YIRSFWELRGFEEETSPEVLRACSLDLDDGF TGA+TTLLRAGAAYTEYQPANDERLSMRTLAARGLLAIPSSGSRD +VDLTGGSRSLAEQDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I RSDGARHDGAVR X ADA XGGIAS+ XXXXXXXXXXXX PTTVGALGHRDPN AMT SKENDP XXXXXXX RKAVYQPPPRGLG RGQQHQHQA FAGDGGGMIGALGGVVY TTAG XXX GLISDGIEPSDV+MRDFGVG+DGLDGGGRLDDKLIAVAGWEGD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSRKGVAA TP GGGPDVAVLPSFGSL AR STGV HGSDASGAALPSTCGG XXXXXXXXXXXXXXXXXXXXXXXXXX G+QAPAWLGGWEDGEAVSFT
Sbjct: 1 MEEPYRLVYFVVTDQMRTTIAALRAVLKEGLQAPLRTPTAFIIDELHTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSELYIRSFWELRGFEEETSPEVLRACSLDLDDGFKTGAATTLLRAGAAYTEYQPANDERLSMRTLAARGLLAIPSSGSRDGVVDLTGGSRSLAEQDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIERSDGARHDGAVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXADAAXGGIASSXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XPTTVGALGHRDPNRAMTASKENDPXXXXXXXXDHGRKAVYQPPPRGLGARGQQHQHQAAFAGDGGGMIGALGGVVYSPTTAGGTGGADVPGLGAGRFGNVGVGXXXGGLISDGIEPSDVIMRDFGVGADGLDGGGRLDDKLIAVAGWEGDDNDEELRRVMEASRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----LSRKGVAAATPNGGGPDVAVLPSFGSLGARESTGVGXXXXXXGHGSDASGAALPSTCGGAXXXXXXXXXXXXXXXXXXXXXXXXXX----GAQAPAWLGGWEDGEAVSFT 594
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2677 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Cds size | 2589 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462547.9541032-UTR-Ecto-sp13_S_contig107:30712..30800 | 1681462547.9541032-UTR-Ecto-sp13_S_contig107:30712..30800 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig107 30713..30800 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462547.9666684-CDS-Ecto-sp13_S_contig107:30800..30968 | 1681462547.9666684-CDS-Ecto-sp13_S_contig107:30800..30968 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig107 30801..30968 + |
| 1681462547.9769378-CDS-Ecto-sp13_S_contig107:31165..31248 | 1681462547.9769378-CDS-Ecto-sp13_S_contig107:31165..31248 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig107 31166..31248 + |
| 1681462547.9869213-CDS-Ecto-sp13_S_contig107:33312..33373 | 1681462547.9869213-CDS-Ecto-sp13_S_contig107:33312..33373 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig107 33313..33373 + |
| 1681462548.0223832-CDS-Ecto-sp13_S_contig107:33645..33741 | 1681462548.0223832-CDS-Ecto-sp13_S_contig107:33645..33741 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig107 33646..33741 + |
| 1681462548.0404224-CDS-Ecto-sp13_S_contig107:34439..34615 | 1681462548.0404224-CDS-Ecto-sp13_S_contig107:34439..34615 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig107 34440..34615 + |
| 1681462548.0517354-CDS-Ecto-sp13_S_contig107:35966..37404 | 1681462548.0517354-CDS-Ecto-sp13_S_contig107:35966..37404 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig107 35967..37404 + |
| 1681462548.0699868-CDS-Ecto-sp13_S_contig107:38090..38657 | 1681462548.0699868-CDS-Ecto-sp13_S_contig107:38090..38657 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig107 38091..38657 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig107.643.1 >prot_Ecto-sp13_S_contig107.643.1 ID=prot_Ecto-sp13_S_contig107.643.1|Name=mRNA_Ecto-sp13_S_contig107.643.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=863bp
MDGGASSTDAFRMPAEGEELTTPFSEFVVRYGHTPRLVRNMAAMAGVAAE
LPPRMEEPYRLVYFVVTDQMRTTIAALRAVLKEGLQAPLRTPTAFIIDEL
HTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSEMYIRSFWELRGFEEE
TSPEVLRACSLDLDDGFNTGASTTLLRAGAAYTEYQPANDERLSMRTLAA
RGLLAIPSSGSRDSLVDLTGGSRSLAEQDEEQMQLAIAMSLSAAAAEATC
GGGGDAAAAAAIARSDGARHDGAVRGGEGETSAGDDTETEEDADYGGQLS
GGDADAAAGGIASTAAAAAAAAAAPTSSSARSPVRAGEEHGAGGGDGSGC
GGGGGGWGRRTGGVVEDGRGRDSDNDGVTRRLRRRRDESGSSTPGEPSPC
GADGAASVGMELGGVGAGRHGNEGRRSSSRDGGDGGNTASLTENVCITAA
RDVGSGLAVASETTAPHAPRPLDAAAAAAREGSSNRPSSLPPSRPASPCP
SSASSCSFTLGPAPSRSRTSTWNQQIPTTVGALGHRDPNSAMTVSKENDP
HHHHHQDQARKAVYQPPPRGLGTRGQQHQHQATFAGDGGGMIGALGGVVY
PTTTAGGTGGADVAGLGAGRFGNVGVGGSGGGLISDGIEPSDVVMRDFGV
GSDGLDGGGRLDDKLIAVAGWEGDDDDEELRRVMEASRLSHEEEMIQRAT
QESQQAAAAAAAAAAAEHLPQPPCNTAAAAAPPPPPSSLPPLSRKGVAAT
TPTGGGPDVAVLPSFGSLEARNSTGVSVGAGVHRHGSDASGAALPSTCGG
AAAAAAASSGGFRAGTSGGAADSAAAAAAGAGSQAPAWLGGWEDGEAVSF
TGKGKGKGRCRD* back to topmRNA from alignment at Ecto-sp13_S_contig107:30713..38657+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig107.643.1 ID=mRNA_Ecto-sp13_S_contig107.643.1|Name=mRNA_Ecto-sp13_S_contig107.643.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7945bp|location=Sequence derived from alignment at Ecto-sp13_S_contig107:30713..38657+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGTGTGTGTGTTTTGTGTGCTTCTCGTCGACGGTGGTGAACACAGCCGT
CCAGAGTAGCCCTTTGGCCACCACCCGTGTTATCAAAGATGGACGGTGGC
GCCTCCTCAACGGACGCCTTTCGCATGCCGGCGGAAGGGGAGGAGCTCAC
CACCCCCTTTTCGGAGTTTGTTGTTCGTTATGGACACACCCCCAGGCTAG
TGAGGAACATGGCAGCGATGGCAGGGGTCGCTGCAGAGCTTCCCCCGCGA
ATGGAGGTATGTGTCCTGTTGGCGAAGCAATGTGCAGCTGGTGGGTTCTC
ATTGTGTTGCTTTCAATAATTATTTTACGCGCGCCACCGGACTTTGCGGG
AGGAACATCGCACGCAGCACCGCTGCGGCAACCTGGCTGTTTATTTGTCT
TTGCCATCCTCTCTCTCAAGCGTCGCCCGTTCTCTTCCTACCCGTGGCGA
CAGGAGCCGTACCGACTGGTATATTTCGTGGTGACGGATCAGATGCGGAC
AACTATTGCCGCTCTACGAGCTGTCCTGAAAGAGGGGTGAGCACAGTCAT
GTGTTCGGTTCGCGTAGAGCAGATACTATCAACTACACCGTCCAAGCAGC
CGGCTTACAGGGAAAGAGAGATGTCACTCAAACGTACGAACATGTCCAGA
GTGGTAGCTCAGAGTGAAGCACGCCTGATTTGGTTTGATGTCCCAGTCTC
GACCCCAGGGACGGGTCTTAGTACCAATGCCTTGCACTCTCATGCATGGC
AACGCGCGGTCGGCTGAGGATGAAGGTTCTGTCTCTCTGCTGGTTGGTGA
ACATGCTCCCATTCGAACGCTGGGGGCTCGCGAAAAGAAAGAACGCCAGC
GACATGATCACCGCATATTTTTGAAACGTGGTTCTTTGAGGAAGAAGATT
TCACCACATGTGCGGAGGGATGCACACCTAGAGCAGTCACAAGAGAGAGA
AGAAAGACTACCCGCGTTAGAGATGAACCCACCCACCGGCGGTGAAAAGT
ATATCCCTCTGTCCCGGTGCGTCTTCTCCGTATTGGTCTGCCAAATAGTT
TAGATTATCCGCATATCATGTCCCACAACGCACATGTTTTGGCGCTTATT
CGCGGCGGCCGAAAATGTTGTTTTCCGGCGGGCCGAGTCGCCGCGCTTCT
TCCAATGCCCCCGCCTGAAAGCACTTGTAGCTAAACTTTATCTTGCGTAC
CACCCTTAGATACTGTACCAAGAATACAACACATGACCAGTCCGCCTCTG
TCCCCCTCCCGAAGCAAGACCTGTGTACAGCAGCAGTACTCTGCAACGGC
ACGCACAGCTGAAGCATACCGAATGCATGCATGCACGTGCAGACAACGGA
GTAACAGCATTCCCCCGACAATTGACACACATTCACGTGCCTTTTCCTTC
CAGAGCGGCCACAAGGTATTTCAACATTTCAACCCCGCAGCATTTTTTTT
TGTGCCTTTGCACTAGATTTAGATTTGTGTGCATACCTCCCTGTTACTTT
GAAACCAACTCTCTGCCGTTCAGAACATACCGTCCGCGCATGTGCACGCC
CCCCTGCTGTCCATGCCAAATTTCGTTGCGGTGATCATTTTCCTTGAGGA
GGAGGAGGAGGAGGAGATTGTCTTTGTTTGTGTCCGCCGCCGGCGACAGC
GATGGTGGTCTTGCCGCGTGCGTTCGGCAAGCGACAGAAAATAATGTTGA
GAACCTTTTTCATTCAGCTGCAGTTCATAGCTGCCGAGCTTTCTTTCGCT
CCATCAGCTGCCGCTTGGGTCCACCCACTACTACGTACATGGGCAGAGGT
TGGTCTTGGGGGAAAATATTTCCACGATATCGCACGAACGGTGCTGTTGT
GTTGGTCATGATTTTGTGGTTGTTGATGTGTGCCACCATGCCATGATGCC
GGCCTGTGTTGACATAAACGTTGAACATGGAATTTCTCCGCGTTGCTACT
TGCGTCAACGCCGGAATTCGTCGGTTGCGGCACGTGGTCGCGGTCTTCAT
ATCCAGCAGGTTCCACAGGCTTTTTGCCCGCAAGCTTCACGAAAATTGCT
TTCACCCCGCTCACGCGGATGGATGGAGAGCAACCGTTTTGACTCCCGAC
ACTTCGATACATCTACAAAGCGGTTATGTATACAACGAAAAGGCTGCAGT
GCCCCCCCAATAGCCCAAACTTTAGATCCACATACGATACAACCCTTCGA
GTGTTTTTCTTGTGTTTCTTTCTGGAGATTGAGGCCGCCATGGGCACTAA
CCATCGCCCCCCATGCCCTCCTCAACACAAGATACCCAAAAGAATAATGT
CGCAGCACGCTCTCGCCCCAAAAACCAGACGTAAAAACAACGGCTGTGTT
GCGATTTATCCACGTGCTCGTGTAGTTGTTGCAGGCGCGACTCGTGGAAT
GCCCCTCATCTGCCTCTTTATCCGGGAAACCTTACGGGGGCATTGCCTGG
TCGTGTTCTTCTTCGTATCGGCTTGCCCCCGTGAATGATGTACGTAACGA
CTGTCTTCCTTACCGTCATCTTGCGCCATTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTGCGTTGGTTGTCCCACTGCCGTCTCTGTGCCCTTTTTTGCAG
GCTCCAAGCTCCGTTGCGGACGCCGACGGCCTTTATCATCGATGAGCTAC
ACACGCTGGAGGTACGCCATACAACACCGCGGTCTTCCGTGCTGCGCCGC
GTTTAGAGATTTTGCCGCGGTCTTGATCAATCTGGAACGAACCCGGTCGT
TTCGCGTTCAACAGGGGTATAAACCAGCCGTCGCTCGTGTTTTGCTTTTT
GTCGCCACCTCTGCACGTACCGCACTCTACTCCATAACGTTGTAACAAAC
AACTTAAATCAGTACCAGGTTCGCTGTCGCTGAACCCCCACCTCGCTGCG
TTGATCTGGCGGGTCTCTCTCGGCCATGGACAGGTTTTTCGGAAGCAGGG
GCTCGCGACAAGCTTAACCAATTTCGTCAAGGGCATCGCCGAGGCCCACG
GGGTGGAATTATTTGTCAGCTCTGAAATGGTGAGGAATCAGGGACTAATG
GCGCGGCGGATGATAAAGTCCGAAGTTGGCGCATCATGAGCTTAAGCATC
CTTTTGGCCCATAACAACGATGCGGACGTACCCCTTTCATGACGGGGCAC
GGTCCCTGATTTGGCGTTTGGACATTTGGGCATCTGGGTTGGCCGGGGAA
GTAAGGTCTCGATCCCACCTTTGATTGTAGTAGCCGCTGAGGCTCCCCTC
GTGCGGCTACCCCTTCCTTGATTATGCCGCTTTGACTTGTGCGCGTGGGG
GTCATCACCTCCCGCCCCCGCCCCCCCGCTTGTTTCTTCCGCTGTAATAA
CTCCGTTTCTCGGCTCACCCCCCATCCCTCTATTGGTGAGATGTGACAGC
TCAGGAAGTCGGTAGTACCACCGGCCCTGCTCTAGGAATTCTTTTTTCAA
AGGCCAGCGAAGGCGGTTTTTCTCGTGATGCCGGTCAATGCTTTAACGAC
TACGGCGTGCGTTTACATGAGCAAGCGTACCCGCCCCCTCGCCCACTTTC
CACTCCGTCCTCTGAATGTCGCGTGGTTAAGCAACTATGGCTGCAAAACA
TGAGCACCCCCCCACCACCCAACCTCTCTCCTGTTGTCTTCTTTCTCTCC
GGGCGCTACATGCCCCCCCACATTCCCCTGCCTAACCACTTTTTTTTTTT
TGATGGCGTAATTTTCCTACAACGCAGTACATACGGAGCTTCTGGGAGCT
CCGAGGGTTCGAAGAGGAAACCTCTCCGGAGGTGCTTCGAGCGTGCAGCC
TCGACCTCGACGACGGGTTCAACACCGGCGCCTCCACCACCCTGCTGCGA
GCGGGCGCGGCGTACACGGAGTACCAGCCGGCGAACGATGAGCGACTGAG
CATGTGAGTGAGGTCGCAGCCACCTCTTTTTCCTAACGTCCCACGCTCCT
CTTCGGCGCCGTATGGGGGACGAGGACTTGTCTGGCGGTTTTCGTCAGTG
TCTTTGTGGTGTCCGTGGTCGTTGCCGTTGCTGTTGCCGTTGTCGTTGCC
GGTGTCGTTACCGTTGCCTTCGCATTGATCGTCCCCTTACCCCTGGGAAG
AAAGGACGCTTATTTTGCTCGCCGTGCCGTGAGTAATGTGAAATGCAAGG
AGTGTCCTTTTTGTCGTGTCCGGGCGGCCGCAGGCGATGGATGGACCCTT
CCCGGACGTTCTCTTTCTGTCCTTGTTGGTGCTGTCTGGTCGCACGGCAC
GGAGGCAAGGCCGTGTGCACTGCGGTTCTTCTACACAAACGCGCTTCCTC
TCGCTCACCTCTGCGTGAGCATTGGGTTTTGGGAGGTCGTGTGTTTGTGA
TCACGAAGATTTGTGTGTCGTCCCTTGACTCGTTACCTGGTGCGCGCTTC
TTGTCTGCCATGTTGACTATACCGCCGCCCCTCCCCGCTCATGTGCGCTT
TCATGTTCCTTACCTTGGGGGTGTGTACTTGGATTTTACCAGCACCCGGC
CTTTCTACCACGGCGGAGACGGCTACCTGGCGGCGGCGACGGCGGCGGCT
GACGCCCCTACCCTCGCTGGCTCAGCAGCCTTCATGGGCCAGGGGGGCGC
AGGACTGGAGTCGTCTGGATACGGCGAAGGTATCGGTGCTTCCGCTGCTG
CTGGTGGTGCCGTGTCTGGCGGTGCCTCTGCTGCCGCCGATGTGGCCGGC
GATCACAACCGCGTTACGGGCGGGGATGGTGGCGGCGGTGCCGGTGGCGC
CGACGGCGAGACCGTGCTTCCTCCCTCCTCACGCTTGCTGACCAACGAGC
GCCTGGCGCGGCACGACGAGGAGGAGCAGGCCAAGGGCCTCGCGTCGCCG
TGGGGCACGCTGGTGCAGTCGTCGAAGACAGCGGAGGCCACGATGCTCTC
GACCGCCGGCGACACAGCGGCGGCCAAGGCGGCGCTGGCCACCGCCGCCG
CAACAGCGGCGACGCAGGACCCGTCCGCTGCGGTACAACACACCGCGGCC
GGCGGCGGGTGGCCGGGGGCGGGGCCGGGGGCGGGGCCGGGGGGAGCGGC
GGAGCTGCCACCTTCTCCGCCGTCGCCGCCGATCGGCACGGCGGCGGGAC
CGGCGGCGGCGGCGGCGCTGGCGGCGACGTCTTCGAGCGGCGTCGGCGCG
ACGGTGGCGGGGATGCTGGGGTGGACCCCTTCCGACCGGCAAATTGTTGC
CGCGACGGGCGGGACCGCCTCCGGCGGCGGCGGCGGCGGCGGCATCGTCG
ACAGGAGGACGCTGGCGGCGAGGGGGCTCCTAGCGATCCCGTCGTCCGGG
AGCAGGGACAGCTTGGTCGACCTCACCGGCGGGAGCAGGAGCCTGGCGGA
GCAGGACGAGGAGCAGATGCAACTGGCCATCGCGATGTCGCTGTCGGCGG
CAGCTGCTGAGGCTACCTGCGGTGGTGGTGGCGACGCTGCTGCGGCGGCA
GCGATAGCGAGGAGCGATGGCGCGAGGCACGACGGGGCGGTGCGCGGCGG
GGAAGGAGAGACCTCCGCGGGAGACGACACGGAGACGGAGGAAGACGCCG
ACTACGGCGGGCAGCTCTCGGGCGGGGACGCGGACGCTGCCGCCGGCGGC
ATTGCTTCAACAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCCCGACAAG
TAGTAGTGCTAGGTCTCCGGTGAGGGCCGGAGAGGAACACGGCGCCGGTG
GCGGCGATGGCTCGGGGTGCGGCGGCGGAGGCGGCGGGTGGGGCAGGCGG
ACGGGAGGGGTAGTGGAAGACGGTCGCGGTCGCGACAGCGACAACGATGG
CGTTACACGACGGCTACGGAGACGGAGGGACGAGAGCGGGTCCAGCACGC
CGGGAGAGCCGTCACCCTGCGGCGCTGACGGAGCGGCGTCGGTTGGGATG
GAGCTGGGCGGTGTGGGAGCGGGGCGTCACGGGAACGAGGGGCGCAGGAG
CAGTAGCCGCGATGGCGGCGACGGCGGCAACACCGCATCGTTGACGGAGA
ATGTGTGCATCACTGCCGCGAGGGACGTTGGTAGCGGGCTCGCTGTGGCG
TCGGAGACAACGGCCCCGCACGCGCCCCGCCCACTCGACGCGGCGGCGGC
AGCGGCGCGAGAGGGAAGCAGCAACCGCCCCTCCTCTCTTCCTCCCTCCC
GTCCCGCCTCTCCGTGCCCCTCGTCCGCTTCGTCGTGCTCCTTTACCCTG
GGGCCCGCTCCGTCCCGATCCCGCACTTCCACCTGGAACCAACAAATCCC
AACCACGGTCGGGGCGCTAGGGCACCGTGACCCCAACAGCGCGATGACGG
TATCCAAGGAGAATGATCCCCACCACCACCACCACCAGGATCAGGCTAGG
AAGGCCGTGTATCAGCCCCCGCCTAGGGGGCTCGGGACACGAGGCCAACA
GCATCAGCACCAGGCTACCTTTGCGGGGGACGGCGGCGGCATGATCGGCG
CCTTGGGCGGGGTCGTTTACCCCACTACGACCGCTGGCGGTACCGGTGGT
GCCGACGTTGCGGGGTTGGGGGCGGGACGGTTTGGGAACGTCGGGGTTGG
TGGTAGCGGTGGAGGCTTGATCAGCGATGGCATCGAGCCTAGCGACGTGG
TGATGAGGGATTTCGGTGTGGGGTCCGACGGACTGGATGGAGGCGGCCGG
TTGGATGACAAGCTAATCGCCGTGGCGGGGTGGGAGGGAGATGTGAGCCT
TTCTCGGGTGCTTTGGGGGTTCTGCCCGCGTGTCGAGCGTCCCGTTTTTT
TTTCTTAATGAAAGGGCCGCGTGAATGAAAAAAACAGATAGCCGCTTTGT
TTACGGTGCTTGACTCGCCACCCACACCCTGATAACCCTGATAGTTTTGT
GTCACCGTTGCGTGCGATTATTTTGAGTAGACTAGATCGACTTTCCTTCG
TCCGTGTTGCTTCCTGCTCTGGTCGCGCTGCGTGTGCCTGCCATTTTTAC
GTTTTTGTTTCGCTCGTTTGTAATCTAGTCTTCGTCTGTTTTGCTGATGC
CCTTTTTGTCAGTTGGGCGTGCTGTAGCTTAGTTAATTAACCCCACTGAC
CGTTTCTTGGCGACATTGGTTGGCATCTGACGGCAACATCGTCTATCTCG
TCGCGCGTGTGGGAAACAGCTCTTTCGGGAGGTCATATTGCATCCCCAAA
CCTGAAAGATAATAAAAATACCCAAAACAAAACAAGCAACACCCCCAAAC
CAAATACATTGTTCCAAGCCTTTGTTGAACTCTCATCTTATCAGATGCAG
AGTTACAGCTTGCCCCCGCGGGGAGCGAGCACCACGCACTCTGCGCATGC
AGGATTCCCCTGCCCCTGATTTTTACTCTCCTGACGAGATTTTTTGTTTC
TTTTTTGCGTGTGTGCTCTTGTCGTCAGGACGACGACGAGGAGCTACGGC
GGGTCATGGAGGCCAGCAGGTTGTCCCACGAGGAGGAAATGATCCAGAGG
GCCACGCAGGAGAGCCAACAGGCAGCGGCAGCGGCAGCGGCAGCGGCGGC
AGCGGAGCACCTCCCACAACCCCCATGCAACACGGCGGCGGCGGCGGCGC
CGCCGCCGCCGCCGTCCTCGTTGCCGCCGCTTTCGCGAAAAGGGGTCGCC
GCTACAACCCCGACCGGCGGCGGGCCCGACGTCGCCGTGTTGCCGTCGTT
CGGTTCCCTCGAAGCGCGGAATAGCACCGGTGTTAGTGTCGGTGCCGGCG
TTCACAGGCATGGGAGCGACGCTAGCGGCGCCGCGTTGCCGAGCACCTGC
GGGGGGGCGGCGGCGGCGGCGGCGGCTAGCTCCGGCGGCTTTCGAGCGGG
GACGAGCGGAGGCGCCGCCGACAGCGCAGCGGCGGCGGCGGCGGGGGCGG
GGTCCCAGGCGCCTGCGTGGTTGGGGGGGTGGGAGGACGGCGAAGCGGTG
TCGTTCACGGGCAAGGGGAAGGGGAAAGGGCGTTGCAGAGACTGA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig107:30713..38657+ >mRNA_Ecto-sp13_S_contig107.643.1 ID=mRNA_Ecto-sp13_S_contig107.643.1|Name=mRNA_Ecto-sp13_S_contig107.643.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2589bp|location=Sequence derived from alignment at Ecto-sp13_S_contig107:30713..38657+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGGTGGCGCCTCCTCAACGGACGCCTTTCGCATGCCGGCGGAAGG
GGAGGAGCTCACCACCCCCTTTTCGGAGTTTGTTGTTCGTTATGGACACA
CCCCCAGGCTAGTGAGGAACATGGCAGCGATGGCAGGGGTCGCTGCAGAG
CTTCCCCCGCGAATGGAGGAGCCGTACCGACTGGTATATTTCGTGGTGAC
GGATCAGATGCGGACAACTATTGCCGCTCTACGAGCTGTCCTGAAAGAGG
GGCTCCAAGCTCCGTTGCGGACGCCGACGGCCTTTATCATCGATGAGCTA
CACACGCTGGAGGTTTTTCGGAAGCAGGGGCTCGCGACAAGCTTAACCAA
TTTCGTCAAGGGCATCGCCGAGGCCCACGGGGTGGAATTATTTGTCAGCT
CTGAAATGTACATACGGAGCTTCTGGGAGCTCCGAGGGTTCGAAGAGGAA
ACCTCTCCGGAGGTGCTTCGAGCGTGCAGCCTCGACCTCGACGACGGGTT
CAACACCGGCGCCTCCACCACCCTGCTGCGAGCGGGCGCGGCGTACACGG
AGTACCAGCCGGCGAACGATGAGCGACTGAGCATGAGGACGCTGGCGGCG
AGGGGGCTCCTAGCGATCCCGTCGTCCGGGAGCAGGGACAGCTTGGTCGA
CCTCACCGGCGGGAGCAGGAGCCTGGCGGAGCAGGACGAGGAGCAGATGC
AACTGGCCATCGCGATGTCGCTGTCGGCGGCAGCTGCTGAGGCTACCTGC
GGTGGTGGTGGCGACGCTGCTGCGGCGGCAGCGATAGCGAGGAGCGATGG
CGCGAGGCACGACGGGGCGGTGCGCGGCGGGGAAGGAGAGACCTCCGCGG
GAGACGACACGGAGACGGAGGAAGACGCCGACTACGGCGGGCAGCTCTCG
GGCGGGGACGCGGACGCTGCCGCCGGCGGCATTGCTTCAACAGCGGCGGC
GGCGGCGGCGGCGGCGGCGGCCCCGACAAGTAGTAGTGCTAGGTCTCCGG
TGAGGGCCGGAGAGGAACACGGCGCCGGTGGCGGCGATGGCTCGGGGTGC
GGCGGCGGAGGCGGCGGGTGGGGCAGGCGGACGGGAGGGGTAGTGGAAGA
CGGTCGCGGTCGCGACAGCGACAACGATGGCGTTACACGACGGCTACGGA
GACGGAGGGACGAGAGCGGGTCCAGCACGCCGGGAGAGCCGTCACCCTGC
GGCGCTGACGGAGCGGCGTCGGTTGGGATGGAGCTGGGCGGTGTGGGAGC
GGGGCGTCACGGGAACGAGGGGCGCAGGAGCAGTAGCCGCGATGGCGGCG
ACGGCGGCAACACCGCATCGTTGACGGAGAATGTGTGCATCACTGCCGCG
AGGGACGTTGGTAGCGGGCTCGCTGTGGCGTCGGAGACAACGGCCCCGCA
CGCGCCCCGCCCACTCGACGCGGCGGCGGCAGCGGCGCGAGAGGGAAGCA
GCAACCGCCCCTCCTCTCTTCCTCCCTCCCGTCCCGCCTCTCCGTGCCCC
TCGTCCGCTTCGTCGTGCTCCTTTACCCTGGGGCCCGCTCCGTCCCGATC
CCGCACTTCCACCTGGAACCAACAAATCCCAACCACGGTCGGGGCGCTAG
GGCACCGTGACCCCAACAGCGCGATGACGGTATCCAAGGAGAATGATCCC
CACCACCACCACCACCAGGATCAGGCTAGGAAGGCCGTGTATCAGCCCCC
GCCTAGGGGGCTCGGGACACGAGGCCAACAGCATCAGCACCAGGCTACCT
TTGCGGGGGACGGCGGCGGCATGATCGGCGCCTTGGGCGGGGTCGTTTAC
CCCACTACGACCGCTGGCGGTACCGGTGGTGCCGACGTTGCGGGGTTGGG
GGCGGGACGGTTTGGGAACGTCGGGGTTGGTGGTAGCGGTGGAGGCTTGA
TCAGCGATGGCATCGAGCCTAGCGACGTGGTGATGAGGGATTTCGGTGTG
GGGTCCGACGGACTGGATGGAGGCGGCCGGTTGGATGACAAGCTAATCGC
CGTGGCGGGGTGGGAGGGAGATGACGACGACGAGGAGCTACGGCGGGTCA
TGGAGGCCAGCAGGTTGTCCCACGAGGAGGAAATGATCCAGAGGGCCACG
CAGGAGAGCCAACAGGCAGCGGCAGCGGCAGCGGCAGCGGCGGCAGCGGA
GCACCTCCCACAACCCCCATGCAACACGGCGGCGGCGGCGGCGCCGCCGC
CGCCGCCGTCCTCGTTGCCGCCGCTTTCGCGAAAAGGGGTCGCCGCTACA
ACCCCGACCGGCGGCGGGCCCGACGTCGCCGTGTTGCCGTCGTTCGGTTC
CCTCGAAGCGCGGAATAGCACCGGTGTTAGTGTCGGTGCCGGCGTTCACA
GGCATGGGAGCGACGCTAGCGGCGCCGCGTTGCCGAGCACCTGCGGGGGG
GCGGCGGCGGCGGCGGCGGCTAGCTCCGGCGGCTTTCGAGCGGGGACGAG
CGGAGGCGCCGCCGACAGCGCAGCGGCGGCGGCGGCGGGGGCGGGGTCCC
AGGCGCCTGCGTGGTTGGGGGGGTGGGAGGACGGCGAAGCGGTGTCGTTC
ACGGGCAAGGGGAAGGGGAAAGGGCGTTGCAGAGACTGA back to top
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