prot_Ecto-sp13_S_contig107.643.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig107.643.1
Unique Nameprot_Ecto-sp13_S_contig107.643.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length863
Homology
BLAST of mRNA_Ecto-sp13_S_contig107.643.1 vs. uniprot
Match: A0A6H5JC87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC87_9PHAE)

HSP 1 Score: 907 bits (2345), Expect = 2.290e-316
Identity = 705/1117 (63.12%), Postives = 716/1117 (64.10%), Query Frame = 0
Query:    1 MDGGASSTDAFRMPAEGEELTTPFSEFVVRYGHTPRLVRNMAAMAGVAAELPPRMEEPYRLVYFVVTDQMRTTIAALRAVLKEGLQAPLRTPTAFIIDELHTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSEMYIRSFWELRGFEEETSPEVLRACSLDLDDGFNTGASTTLLRAGAAYTEYQPANDERLSM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RTLAARGLLAIPSSGSRDSLVDLTGGSRSLAEQDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIARSDGARHDGAVRGGEGETSAGDDTETEEDADYGGQLSGXDADAXXGGIASTAAXXXXXXXXXXXXXXRSPVRAGEEHGAXXXXXXXXXXXXXXXGRRTGGVVEDGRGRDSDNDGVTRRLRRRRDESGSSTPGEPSPCGADGAASVGMELGGVGAGRHGNEGRRSSSRDGGDGGNTASLTENVCITAARDVGSGLAVASETTAPHAPRPLDAAAAAAREGSSNRPSSLPPSRPASPCPSSASSCSFTLGPAPSRSRTSTWNQQIPTTVGALGHRDPNSAMTVSKENDPHXXXXXXX--ARKAVYQPPPRGLGTRGQQHQHQATFAGDGGGMIGALGGVVYPTTTAGXXXXXXXXXXXXXXXXXXXXXXXXXGLISDGIEPSDVVMRDFGVGSDGLDGGGRLDDKLIAVAGWEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRKGVAATTPTGGGPDVAVLPSFGSLEARNSTGVSVGAGVHRHGSDASGAALPSTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-AGSQAPAWLGGWEDGEAVSFTGKGKGKGRCRD 862
            MDGGASSTDAFRMPAEGEELTTPFSEFVVRYGHTPRLVRN AA+AGVAAELPPRMEEPYRLVYFVVTDQMRTTIA LRAVLKEGLQAPLRTPTAFIIDELHTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSE+YIRSFWELRGFEEETSPEVLRAC+LDLDDG NTGASTTLLRAGAAYTEYQPANDERLS+                                                                                                                                                                                                                                                            RTLAARGLLAIPSSGSRD +VDLT  SRSLAEQD  XXXXXXXXXXXXXXXXX             I RSD ARHD AVRGGEGETS             GGQLSGXDADA  GGIASTAAXXXXXXXXXX    RS VRAG E GAXXXXXXXXXXXXXXX RR GGVVEDGR       GV+RRLRRRRDESGSSTPGEPSPCGADGAASVGMELGGVGAGR GNEGRRSSSRDGGD GNTA LTENVCITAARDVGSGL VASE  APHAPRPLDAAAAAAREGSSNRPSSLPPSRPASPCPSSASSCSFTLGP PSRSRT TWNQQ PTTVGA GHRDPNSAMTVSKENDPH         ARKAVYQPPP GLG R +QHQHQA FAGDGGGMIGALGGVVYPTTTAG                         GL SDGIEP+DV+MRDFGVG+DGLDG GRLDDKLIAVAGWEGD                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            GGGPDVAVLPSFGSLEAR STGV VGAGVH HGSDA GA LPSTCGG  XXXXXXXXXXXXXXXXXXXXXXXXXXX  AG+QAPAWLGGWEDGEAVSFTGKGKGKGRCRD
Sbjct:    1 MDGGASSTDAFRMPAEGEELTTPFSEFVVRYGHTPRLVRNTAAIAGVAAELPPRMEEPYRLVYFVVTDQMRTTIATLRAVLKEGLQAPLRTPTAFIIDELHTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSELYIRSFWELRGFEEETSPEVLRACNLDLDDGSNTGASTTLLRAGAAYTEYQPANDERLSITRPFYHGGDGYLTAAGAXXXXXXXXXPTLAGSAAFMGQGRTGMESSGYGEGIGASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGETVLPPSSRLLTNERLAQHNEEEKAKGLALPWGTLEQSSKTAEASMLSAAGDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVGATVAGMLGWTPSDRQIVAATCGTASGGGGIVDRRTLAARGLLAIPSSGSRDGVVDLTCRSRSLAEQDXXXXXXXXXXXXXXXXXXXSCRGGGDAAAATAIERSDDARHDEAVRGGEGETSXXXXXXXXXXXXXGGQLSGXDADAAGGGIASTAAXXXXXXXXXXA---RSQVRAGVERGAXXXXXXXXXXXXXXXXRRAGGVVEDGRXXXXXXXGVSRRLRRRRDESGSSTPGEPSPCGADGAASVGMELGGVGAGRDGNEGRRSSSRDGGDDGNTALLTENVCITAARDVGSGLGVASEIAAPHAPRPLDAAAAAAREGSSNRPSSLPPSRPASPCPSSASSCSFTLGPVPSRSRTCTWNQQQPTTVGAPGHRDPNSAMTVSKENDPHHDRHLHQDQARKAVYQPPPMGLGARCRQHQHQAAFAGDGGGMIGALGGVVYPTTTAGGGSGADVPGFGAGRFGNVGVGGGGGGLTSDGIEPNDVMMRDFGVGADGLDGVGRLDDKLIAVAGWEGDDNDEELRLVMEASRQSHEEEMIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------NGGGPDVAVLPSFGSLEARKSTGVGVGAGVHGHGSDAGGAVLPSTCGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGAQAPAWLGGWEDGEAVSFTGKGKGKGRCRD 1107          
BLAST of mRNA_Ecto-sp13_S_contig107.643.1 vs. uniprot
Match: D7G1U4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U4_ECTSI)

HSP 1 Score: 530 bits (1366), Expect = 5.120e-176
Identity = 492/799 (61.58%), Postives = 499/799 (62.45%), Query Frame = 0
Query:   55 MEEPYRLVYFVVTDQMRTTIAALRAVLKEGLQAPLRTPTAFIIDELHTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSEMYIRSFWELRGFEEETSPEVLRACSLDLDDGFNTGASTTLLRAGAAYTEYQPANDERLSMRTLAARGLLAIPSSGSRDSLVDLTGGSRSLAEQDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIARSDGARHDGAVRGGEGETSAGDDTETEEDADYGGQLSGXDADAXXGGIASTAAXXXXXXXXXXXXXXRSPVRAGEEHGAXXXXXXXXXXXXXXXGRRTGGVVEDGRGRDSDNDGVTRRLRRRRDESGSSTPGEPSPCGADGAASVGMELGGVGAGRHGNEGRRSSSRDGGDGGNTASLTENVCITAARDVGSGLAVASETTAPHAPRPLDAAAAAAREGSSNRPSSLPPSRPASPCPSSASSCSFTLGPAPSRSRTSTWNQQIPTTVGALGHRDPNSAMTVSKENDPHXXXXXXX--ARKAVYQPPPRGLGTRGQQHQHQATFAGDGGGMIGALGGVVYPTTTAGXXXXXXXXXXXXXXXXXXXXXXXXXGLISDGIEPSDVVMRDFGVGSDGLDGGGRLDDKLIAVAGWEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRKGVAATTPTGGGPDVAVLPSFGSLEARNSTGVSVGAGVHRHGSDASGAALPSTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGSQAPAWLGGWEDGEAVSFT 851
            MEEPYRLVYFVVTDQMRTTIAALRAVLKEGLQAPLRTPTAFIIDELHTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSE+YIRSFWELRGFEEETSPEVLRACSLDLDDGF TGA+TTLLRAGAAYTEYQPANDERLSMRTLAARGLLAIPSSGSRD +VDLTGGSRSLAEQDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I RSDGARHDGAVR                          X ADA XGGIAS+  XXXXXXXXXXXX                                                                                                                                                                                                      PTTVGALGHRDPN AMT SKENDP XXXXXXX   RKAVYQPPPRGLG RGQQHQHQA FAGDGGGMIGALGGVVY  TTAG                     XXX GLISDGIEPSDV+MRDFGVG+DGLDGGGRLDDKLIAVAGWEGD               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LSRKGVAA TP GGGPDVAVLPSFGSL AR STGV        HGSDASGAALPSTCGG XXXXXXXXXXXXXXXXXXXXXXXXXX    G+QAPAWLGGWEDGEAVSFT
Sbjct:    1 MEEPYRLVYFVVTDQMRTTIAALRAVLKEGLQAPLRTPTAFIIDELHTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSELYIRSFWELRGFEEETSPEVLRACSLDLDDGFKTGAATTLLRAGAAYTEYQPANDERLSMRTLAARGLLAIPSSGSRDGVVDLTGGSRSLAEQDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIERSDGARHDGAVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXADAAXGGIASSXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XPTTVGALGHRDPNRAMTASKENDPXXXXXXXXDHGRKAVYQPPPRGLGARGQQHQHQAAFAGDGGGMIGALGGVVYSPTTAGGTGGADVPGLGAGRFGNVGVGXXXGGLISDGIEPSDVIMRDFGVGADGLDGGGRLDDKLIAVAGWEGDDNDEELRRVMEASRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----LSRKGVAAATPNGGGPDVAVLPSFGSLGARESTGVGXXXXXXGHGSDASGAALPSTCGGAXXXXXXXXXXXXXXXXXXXXXXXXXX----GAQAPAWLGGWEDGEAVSFT 594          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig107.643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JC87_9PHAE2.290e-31663.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1U4_ECTSI5.120e-17661.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 689..709
IPR003903Ubiquitin interacting motifSMARTSM00726uimcoord: 228..247
e-value: 14.0
score: 14.6
coord: 691..710
e-value: 3.0
score: 16.8
IPR003903Ubiquitin interacting motifPROSITEPS50330UIMcoord: 228..247
score: 9.232
IPR003903Ubiquitin interacting motifPROSITEPS50330UIMcoord: 675..694
score: 8.558

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig107contigEcto-sp13_S_contig107:30801..38657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig107.643.1mRNA_Ecto-sp13_S_contig107.643.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig107 30713..38657 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig107.643.1 ID=prot_Ecto-sp13_S_contig107.643.1|Name=mRNA_Ecto-sp13_S_contig107.643.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=863bp
MDGGASSTDAFRMPAEGEELTTPFSEFVVRYGHTPRLVRNMAAMAGVAAE
LPPRMEEPYRLVYFVVTDQMRTTIAALRAVLKEGLQAPLRTPTAFIIDEL
HTLEVFRKQGLATSLTNFVKGIAEAHGVELFVSSEMYIRSFWELRGFEEE
TSPEVLRACSLDLDDGFNTGASTTLLRAGAAYTEYQPANDERLSMRTLAA
RGLLAIPSSGSRDSLVDLTGGSRSLAEQDEEQMQLAIAMSLSAAAAEATC
GGGGDAAAAAAIARSDGARHDGAVRGGEGETSAGDDTETEEDADYGGQLS
GGDADAAAGGIASTAAAAAAAAAAPTSSSARSPVRAGEEHGAGGGDGSGC
GGGGGGWGRRTGGVVEDGRGRDSDNDGVTRRLRRRRDESGSSTPGEPSPC
GADGAASVGMELGGVGAGRHGNEGRRSSSRDGGDGGNTASLTENVCITAA
RDVGSGLAVASETTAPHAPRPLDAAAAAAREGSSNRPSSLPPSRPASPCP
SSASSCSFTLGPAPSRSRTSTWNQQIPTTVGALGHRDPNSAMTVSKENDP
HHHHHQDQARKAVYQPPPRGLGTRGQQHQHQATFAGDGGGMIGALGGVVY
PTTTAGGTGGADVAGLGAGRFGNVGVGGSGGGLISDGIEPSDVVMRDFGV
GSDGLDGGGRLDDKLIAVAGWEGDDDDEELRRVMEASRLSHEEEMIQRAT
QESQQAAAAAAAAAAAEHLPQPPCNTAAAAAPPPPPSSLPPLSRKGVAAT
TPTGGGPDVAVLPSFGSLEARNSTGVSVGAGVHRHGSDASGAALPSTCGG
AAAAAAASSGGFRAGTSGGAADSAAAAAAGAGSQAPAWLGGWEDGEAVSF
TGKGKGKGRCRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003903UIM_dom