prot_Ecto-sp13_S_contig19776.6398.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19776.6398.1
Unique Nameprot_Ecto-sp13_S_contig19776.6398.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length167
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19776.6398.1 vs. uniprot
Match: D8LBU7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBU7_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 8.100e-101
Identity = 164/168 (97.62%), Postives = 164/168 (97.62%), Query Frame = 0 
Query:    1 RHRGEITKNAARKVDREKVVEEQLAALRQQQESRKHYNQLEEARKQQHARKLKLEAQEVALGERDHVTATMGDALFL--DSLTGEGLDGAGGEPGANGNAPAAVPAGMRQMLNIPAPLPQPQSNQDTRRRFASMSVTERRPRMQKAAAAPDRALGAKRNWAEMLGSLF 166
            RHRGEITKNAARKVDREKVVEEQLAALRQQQESRKHYNQLEEARKQQHARKLKLEAQEVALGERDHVTATMGD LFL  DSLTGEGLDGAGGEPGANGNAPAAVPAGMRQMLNIPAPLPQPQSNQDTRRRFASMSVTERRPRMQKAAAAPDRALGAKRNW EMLGSLF
Sbjct:  137 RHRGEITKNAARKVDREKVVEEQLAALRQQQESRKHYNQLEEARKQQHARKLKLEAQEVALGERDHVTATMGDGLFLFLDSLTGEGLDGAGGEPGANGNAPAAVPAGMRQMLNIPAPLPQPQSNQDTRRRFASMSVTERRPRMQKAAAAPDRALGAKRNWVEMLGSLF 304
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19776.6398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBU7_ECTSI8.100e-10197.62RING-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19776contigEcto-sp13_S_contig19776:663..3241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19776.6398.1mRNA_Ecto-sp13_S_contig19776.6398.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19776 663..3241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19776.6398.1 ID=prot_Ecto-sp13_S_contig19776.6398.1|Name=mRNA_Ecto-sp13_S_contig19776.6398.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp
RHRGEITKNAARKVDREKVVEEQLAALRQQQESRKHYNQLEEARKQQHAR
KLKLEAQEVALGERDHVTATMGDALFLDSLTGEGLDGAGGEPGANGNAPA
AVPAGMRQMLNIPAPLPQPQSNQDTRRRFASMSVTERRPRMQKAAAAPDR
ALGAKRNWAEMLGSLF*
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