mRNA_Ecto-sp13_S_contig19727.6367.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A6H5JB66_9PHAE (Methylenetetrahydrofolate reductase (NAD(P)H) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB66_9PHAE) HSP 1 Score: 349 bits (896), Expect = 4.000e-118 Identity = 173/183 (94.54%), Postives = 180/183 (98.36%), Query Frame = 1
Query: 7 ADADFEIEMNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTAQMIGMIKSSKKSPEESGPEHDAGVTPPAPSSLVQ 555
+DADFEIEM+YIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIK+DEKAVKAFGVD+GE+MC ALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMA+REEDTAQMIGMIKSSKKS EESGPE+ AGVTPPAPSSLVQ
Sbjct: 206 SDADFEIEMSYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKEDEKAVKAFGVDHGEEMCKALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMAEREEDTAQMIGMIKSSKKSSEESGPENGAGVTPPAPSSLVQ 388
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A836CIM9_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIM9_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.260e-61 Identity = 98/157 (62.42%), Postives = 119/157 (75.80%), Query Frame = 1
Query: 7 ADADFEIEMNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTAQMIGMIKS 477
+D DFE+E+ Y+K K +AGAD IITQMFFD +VY ++ CR GI P+VPG+M INAYGGF++MT FC TRVPP L+A++E KD+E A+K G+DYGE+MC LL GAPGLHFYTLNLEKVTVGIL R+ L DY E DTAQM+ MIKS
Sbjct: 205 SDKDFEVELAYLKAKCEAGADVIITQMFFDASVYGRFVAECRRVGITQPIVPGIMPINAYGGFQRMTSFCRTRVPPNLLARIEVNKDNEAAIKEIGLDYGEQMCRELLQLGAPGLHFYTLNLEKVTVGILRRMGLAGDYDEPPTE-DTAQMLDMIKS 360
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A7S0FPW1_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FPW1_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.270e-61 Identity = 94/154 (61.04%), Postives = 116/154 (75.32%), Query Frame = 1
Query: 1 CRADADFEIEMNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTAQMI 462
CR D D++ EM+Y+KEKVDAGAD IITQMFFDP V+ +++K CR GI+ P++PGLMCINAY GFKKM GFC TRVPP L KME +KDD+ AVK FG++YG ++C LL AGA GLHFYTLNLEKV G LD+L + + E+D A M+
Sbjct: 47 CR-DEDYKKEMDYLKEKVDAGADVIITQMFFDPDVFINWVKDCRAWGIDCPIIPGLMCINAYAGFKKMVGFCKTRVPPSLEEKMESMKDDKDAVKQFGIEYGAEVCQKLLDAGACGLHFYTLNLEKVVYGTLDKLGISSGLLEQSNEKDAASMV 199
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A836C869_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C869_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.860e-59 Identity = 93/145 (64.14%), Postives = 111/145 (76.55%), Query Frame = 1
Query: 10 DADFEIEMNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREE 444
D D+E E+ Y+K K DAGAD IITQMFFD +VY +++ CR GI PV+PG+MCINAY GF +MTG C TRVPPEL +ME IKDD+ A+KAFGV+YGE++C ALL GAP LHFYTLNLEKVTVGIL RL L +Y+ A E
Sbjct: 208 DEDWEAELAYLKAKCDAGADVIITQMFFDASVYGRFVQECRRVGITAPVIPGIMCINAYAGFHRMTGLCKTRVPPELRKRMEAIKDDDAAIKAFGVEYGEELCRALLKHGAPVLHFYTLNLEKVTVGILRRLGLAGEYEAAPAAE 352
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A1E7FKZ6_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKZ6_9STRA) HSP 1 Score: 187 bits (476), Expect = 6.190e-55 Identity = 95/162 (58.64%), Postives = 114/162 (70.37%), Query Frame = 1
Query: 1 CRADADFEIEMNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREED---TAQMIGMIKS 477
CR DAD++ EM+Y+K+K+DAGADFIITQMFFD V+ +++K C+ GI PVVPGLMCINAY GF KMTGFC TRVP EL AKM+ IKDD AVKAFG+++G +MC L G LHFYTLNLEK T GIL L R D TA +G++KS
Sbjct: 194 CR-DADYKKEMDYLKKKIDAGADFIITQMFFDTKVFGTFVKDCKTWGINCPVVPGLMCINAYAGFVKMTGFCKTRVPAELRAKMDSIKDDPDAVKAFGIEFGIQMCQDLTEIGVEVLHFYTLNLEKTTYGILKGLGYEVKGSAWARVGDQVKTANGVGVVKS 354
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A448YVV1_9STRA (Methylenetetrahydrofolate reductase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YVV1_9STRA) HSP 1 Score: 186 bits (473), Expect = 2.960e-54 Identity = 88/150 (58.67%), Postives = 108/150 (72.00%), Query Frame = 1
Query: 1 CRADADFEIEMNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDT 450
CR D D++ EM+Y+K+K+DAG DFIITQMFFD V+ S++K CR GI+ P+VPGLMCINAY GF KMT FC TRVP EL AKM+ +KDD A+KAFG+++G +MC L+ G LHFYTLNLEK T GILD L D +E T
Sbjct: 201 CR-DEDYKKEMDYLKKKIDAGGDFIITQMFFDTKVFGSFVKDCRKWGIDCPIVPGLMCINAYAGFVKMTKFCKTRVPTELRAKMDSLKDDSDAIKAFGIEFGTQMCQDLIEIGVDVLHFYTLNLEKTTYGILDGLGYNVTGSADDSDEKT 349
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A7S4N970_9STRA (Methylenetetrahydrofolate reductase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N970_9STRA) HSP 1 Score: 185 bits (470), Expect = 9.310e-54 Identity = 89/133 (66.92%), Postives = 102/133 (76.69%), Query Frame = 1
Query: 10 DADFEIEMNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLN 408
D D++ EM+Y+KEKVDAGADFIITQMFFD AVY +++ CR GI PVVPGLMCINAY GF KMT FC TRV +L KME +KDD A+KAFGV +G ++C L AGAP LHFYTLNLEKV GILD LN
Sbjct: 200 DEDYKKEMDYLKEKVDAGADFIITQMFFDAAVYKTFVADCRKWGIACPVVPGLMCINAYPGFTKMTKFCKTRVTKDLRDKMESLKDDVAAIKAFGVQFGTELCRDLTEAGAPVLHFYTLNLEKVVYGILDNLN 332
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A7S1B9J2_9STRA (Methylenetetrahydrofolate reductase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9J2_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.020e-53 Identity = 92/151 (60.93%), Postives = 107/151 (70.86%), Query Frame = 1
Query: 10 DADFEIEMNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAG-APGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTAQM 459
D D+E E+ Y+KEKVDAG+DFI+TQMFFD AVY +++K CR RGI P+VPGLMCINAY GF MT FC TRVP L+AKMEEIKDD AVKAFGV +G +MC +L+ GLHFYTLNLEKV GILD L + E D M
Sbjct: 201 DEDYEKELIYLKEKVDAGSDFIMTQMFFDTAVYGTFVKDCRARGITCPIVPGLMCINAYRGFMNMTKFCRTRVPESLLAKMEEIKDDVDAVKAFGVSFGIQMCKDILSYNDTKGLHFYTLNLEKVVYGILDGLGITNSASKKTDESDAKSM 351
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A7S2M8D3_9STRA (Methylenetetrahydrofolate reductase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M8D3_9STRA) HSP 1 Score: 184 bits (466), Expect = 3.500e-53 Identity = 88/156 (56.41%), Postives = 109/156 (69.87%), Query Frame = 1
Query: 1 CRADADFEIEMNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTAQMIGM 468
C+ D D++ EM+Y+KEKVDAGADFIITQMFFD V+ ++++ CR GI PVVPGLMCINAY GFKKMT FC TRVP L KM+ +KDD A+K FGV+YG ++C LL +G LHFYTLNLEKV GI D L + + E D M+ +
Sbjct: 205 CKDD-DYKKEMDYLKEKVDAGADFIITQMFFDAEVFKTFVEDCRTWGINCPVVPGLMCINAYPGFKKMTKFCKTRVPKALEEKMDSMKDDADAIKKFGVEYGAEVCRTLLDSGVKILHFYTLNLEKVVYGITDELGITSGLTEQSNESDAKDMVAV 359
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A7S2VBK0_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VBK0_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.020e-52 Identity = 86/153 (56.21%), Postives = 108/153 (70.59%), Query Frame = 1
Query: 10 DADFEIEMNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEI-----KDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTA 453
DAD++ E+ Y+KEKVDAG+DFIITQMFFD V+ +++ CR GI P+VPG+MCINAY GF KMT FC TRVPP L +KM+E+ +D A+K FG+D+G +MC LL GAP LHFYTLNLEKV G++D L L + A E D A
Sbjct: 65 DADYQKELVYLKEKVDAGSDFIITQMFFDATVFLQFVQDCRAIGIACPIVPGIMCINAYAGFVKMTQFCKTRVPPALRSKMDELNALPKEDAANAIKQFGIDFGVEMCQQLLDGGAPVLHFYTLNLEKVVYGVMDGLGLSQNAVAATDEADAA 217 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19727.6367.1 >prot_Ecto-sp13_S_contig19727.6367.1 ID=prot_Ecto-sp13_S_contig19727.6367.1|Name=mRNA_Ecto-sp13_S_contig19727.6367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=184bp MNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINback to top mRNA from alignment at Ecto-sp13_S_contig19727:260..3210- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19727.6367.1 ID=mRNA_Ecto-sp13_S_contig19727.6367.1|Name=mRNA_Ecto-sp13_S_contig19727.6367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2951bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19727:260..3210- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19727:260..3210- >mRNA_Ecto-sp13_S_contig19727.6367.1 ID=mRNA_Ecto-sp13_S_contig19727.6367.1|Name=mRNA_Ecto-sp13_S_contig19727.6367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=552bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19727:260..3210- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |