prot_Ecto-sp13_S_contig19727.6367.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19727.6367.1
Unique Nameprot_Ecto-sp13_S_contig19727.6367.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length184
Homology
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A6H5JB66_9PHAE (Methylenetetrahydrofolate reductase (NAD(P)H) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB66_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 3.840e-113
Identity = 166/175 (94.86%), Postives = 172/175 (98.29%), Query Frame = 0
Query:    1 MNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTAQMIGMIKSSKKSPEESGPEHDAGVTPPAPSSLVQ 175
            M+YIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIK+DEKAVKAFGVD+GE+MC ALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMA+REEDTAQMIGMIKSSKKS EESGPE+ AGVTPPAPSSLVQ
Sbjct:  214 MSYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKEDEKAVKAFGVDHGEEMCKALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMAEREEDTAQMIGMIKSSKKSSEESGPENGAGVTPPAPSSLVQ 388          
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A7S0FPW1_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FPW1_9STRA)

HSP 1 Score: 194 bits (493), Expect = 3.270e-59
Identity = 89/144 (61.81%), Postives = 109/144 (75.69%), Query Frame = 0
Query:    1 MNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTAQMI 144
            M+Y+KEKVDAGAD IITQMFFDP V+ +++K CR  GI+ P++PGLMCINAY GFKKM GFC TRVPP L  KME +KDD+ AVK FG++YG ++C  LL AGA GLHFYTLNLEKV  G LD+L + +       E+D A M+
Sbjct:   56 MDYLKEKVDAGADVIITQMFFDPDVFINWVKDCRAWGIDCPIIPGLMCINAYAGFKKMVGFCKTRVPPSLEEKMESMKDDKDAVKQFGIEYGAEVCQKLLDAGACGLHFYTLNLEKVVYGTLDKLGISSGLLEQSNEKDAASMV 199          
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A836CIM9_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIM9_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.380e-57
Identity = 93/147 (63.27%), Postives = 111/147 (75.51%), Query Frame = 0
Query:    3 YIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTAQMIGMIKS 149
            Y+K K +AGAD IITQMFFD +VY  ++  CR  GI  P+VPG+M INAYGGF++MT FC TRVPP L+A++E  KD+E A+K  G+DYGE+MC  LL  GAPGLHFYTLNLEKVTVGIL R+ L  DY     E DTAQM+ MIKS
Sbjct:  215 YLKAKCEAGADVIITQMFFDASVYGRFVAECRRVGITQPIVPGIMPINAYGGFQRMTSFCRTRVPPNLLARIEVNKDNEAAIKEIGLDYGEQMCRELLQLGAPGLHFYTLNLEKVTVGILRRMGLAGDYDEPPTE-DTAQMLDMIKS 360          
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A836C869_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C869_9STRA)

HSP 1 Score: 192 bits (488), Expect = 6.350e-57
Identity = 89/136 (65.44%), Postives = 105/136 (77.21%), Query Frame = 0
Query:    3 YIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREE 138
            Y+K K DAGAD IITQMFFD +VY  +++ CR  GI  PV+PG+MCINAY GF +MTG C TRVPPEL  +ME IKDD+ A+KAFGV+YGE++C ALL  GAP LHFYTLNLEKVTVGIL RL L  +Y+ A   E
Sbjct:  217 YLKAKCDAGADVIITQMFFDASVYGRFVQECRRVGITAPVIPGIMCINAYAGFHRMTGLCKTRVPPELRKRMEAIKDDDAAIKAFGVEYGEELCRALLKHGAPVLHFYTLNLEKVTVGILRRLGLAGEYEAAPAAE 352          
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A448YVV1_9STRA (Methylenetetrahydrofolate reductase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YVV1_9STRA)

HSP 1 Score: 180 bits (456), Expect = 6.970e-52
Identity = 83/140 (59.29%), Postives = 101/140 (72.14%), Query Frame = 0
Query:    1 MNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDT 140
            M+Y+K+K+DAG DFIITQMFFD  V+ S++K CR  GI+ P+VPGLMCINAY GF KMT FC TRVP EL AKM+ +KDD  A+KAFG+++G +MC  L+  G   LHFYTLNLEK T GILD L         D +E T
Sbjct:  210 MDYLKKKIDAGGDFIITQMFFDTKVFGSFVKDCRKWGIDCPIVPGLMCINAYAGFVKMTKFCKTRVPTELRAKMDSLKDDSDAIKAFGIEFGTQMCQDLIEIGVDVLHFYTLNLEKTTYGILDGLGYNVTGSADDSDEKT 349          
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A7S4N970_9STRA (Methylenetetrahydrofolate reductase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N970_9STRA)

HSP 1 Score: 180 bits (456), Expect = 7.820e-52
Identity = 86/126 (68.25%), Postives = 97/126 (76.98%), Query Frame = 0
Query:    1 MNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLN 126
            M+Y+KEKVDAGADFIITQMFFD AVY +++  CR  GI  PVVPGLMCINAY GF KMT FC TRV  +L  KME +KDD  A+KAFGV +G ++C  L  AGAP LHFYTLNLEKV  GILD LN
Sbjct:  207 MDYLKEKVDAGADFIITQMFFDAAVYKTFVADCRKWGIACPVVPGLMCINAYPGFTKMTKFCKTRVTKDLRDKMESLKDDVAAIKAFGVQFGTELCRDLTEAGAPVLHFYTLNLEKVVYGILDNLN 332          
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A1E7FKZ6_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKZ6_9STRA)

HSP 1 Score: 179 bits (454), Expect = 8.250e-52
Identity = 89/152 (58.55%), Postives = 106/152 (69.74%), Query Frame = 0
Query:    1 MNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREED---TAQMIGMIKS 149
            M+Y+K+K+DAGADFIITQMFFD  V+ +++K C+  GI  PVVPGLMCINAY GF KMTGFC TRVP EL AKM+ IKDD  AVKAFG+++G +MC  L   G   LHFYTLNLEK T GIL  L          R  D   TA  +G++KS
Sbjct:  203 MDYLKKKIDAGADFIITQMFFDTKVFGTFVKDCKTWGINCPVVPGLMCINAYAGFVKMTGFCKTRVPAELRAKMDSIKDDPDAVKAFGIEFGIQMCQDLTEIGVEVLHFYTLNLEKTTYGILKGLGYEVKGSAWARVGDQVKTANGVGVVKS 354          
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A7S2M8D3_9STRA (Methylenetetrahydrofolate reductase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M8D3_9STRA)

HSP 1 Score: 179 bits (453), Expect = 2.090e-51
Identity = 84/146 (57.53%), Postives = 102/146 (69.86%), Query Frame = 0
Query:    1 MNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTAQMIGM 146
            M+Y+KEKVDAGADFIITQMFFD  V+ ++++ CR  GI  PVVPGLMCINAY GFKKMT FC TRVP  L  KM+ +KDD  A+K FGV+YG ++C  LL +G   LHFYTLNLEKV  GI D L + +       E D   M+ +
Sbjct:  214 MDYLKEKVDAGADFIITQMFFDAEVFKTFVEDCRTWGINCPVVPGLMCINAYPGFKKMTKFCKTRVPKALEEKMDSMKDDADAIKKFGVEYGAEVCRTLLDSGVKILHFYTLNLEKVVYGITDELGITSGLTEQSNESDAKDMVAV 359          
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: A0A7S1B9J2_9STRA (Methylenetetrahydrofolate reductase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9J2_9STRA)

HSP 1 Score: 179 bits (453), Expect = 2.390e-51
Identity = 88/142 (61.97%), Postives = 101/142 (71.13%), Query Frame = 0
Query:    3 YIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAG-APGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTAQM 143
            Y+KEKVDAG+DFI+TQMFFD AVY +++K CR RGI  P+VPGLMCINAY GF  MT FC TRVP  L+AKMEEIKDD  AVKAFGV +G +MC  +L+     GLHFYTLNLEKV  GILD L +         E D   M
Sbjct:  210 YLKEKVDAGSDFIMTQMFFDTAVYGTFVKDCRARGITCPIVPGLMCINAYRGFMNMTKFCRTRVPESLLAKMEEIKDDVDAVKAFGVSFGIQMCKDILSYNDTKGLHFYTLNLEKVVYGILDGLGITNSASKKTDESDAKSM 351          
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Match: K0TG67_THAOC (Methylenetetrahydrofolate reductase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TG67_THAOC)

HSP 1 Score: 177 bits (449), Expect = 8.400e-51
Identity = 84/146 (57.53%), Postives = 104/146 (71.23%), Query Frame = 0
Query:    1 MNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTAQMIGM 146
            M+Y+KEKVDAG DFIITQMFFD  V+ +++K CR+ GI  PVVPGLMCINAY GFKKMT FC TRVP +L  KM+ +KDD  AVK FGV +G ++C +LL +G   LHFYTLNLEKV  GI D L + +       E+D   M+ +
Sbjct:  214 MDYLKEKVDAGGDFIITQMFFDAEVFKTFVKDCREWGINCPVVPGLMCINAYPGFKKMTKFCKTRVPKDLGEKMDAMKDDPDAVKKFGVTFGSEICRSLLDSGVEILHFYTLNLEKVVYGITDDLGITSGLVEKSDEKDAKDMVAV 359          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19727.6367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JB66_9PHAE3.840e-11394.86Methylenetetrahydrofolate reductase (NAD(P)H) n=2 ... [more]
A0A7S0FPW1_9STRA3.270e-5961.81Methylenetetrahydrofolate reductase (NAD(P)H) n=1 ... [more]
A0A836CIM9_9STRA1.380e-5763.27Methylenetetrahydrofolate reductase (NAD(P)H) n=1 ... [more]
A0A836C869_9STRA6.350e-5765.44Methylenetetrahydrofolate reductase (NAD(P)H) n=1 ... [more]
A0A448YVV1_9STRA6.970e-5259.29Methylenetetrahydrofolate reductase n=2 Tax=Pseudo... [more]
A0A7S4N970_9STRA7.820e-5268.25Methylenetetrahydrofolate reductase n=1 Tax=Odonte... [more]
A0A1E7FKZ6_9STRA8.250e-5258.55Methylenetetrahydrofolate reductase (NAD(P)H) n=1 ... [more]
A0A7S2M8D3_9STRA2.090e-5157.53Methylenetetrahydrofolate reductase n=1 Tax=Skelet... [more]
A0A7S1B9J2_9STRA2.390e-5161.97Methylenetetrahydrofolate reductase n=2 Tax=Coreth... [more]
K0TG67_THAOC8.400e-5157.53Methylenetetrahydrofolate reductase n=1 Tax=Thalas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.220coord: 1..139
e-value: 1.6E-48
score: 167.2
NoneNo IPR availablePANTHERPTHR45754FAMILY NOT NAMEDcoord: 1..137
IPR003171Methylenetetrahydrofolate reductasePFAMPF02219MTHFRcoord: 2..125
e-value: 1.7E-42
score: 145.7
IPR029041FAD-linked oxidoreductase-likeSUPERFAMILY51730FAD-linked oxidoreductasecoord: 2..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19727contigEcto-sp13_S_contig19727:260..3180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19727.6367.1mRNA_Ecto-sp13_S_contig19727.6367.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19727 260..3210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19727.6367.1 ID=prot_Ecto-sp13_S_contig19727.6367.1|Name=mRNA_Ecto-sp13_S_contig19727.6367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=184bp
MNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCIN
AYGGFKKMTGFCLTRVPPELMAKMEEIKDDEKAVKAFGVDYGEKMCNALL
AAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMADREEDTAQMIGMIKSS
KKSPEESGPEHDAGVTPPAPSSLVQVKYYVVSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003171Mehydrof_redctse
IPR029041FAD-linked_oxidoreductase-like