prot_Ecto-sp13_S_contig19617.6322.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19617.6322.1
Unique Nameprot_Ecto-sp13_S_contig19617.6322.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length257
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19617.6322.1 vs. uniprot
Match: D7G602_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G602_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 2.620e-39
Identity = 65/78 (83.33%), Postives = 69/78 (88.46%), Query Frame = 0 
Query:    4 QVYDNDFNDVGFGALKIMVDGQGTICGNTCVGDDCELTADYIDDASDTWDRACHEGDEVTSTSIYYDDDSKTYYSGYD 81
            +VYDNDFNDVGFGALKIMVDGQGTICGNTC GDDC+L  DY+DD  DTWD AC+E DEVTSTS YYDDD KTYYSGYD
Sbjct:    2 KVYDNDFNDVGFGALKIMVDGQGTICGNTCAGDDCQLIGDYLDDTIDTWDHACYEDDEVTSTSSYYDDDRKTYYSGYD 79
[Close]
BLAST of mRNA_Ecto-sp13_S_contig19617.6322.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 4.980e-37
Identity = 65/79 (82.28%), Postives = 68/79 (86.08%), Query Frame = 0 
Query:    3 RQVYDNDFNDVGFGALKIMVDGQGTICGNTCVGDDCELTADYIDDASDTWDRACHEGDEVTSTSIYYDDDSKTYYSGYD 81
              VYDNDFNDVGFGALKIMVDGQGTICGNTC GDDC+L  DY+DD  DTWD AC+E DEVTSTS YYDDD KTYYSGYD
Sbjct:  269 NSVYDNDFNDVGFGALKIMVDGQGTICGNTCAGDDCQLIGDYLDDTIDTWDHACYEDDEVTSTSSYYDDDRKTYYSGYD 347
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19617.6322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G602_ECTSI2.620e-3983.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZD2_ECTSI4.980e-3782.28FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19617contigEcto-sp13_S_contig19617:783..1886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19617.6322.1mRNA_Ecto-sp13_S_contig19617.6322.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19617 783..1886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19617.6322.1 ID=prot_Ecto-sp13_S_contig19617.6322.1|Name=mRNA_Ecto-sp13_S_contig19617.6322.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=257bp
PARQVYDNDFNDVGFGALKIMVDGQGTICGNTCVGDDCELTADYIDDASD
TWDRACHEGDEVTSTSIYYDDDSKTYYSGYDDVTSTSSYYDDDSKTFYSA
YDDLTSIVSEDDDVTSSSSYYDNDTQTYSSGYDGVTSTVGGYDEVTSTSS
YYGDGSETYISGYDEVPSTLDEDDEVTTVTVSEDHEVTSASSYYEEVTST
VSVDDDTTISPSEDDDDSGDDDSSDGDSDCDSHDGESSDDDVLGQGYDFA
GVMASQ*
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