mRNA_Ecto-sp13_S_contig19518.6281.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19518.6281.1 vs. uniprot
Match: D7FP44_ECTSI (Sirohydrochlorin ferrochelatase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP44_ECTSI) HSP 1 Score: 184 bits (466), Expect = 2.000e-53 Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 3
Query: 3 AAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPSLMVAAAKRHPGVAWVVSEPLGLQELMPRVMHAAVSESVSGGAWRHGGE 281
AAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIP+LMVAAAKRHPGV WVVSEPLGLQELMPRVMHAAVSESV+GGAWRHGGE
Sbjct: 123 AAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPALMVAAAKRHPGVGWVVSEPLGLQELMPRVMHAAVSESVAGGAWRHGGE 215
BLAST of mRNA_Ecto-sp13_S_contig19518.6281.1 vs. uniprot
Match: A0A836CEJ2_9STRA (CbiX-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ2_9STRA) HSP 1 Score: 130 bits (327), Expect = 8.590e-34 Identity = 62/90 (68.89%), Postives = 75/90 (83.33%), Query Frame = 3
Query: 6 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPSLMVAAAKRHPGVAWVVSEPLGLQELMPRVMHAAVSESVSGGAWRHG 275
AHMELAEP+IE+AFD+CVAAGA+ VVLHPFFLSPGRHV+SDIP L+ AAA RHPGV W VSEPLGL LMP++M+ AV+ ++ W+ G
Sbjct: 29 AHMELAEPTIEQAFDKCVAAGAKAVVLHPFFLSPGRHVSSDIPELLAAAASRHPGVKWKVSEPLGLAPLMPQLMNDAVAAALQEPEWQGG 118
BLAST of mRNA_Ecto-sp13_S_contig19518.6281.1 vs. uniprot
Match: A0A7G9NWY9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9NWY9_9BACT) HSP 1 Score: 105 bits (263), Expect = 3.870e-24 Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 3
Query: 6 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPSLMVAAAKRHPGVAWVVSEPLGLQELMPRVMHAAVSESV 251
AHMELAEP+IE+AFDRCV GA+ VV HPFFL PG+H DIP+L AAA +HPG+ W+V+ P+G+ E MP VM+ A+ +
Sbjct: 47 AHMELAEPTIEQAFDRCVQRGAKVVVCHPFFLLPGKHWNQDIPNLTAAAAGKHPGIRWMVTAPIGMNEKMPLVMNDAIDHCL 128
BLAST of mRNA_Ecto-sp13_S_contig19518.6281.1 vs. uniprot
Match: A0A3D3W099_9PLAN (Sirohydrochlorin cobaltochelatase n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D3W099_9PLAN) HSP 1 Score: 100 bits (250), Expect = 3.040e-22 Identity = 57/122 (46.72%), Postives = 72/122 (59.02%), Query Frame = 3
Query: 6 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPSLMVAAAKRHPGVAWVVSEPLGLQELMPRVMHAAVSESVSGGAWRHGGE*RSTLLGCPPYPWPGGVGKEV*LISPELRS 371
AHMELAEPSI++AFDRCVA GA +VV+ P+FLSPGRH T DIP L+ AA HPGV W+V+ P GL + + + + V S+ RH L P P P + I+P L S
Sbjct: 45 AHMELAEPSIQQAFDRCVAQGAGRVVVFPWFLSPGRHWTEDIPRLVQQAAAAHPGVEWLVTPPFGLHQGLLQAVQDRVDVSL-----RH-------FLSATPQPAPAETSNGI-PIAPRLNS 153
BLAST of mRNA_Ecto-sp13_S_contig19518.6281.1 vs. uniprot
Match: A0A6P4DL50_ARADU (sirohydrochlorin ferrochelatase, chloroplastic isoform X1 n=7 Tax=Arachis TaxID=3817 RepID=A0A6P4DL50_ARADU) HSP 1 Score: 101 bits (252), Expect = 4.950e-22 Identity = 52/89 (58.43%), Postives = 64/89 (71.91%), Query Frame = 3
Query: 6 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPSLMVAAAKRHPGVAWVVSEPLGLQELMPRVMHAAVS---ESVSGGA 263
AHMELAEPSI +AF CV GAQ+VV+ PFFLSPGRH DIPSL AAK HPGV+++V+ PLGL EL+ VM+ + + +SG A
Sbjct: 95 AHMELAEPSIRDAFQSCVEQGAQRVVISPFFLSPGRHWNQDIPSLSSEAAKEHPGVSYIVTAPLGLHELLVDVMNDRIKHCLKHISGDA 183
BLAST of mRNA_Ecto-sp13_S_contig19518.6281.1 vs. uniprot
Match: A0A3M2BXR8_9BACT (Cobalamin biosynthesis protein CbiX n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M2BXR8_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 9.650e-22 Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 3
Query: 6 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPSLMVAAAKRHPGVAWVVSEPLGLQELMPRVMHAAVSESVSGGA 263
AHMELAEPSI AFDRCVA GA++VV+ P+FL PGRH T DIP L AA+RHPGVA++V+ P+GL LM V+ A + ++ A
Sbjct: 53 AHMELAEPSIATAFDRCVARGARRVVVLPYFLLPGRHWTDDIPELTRRAARRHPGVAYLVAAPIGLHPLMLEVLAARLQHCLAHAA 138
BLAST of mRNA_Ecto-sp13_S_contig19518.6281.1 vs. uniprot
Match: A0A1S2XH14_CICAR (sirohydrochlorin ferrochelatase, chloroplastic n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XH14_CICAR) HSP 1 Score: 100 bits (249), Expect = 1.330e-21 Identity = 50/89 (56.18%), Postives = 68/89 (76.40%), Query Frame = 3
Query: 6 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPSLMVAAAKRHPGVAWVVSEPLGLQELMPRVMHAAVS---ESVSGGA 263
AHMELAEPSI +AF CV GA++V++ PFFLSPGRH + DIPSL AAAK+HPGV+++V+ PLGL EL+ V++ ++ + V+G A
Sbjct: 96 AHMELAEPSIGDAFQSCVQQGARRVIISPFFLSPGRHWSQDIPSLSAAAAKQHPGVSYIVTAPLGLHELLVDVVNDRITYCLKHVAGDA 184
BLAST of mRNA_Ecto-sp13_S_contig19518.6281.1 vs. uniprot
Match: UPI000DEC597C (sirohydrochlorin ferrochelatase, chloroplastic-like n=1 Tax=Arachis hypogaea TaxID=3818 RepID=UPI000DEC597C) HSP 1 Score: 98.2 bits (243), Expect = 1.410e-21 Identity = 50/89 (56.18%), Postives = 63/89 (70.79%), Query Frame = 3
Query: 6 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPSLMVAAAKRHPGVAWVVSEPLGLQELMPRVMHAAVS---ESVSGGA 263
AHMELAEPSI +AF CV AQ+VV+ PFFLSPGRH DIPSL AAK HPGV+++V+ PLGL EL+ V++ + + +SG A
Sbjct: 21 AHMELAEPSIRDAFQSCVEQDAQRVVISPFFLSPGRHWNQDIPSLSAEAAKEHPGVSYIVTAPLGLHELLVDVVNDRIKHCLKHISGDA 109
BLAST of mRNA_Ecto-sp13_S_contig19518.6281.1 vs. uniprot
Match: D8TC46_SELML (Uncharacterized protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TC46_SELML) HSP 1 Score: 99.0 bits (245), Expect = 1.730e-21 Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 3
Query: 3 AAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPSLMVAAAKRHPGVAWVVSEPLGLQELMPRVMHAAVSESVS 254
AAHMELA PSIE+AFDRCV GAQ+V++ P+FL PGRH DIP+L AA+ +HPG+ ++V+ P+GL ELM V+ + VS
Sbjct: 56 AAHMELAAPSIEDAFDRCVELGAQRVIVSPYFLFPGRHWNKDIPALAAAASAKHPGIRYLVTAPIGLHELMVDVLEDRMKYCVS 139
BLAST of mRNA_Ecto-sp13_S_contig19518.6281.1 vs. uniprot
Match: A0A444Y3H4_ARAHY (Uncharacterized protein n=2 Tax=Arachis TaxID=3817 RepID=A0A444Y3H4_ARAHY) HSP 1 Score: 99.0 bits (245), Expect = 2.310e-21 Identity = 47/70 (67.14%), Postives = 55/70 (78.57%), Query Frame = 3
Query: 6 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPSLMVAAAKRHPGVAWVVSEPLGLQELM 215
AHMELAEPSI +AF CV GAQ+VV+ PFFLSPGRH DIPSL AAK HPGV+++V+ PLGL EL+
Sbjct: 98 AHMELAEPSIRDAFQSCVEQGAQRVVISPFFLSPGRHWNQDIPSLSAEAAKEHPGVSYIVTAPLGLHELL 167 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19518.6281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19518.6281.1 >prot_Ecto-sp13_S_contig19518.6281.1 ID=prot_Ecto-sp13_S_contig19518.6281.1|Name=mRNA_Ecto-sp13_S_contig19518.6281.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp MELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPSLMVAAAKRback to top mRNA from alignment at Ecto-sp13_S_contig19518:632..1660+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19518.6281.1 ID=mRNA_Ecto-sp13_S_contig19518.6281.1|Name=mRNA_Ecto-sp13_S_contig19518.6281.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1029bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19518:632..1660+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19518:632..1660+ >mRNA_Ecto-sp13_S_contig19518.6281.1 ID=mRNA_Ecto-sp13_S_contig19518.6281.1|Name=mRNA_Ecto-sp13_S_contig19518.6281.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=273bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19518:632..1660+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |