mRNA_Ecto-sp13_S_contig19486.6264.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19486.6264.1 vs. uniprot
Match: D7FXR0_ECTSI (PhoD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXR0_ECTSI) HSP 1 Score: 136 bits (343), Expect = 2.580e-36 Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 1
Query: 1 RFQTMIRNPEYNQFLDFMCPAARGLAMTPPPGTDSAICPRTILGTWDDHDYGWNDGDSRNEQK 189
+FQTMIRNPEYNQFLDFMCPAARGLAMTPPPGT+SAICPRTILGTWDDHDYGWNDGDSRNEQK
Sbjct: 201 KFQTMIRNPEYNQFLDFMCPAARGLAMTPPPGTNSAICPRTILGTWDDHDYGWNDGDSRNEQK 263
BLAST of mRNA_Ecto-sp13_S_contig19486.6264.1 vs. uniprot
Match: A0A7S1XRU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRU9_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 6.220e-17 Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 1 RFQTMIRNPEYNQFLDFMCPAARGLAMTPPPGTDSAICPRTILGTWDDHDYGWNDGDSRNEQK 189
R+ +R+P Y FL++MCP A PPPGTD +CPR+I+GTWDDHD GWNDG+SR Q+
Sbjct: 190 RWLAQLRDPGYAAFLEYMCPEAVAKGYWPPPGTDLTLCPRSIIGTWDDHDSGWNDGNSRLPQR 252
BLAST of mRNA_Ecto-sp13_S_contig19486.6264.1 vs. uniprot
Match: UPI000D1D0558 (uncharacterized protein LOC9650319 isoform X1 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1D0558) HSP 1 Score: 78.2 bits (191), Expect = 2.150e-15 Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 1 RFQTMIRNPEYNQFLDFMCPAARGLAMTPPPGTDSAICPRTILGTWDDHDYGWNDGDSRNEQK 189
+ Q + NP+Y QFL FMCP R + PPPG D A+CP+ I GT+ DHDYGW G+ R QK
Sbjct: 155 KMQVQLANPDYAQFLAFMCPGHREKGLFPPPGADPAVCPKRIFGTYSDHDYGWRHGNKRLPQK 217
BLAST of mRNA_Ecto-sp13_S_contig19486.6264.1 vs. uniprot
Match: UPI000D1C580E (uncharacterized protein LOC112348404 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C580E) HSP 1 Score: 77.8 bits (190), Expect = 2.930e-15 Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 1 RFQTMIRNPEYNQFLDFMCPAARGLAMTPPPGTDSAICPRTILGTWDDHDYGWNDGDSRNEQK 189
+ Q + NP+Y QFL FMCP R + PPPG D A+CP+ I GT+ DHDYGW G+ R QK
Sbjct: 155 KMQIQLANPDYAQFLAFMCPGHREKGLFPPPGADPAVCPKRIFGTYSDHDYGWRHGNKRLPQK 217
BLAST of mRNA_Ecto-sp13_S_contig19486.6264.1 vs. uniprot
Match: A0A2R6XD72_MARPO (PhoD domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XD72_MARPO) HSP 1 Score: 77.4 bits (189), Expect = 4.020e-15 Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 1 RFQTMIRNPEYNQFLDFMCPAARGLAMTPPPGTDSAICPRTILGTWDDHDYGWNDGDSRNEQK 189
R Q + NP+Y QFL +MCP R + PP GTD ICPR I GT+DDHDY W++G+ R +K
Sbjct: 79 RMQAQLSNPDYAQFLAYMCPGHRAKGLHPPTGTDPTICPRPIFGTYDDHDYSWDNGNKRLPRK 141
BLAST of mRNA_Ecto-sp13_S_contig19486.6264.1 vs. uniprot
Match: A0A2R6XD78_MARPO (PhoD domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XD78_MARPO) HSP 1 Score: 77.4 bits (189), Expect = 4.110e-15 Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 1 RFQTMIRNPEYNQFLDFMCPAARGLAMTPPPGTDSAICPRTILGTWDDHDYGWNDGDSRNEQK 189
R Q + NP+Y QFL +MCP R + PP GTD ICPR I GT+DDHDY W++G+ R +K
Sbjct: 204 RMQAQLSNPDYAQFLAYMCPGHRAKGLHPPTGTDPTICPRPIFGTYDDHDYSWDNGNKRLPRK 266
BLAST of mRNA_Ecto-sp13_S_contig19486.6264.1 vs. uniprot
Match: A0A1Y1HKK1_KLENI (Alkaline phosphatase D n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HKK1_KLENI) HSP 1 Score: 75.1 bits (183), Expect = 2.680e-14 Identity = 32/63 (50.79%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 1 RFQTMIRNPEYNQFLDFMCPAARGLAMTPPPGTDSAICPRTILGTWDDHDYGWNDGDSRNEQK 189
+ Q + +P+Y +FL +MCPA + + P G D A+CPRTILGTWDDHDY W DG+ R +K
Sbjct: 272 KLQAQLEHPDYVRFLRYMCPAWQPHGLFGPDGADPALCPRTILGTWDDHDYNWQDGNRRLPRK 334
BLAST of mRNA_Ecto-sp13_S_contig19486.6264.1 vs. uniprot
Match: D8TY44_VOLCA (PhoD domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TY44_VOLCA) HSP 1 Score: 74.7 bits (182), Expect = 3.650e-14 Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 1 RFQTMIRNPEYNQFLDFMCPAARG---LAMT----------PPPGTDSAICPRTILGTWDDHDYGWNDGDSRNEQK 189
R+ I NP+Y FLDFMCP G A T PP GTD A+CPR I+G +DDHDYGWN+GD R +K
Sbjct: 177 RWVHAIHNPDYRAFLDFMCPPTHGSVGAATTSTIGAEPGRFPPTGTDPAVCPRPIMGVYDDHDYGWNNGDRRMPKK 252
BLAST of mRNA_Ecto-sp13_S_contig19486.6264.1 vs. uniprot
Match: A0A7R9UHQ3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UHQ3_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 6.810e-14 Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 1 RFQTMIRNPEYNQFLDFMCPAARGLAMTPPPGTDSAICPRTILGTWDDHDYGWNDGDSR 177
R+ +++P Y+ FL++MCP A+ PPPGTD+ +CPR I+G WDDHD GWN+ + R
Sbjct: 176 RWLYTLKDPGYSAFLNYMCPNAQAAGYWPPPGTDATLCPRHIIGVWDDHDSGWNNANER 234
BLAST of mRNA_Ecto-sp13_S_contig19486.6264.1 vs. uniprot
Match: A0A2V0PCC7_9CHLO (PhoD domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PCC7_9CHLO) HSP 1 Score: 73.2 bits (178), Expect = 1.270e-13 Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 1 RFQTMIRNPEYNQFLDFMCPAARGLAMTPPPGTDSAICPRTILGTWDDHDYGWNDGDSRNEQK 189
R + + PEY F+DFMC PP G D+A CPR I+GTWDDHD+GWN+GD R+ +K
Sbjct: 220 RMEGQLGMPEYAAFVDFMCDGPGRGGAYPPNGADAAQCPRPIVGTWDDHDFGWNNGDKRHPRK 282 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19486.6264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19486.6264.1 >prot_Ecto-sp13_S_contig19486.6264.1 ID=prot_Ecto-sp13_S_contig19486.6264.1|Name=mRNA_Ecto-sp13_S_contig19486.6264.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp MIRNPEYNQFLDFMCPAARGLAMTPPPGTDSAICPRTILGTWDDHDYGWNback to top mRNA from alignment at Ecto-sp13_S_contig19486:2205..3022- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19486.6264.1 ID=mRNA_Ecto-sp13_S_contig19486.6264.1|Name=mRNA_Ecto-sp13_S_contig19486.6264.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=818bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19486:2205..3022- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19486:2205..3022- >mRNA_Ecto-sp13_S_contig19486.6264.1 ID=mRNA_Ecto-sp13_S_contig19486.6264.1|Name=mRNA_Ecto-sp13_S_contig19486.6264.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19486:2205..3022- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |