mRNA_Ecto-sp13_S_contig19453.6252.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19453.6252.1
Unique NamemRNA_Ecto-sp13_S_contig19453.6252.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig19453.6252.1 vs. uniprot
Match: D7FYI6_ECTSI (F-actin-capping protein subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI6_ECTSI)

HSP 1 Score: 486 bits (1251), Expect = 2.780e-172
Identity = 253/263 (96.20%), Postives = 255/263 (96.96%), Query Frame = 2
Query:    2 PLQKATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEAEGEADNAAGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSTKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLTREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAACLQSPFAAQLQGAVGQHGARRQGGDLMSALNAKLGVPP 790
            PLQ+ATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQME   EDANMLLDAYREVYFSGGVSSVYLWEEEA+GEADNA GAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLS KNPTQATYKVNTTVMLSV PEDEAVGATSLSGNL REKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAA LQSPFAAQLQGAVGQHGARRQGGDLMSALNAKLGVPP
Sbjct:   48 PLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQME---EDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVGPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQGGDLMSALNAKLGVPP 307          
BLAST of mRNA_Ecto-sp13_S_contig19453.6252.1 vs. uniprot
Match: A0A6H5KTN9_9PHAE (F-actin-capping protein subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN9_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 1.120e-87
Identity = 138/144 (95.83%), Postives = 139/144 (96.53%), Query Frame = 2
Query:  179 MLLDAYREVYFSGGVSSVYLWEEEAEGEADNAAGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSTKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLTREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDG 610
            MLLDAYREVYFSGGVSSVYLWEEEAEG ADNA GAAGSFAGCFLILKRVGGDGEEGP GAWESSHVVQVVLS KNPTQATYKVNTTVMLSVDP+DEAVGATSLSGNL REKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDG
Sbjct:    1 MLLDAYREVYFSGGVSSVYLWEEEAEGGADNATGAAGSFAGCFLILKRVGGDGEEGPAGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPKDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDG 144          
BLAST of mRNA_Ecto-sp13_S_contig19453.6252.1 vs. uniprot
Match: A0A835YY13_9STRA (F-actin-capping protein subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY13_9STRA)

HSP 1 Score: 226 bits (577), Expect = 5.870e-70
Identity = 139/271 (51.29%), Postives = 170/271 (62.73%), Query Frame = 2
Query:    2 PLQKATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEAEGEADNAAGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSTKNPTQATYKVNTTVMLSVDPEDEAVGA-----------TSLSGNLTREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAACLQSPFAAQLQGAVGQHGARRQGG--DLMSALNAK 775
            PLQ+ATDP TGR+YL CEYNRDA SYRSPWSN YDPP+ED +   D+LRQ+E    DAN LLDAYRE+Y+ GG SSVYLW+ E         G+   FAG FLI K       EG   AWES HV+QV        +ATYK+N+T+MLSV                    TSLSGN+T   E+T  F++  DHL N+G MIE MEN +R  +DG+YVQKTRQI+ SVR +  ASA    + F +QL  A+G HGA+R GG    ++ALN K
Sbjct:   45 PLQEATDPVTGRQYLLCEYNRDADSYRSPWSNAYDPPLEDAYELRDQLRQLEI---DANELLDAYRELYYQGGTSSVYLWDLEE--------GSGKGFAGAFLIKKSTA----EGT--AWESIHVIQVDPDVGGGKRATYKLNSTIMLSVQXXXXXXXXXXXXXXXXXXXTSLSGNMTSAAEQTLAFASQDDHLSNIGKMIEKMENDVRMSIDGVYVQKTRQILCSVRRSN-ASAPAQGAAFTSQLNQAIGAHGAKRDGGLAAQIAALNFK 297          
BLAST of mRNA_Ecto-sp13_S_contig19453.6252.1 vs. uniprot
Match: A0A7S4A8I8_9STRA (F-actin-capping protein subunit beta n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8I8_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.880e-61
Identity = 116/243 (47.74%), Postives = 155/243 (63.79%), Query Frame = 2
Query:    2 PLQKATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEAEGEADNAAGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSTKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLTREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTR-GASAACLQSPFAAQLQGAVGQH 727
            PL++A   +TGR YL C+YNRD  S+RSPWSNKYDPPI+DGF P ++LR++E    +AN L D YRE+YF GG SSVYLWE + +            FAGCFLI K+V G  E    G W+S HVV+V L   N   A YK+ TTV+L++D + E+VG T+LSG LTR  E+      +  H+ N+G +IE  E  +R +MD LY+QKTR++V+++RS + G S       F A L  AV +H
Sbjct:  111 PLEEAKCKDTGRAYLLCDYNRDGDSHRSPWSNKYDPPIDDGFVPSEKLRRLEV---EANTLFDCYRELYFEGGTSSVYLWELDGD-----------DFAGCFLIKKKVSGH-EFVTEGCWDSIHVVEVNLE-DNGKAANYKLTTTVILTMDVQKESVGDTNLSGTLTRTAEKRSVIDAEHTHMHNMGTLIEDTETDIRVNMDALYIQKTREVVNNIRSPQTGPSQGAA---FTASLNEAVKRH 334          
BLAST of mRNA_Ecto-sp13_S_contig19453.6252.1 vs. uniprot
Match: F0YCA6_AURAN (F-actin-capping protein subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCA6_AURAN)

HSP 1 Score: 203 bits (516), Expect = 4.190e-61
Identity = 118/246 (47.97%), Postives = 152/246 (61.79%), Query Frame = 2
Query:    2 PLQKATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEAEGEADNAAGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSTKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLTREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAACLQSPFAAQLQGAVGQHGARR 739
            PL++AT  E+GR+YL C+YNRD  SYRSPWSN Y+PP++DGF P  +LR +E    +AN L DAYRE+YF GG SSVYLW+ +            G FAGCFLI K V G  E    GAW+S HVV+V  +     +ATYK+ TTVMLS+D    AVG ++LSG+LTR  E+         H+ N+G MIE ME  +R+ +D LY+QKTR++VSS+R             F   L  AV +HG  R
Sbjct:   49 PLEEATCAESGRKYLLCDYNRDGDSYRSPWSNAYEPPLDDGFVPSAKLRALEV---EANALFDAYRELYFEGGTSSVYLWDLD------------GGFAGCFLIKKGVSGH-EFVSTGAWDSIHVVEVAEAGDG--RATYKLTTTVMLSMDVHKPAVGDSNLSGSLTRMAEKACAVDEAHPHVANIGSMIEDMETDIRTYLDSLYIQKTREVVSSIRKLH--KGPTQDKGFTMNLNSAVLKHGKNR 274          
BLAST of mRNA_Ecto-sp13_S_contig19453.6252.1 vs. uniprot
Match: A0A7S2F5N5_9STRA (F-actin-capping protein subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5N5_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.680e-60
Identity = 122/251 (48.61%), Postives = 159/251 (63.35%), Query Frame = 2
Query:    2 PLQKATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEAEGEADNAAGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSTKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLTREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAACLQSP-----FAAQLQGAVGQHGARR 739
            PLQ+AT  +TGR +L C+YNRD  SYRSPWSN+YDPPI+DGFTP + LRQME    DAN L D+YR+ Y+ GG SSVYLW+ +              FAGCFLI K V G       G+W+S HVV+V  + K   QATYK+ +T++LS+     AVG ++LSG +T++KE T   +    H  N+G MIE ME  LRS+MD LY+ KTR+IVSS+R+ R      L++P     F   L  AV  HGA++
Sbjct:   50 PLQEATCGQTGRPFLLCDYNRDGDSYRSPWSNQYDPPIDDGFTPSEALRQMEI---DANSLYDSYRDQYYEGGTSSVYLWDLD------------DGFAGCFLIKKSVEGHAFVS-AGSWDSIHVVEV--TEKGGGQATYKLTSTLLLSMGVNKAAVGDSNLSGCMTKQKEMTCEVTAVRPHTTNMGTMIEDMEIELRSNMDSLYISKTREIVSSMRNMR------LRAPVQGANFTNSLNQAVLGHGAKK 276          
BLAST of mRNA_Ecto-sp13_S_contig19453.6252.1 vs. uniprot
Match: A0A6U4L9K2_9STRA (F-actin-capping protein subunit beta n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L9K2_9STRA)

HSP 1 Score: 200 bits (509), Expect = 5.180e-60
Identity = 113/246 (45.93%), Postives = 154/246 (62.60%), Query Frame = 2
Query:    2 PLQKATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEAEGEADNAAGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSTKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLTREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAACLQSPFAAQLQGAVGQHGARR 739
            PL++ T   +G++YL C+YNRD  SYRSPWSN+YDPP++DGF P ++LR ME     AN L D+YRE+YF GG SSVYLW+ +  G           FAGCFL+ K +   G     G+W S HV++V        +A+YK+ TTV+LS D +    G+T LSG+LTR+K  T   + +  HL N+G +IE ME  +RS+M+ LYVQKTR+IV+S+RS   A+    ++ F   L  AV  HG  R
Sbjct:   50 PLEEGTCSASGKKYLMCDYNRDGDSYRSPWSNQYDPPLDDGFVPSEQLRNMEIQ---ANELFDSYRELYFEGGTSSVYLWDLDGAG-----------FAGCFLVKKSIESTGVV-KAGSWNSIHVIEVS-EQDGGKKASYKLTTTVLLSADVDKPECGSTDLSGSLTRQKARTCEINAEHTHLSNMGEIIEDMETEMRSNMNALYVQKTREIVNSIRSM--ATGPKQEADFVNSLNAAVMAHGDTR 277          
BLAST of mRNA_Ecto-sp13_S_contig19453.6252.1 vs. uniprot
Match: A0A7S2BI12_9STRA (F-actin-capping protein subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI12_9STRA)

HSP 1 Score: 195 bits (495), Expect = 5.550e-58
Identity = 115/247 (46.56%), Postives = 154/247 (62.35%), Query Frame = 2
Query:    2 PLQKATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEAEGEADNAAGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSTKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLTREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAACLQSPFAAQLQGAVGQHGARRQ 742
            PL++AT   T ++YL C+YNRD  SYRSPWSN Y+P ++DGF P D LR ME    DAN L D+YRE Y+ GGVSSVYLW+ +              FAGCFL+ K V G       G W+S HVV+V  + K   +ATYK+ +T+ML++  +  +VG ++LSG +T++KE T   +    H+ N+G MIE ME  +RS+MD LY+QKTR+IV+S+R   GA        F A L  AV  HGA R+
Sbjct:   48 PLEEATCSVTKKKYLLCDYNRDGDSYRSPWSNAYEPALDDGFQPSDALRAMEV---DANTLYDSYREQYYEGGVSSVYLWDLDT------------GFAGCFLVKKTVQGHAFVSD-GGWDSIHVVEV--TEKGDGKATYKLTSTLMLTMGVQKASVGDSNLSGCMTKQKELTLPVTEVKPHIVNIGSMIEDMEIDMRSNMDNLYIQKTREIVNSMRRVTGAPKQGQN--FTANLNAAVAAHGASRK 274          
BLAST of mRNA_Ecto-sp13_S_contig19453.6252.1 vs. uniprot
Match: F2UF43_SALR5 (F-actin-capping protein subunit beta n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UF43_SALR5)

HSP 1 Score: 187 bits (474), Expect = 6.310e-55
Identity = 109/235 (46.38%), Postives = 145/235 (61.70%), Query Frame = 2
Query:    2 PLQKATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEAEGEADNAAGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSTKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLTREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAACLQSPFAAQL 706
            PL+ A D  +GR YL C+YNRDA SYRSPWSNKYDPP+EDG  P D LR++E     AN   D YRE+Y+ GGVSSVYLW+ + EG           FAG  LI K   GDG +   G ++S HV +V   T   + ATYK+ +TVML ++   E  G   L G+LTR+ E+T T S  S H+ N+G M+E MEN +R+ +D +Y  KT+ +V+S+RS    S+  L+    A+L
Sbjct:   46 PLKIAKDEASGRDYLLCDYNRDADSYRSPWSNKYDPPLEDGAVPSDSLRELEIQ---ANQAFDTYRELYYEGGVSSVYLWDLQ-EG-----------FAGVILIKKV--GDGSKKIKGCYDSIHVFEVQ-ETSRGSNATYKLTSTVMLWLETNKETSGMMQLGGSLTRQAEKTLTVSQSSPHIANIGTMVEDMENNMRNTLDQIYFGKTKDVVNSLRSVNPLSSEGLKKDLQAEL 262          
BLAST of mRNA_Ecto-sp13_S_contig19453.6252.1 vs. uniprot
Match: A0A812SN25_SYMMI (F-actin-capping protein subunit beta n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SN25_SYMMI)

HSP 1 Score: 184 bits (466), Expect = 2.630e-54
Identity = 113/239 (47.28%), Postives = 152/239 (63.60%), Query Frame = 2
Query:   32 GRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEAEGEADNAAGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSTKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLTREKEET-KTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAACLQSP-FAAQLQGAVGQHGARRQ 742
            GR +L C+YNRD  SYRSPW+NKY PPI+DGF P ++LR ME    +AN L D+YRE+YF GG SSVYLW+       DN       FAGCFLI K V  D      G+W+S HVV+VV +   P +A+YK+ TTVML++    E VG+T++SG+LTR+ E T    + +  HL N+G +IE  E  +RS+++ LY+ KTR+IV+S+RS +      +QS    A L  AV  HG  R+
Sbjct:    1 GRSFLLCDYNRDGDSYRSPWTNKYFPPIDDGFLPSEKLRAMEM---EANELFDSYRELYFEGGTSSVYLWD------LDN------GFAGCFLIKKNVE-DNRFVNRGSWDSIHVVEVVETA--PKKASYKLTTTVMLTMSVAREEVGSTNMSGSLTRQVESTCDVDNNEKSHLANIGRLIEEQEGDMRSNLNELYILKTREIVNSIRSNKDGP---IQSASHVASLNAAVTGHGMSRK 218          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19453.6252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYI6_ECTSI2.780e-17296.20F-actin-capping protein subunit beta n=1 Tax=Ectoc... [more]
A0A6H5KTN9_9PHAE1.120e-8795.83F-actin-capping protein subunit beta n=1 Tax=Ectoc... [more]
A0A835YY13_9STRA5.870e-7051.29F-actin-capping protein subunit beta n=1 Tax=Tribo... [more]
A0A7S4A8I8_9STRA1.880e-6147.74F-actin-capping protein subunit beta n=2 Tax=Pelag... [more]
F0YCA6_AURAN4.190e-6147.97F-actin-capping protein subunit beta n=1 Tax=Aureo... [more]
A0A7S2F5N5_9STRA1.680e-6048.61F-actin-capping protein subunit beta n=1 Tax=Dicty... [more]
A0A6U4L9K2_9STRA5.180e-6045.93F-actin-capping protein subunit beta n=1 Tax=Phaeo... [more]
A0A7S2BI12_9STRA5.550e-5846.56F-actin-capping protein subunit beta n=1 Tax=Flore... [more]
F2UF43_SALR56.310e-5546.38F-actin-capping protein subunit beta n=1 Tax=Salpi... [more]
A0A812SN25_SYMMI2.630e-5447.28F-actin-capping protein subunit beta n=1 Tax=Symbi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19453contigEcto-sp13_S_contig19453:160..3154 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size795
Hectar predicted targeting categoryother localisation
Exons5
Cds size792
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462987.181138-CDS-Ecto-sp13_S_contig19453:159..3251681462987.181138-CDS-Ecto-sp13_S_contig19453:159..325Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19453 160..325 +
1681462987.1922927-CDS-Ecto-sp13_S_contig19453:895..11111681462987.1922927-CDS-Ecto-sp13_S_contig19453:895..1111Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19453 896..1111 +
1681462987.201687-CDS-Ecto-sp13_S_contig19453:1720..17741681462987.201687-CDS-Ecto-sp13_S_contig19453:1720..1774Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19453 1721..1774 +
1681462987.2101257-CDS-Ecto-sp13_S_contig19453:2413..25851681462987.2101257-CDS-Ecto-sp13_S_contig19453:2413..2585Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19453 2414..2585 +
1681462987.2186131-CDS-Ecto-sp13_S_contig19453:2969..31531681462987.2186131-CDS-Ecto-sp13_S_contig19453:2969..3153Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19453 2970..3153 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19453.6252.1prot_Ecto-sp13_S_contig19453.6252.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19453 160..3153 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19453.6252.1

>prot_Ecto-sp13_S_contig19453.6252.1 ID=prot_Ecto-sp13_S_contig19453.6252.1|Name=mRNA_Ecto-sp13_S_contig19453.6252.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp
AASKSDRPRDRSTLPEVRVQPRRELLPQPLEQQVRPAHRGRFHSGGSPET
DGGERRRRQHAPGRLPRGVLLRGGELRIPVGGGGGGRGRQRRGGRGELRG
VLLDPEARRRGRGRGPGRGLGKLARCPGRAEHEESDASDVQGQHHGDAVG
GPGGRGRRGDQPLGQPDQGKGGDQDLLDGQRPPPKPGRDDRGDGEHAQER
HGWPVRPENQTDRQQREKHSRGFGCLPAEPLRRPAAGGGWAARGEASRWR
PDERPQRQAWGAAF
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mRNA from alignment at Ecto-sp13_S_contig19453:160..3154+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19453.6252.1 ID=mRNA_Ecto-sp13_S_contig19453.6252.1|Name=mRNA_Ecto-sp13_S_contig19453.6252.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2995bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19453:160..3154+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCCGCTTCAAAAAGCGACAGACCCAGAGACCGGTCGACGCTACCTGAGGT GCGAGTACAACCGCGACGCGAGCTCCTACCGCAGCCCTTGGAGCAACAAG TACGACCCGCCCATCGAGGACGGTTTCACTCCGGGGGATCGCCTGAGACA GATGGAGGCGAGCGGCGTGTTTTACGTACAGGGGGGACTCGGGGCGGGGT GGGTGTGATTCATGTACAGATTTATGGAGAGTCCTTGGTGGTGCAGATCA TTCGCAGGATAAATCTTGTCTGCGCATGAGGAGGAGTGTGTGTGCCCGTC GTCGTGCTTGGGGCATTTCTTCTCCGATGCGTTCTCGTGCTGGCGAACGG GTTTGTATGCGTTTTGCGGCGTTTGCGTCAGAACACCCGGCTGGGCTATT TAGGCATCGGCCAAGACTTATCGTATGTTCATCACCGCTTCCCCCCCTCC CAAATCCGTCTCCGTGGAGATGGCCCGAGGTTTGCAGCCTACGTGTAGGG TAAGAAAGCAAACAAGCTGAATTTTTTAGCCTCCCTCCCTCCTTCACCCC TCTCCTCTCTCCCATCCTTCTTCTCCCCCTCAACACCCCTCTCCTCTCTC CCCATCCTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCGAAAACCCCCAAAAGCCCCCGGACCCCCCCCCCCCGGGGTCATT CTCCCGGGGGGGGGGGCCCCGATACCCGCACTGCAGGAAGACGCCAACAT GCTCCTGGACGCCTACCGCGAGGTGTACTTCTCCGGGGGGGTGAGCTCCG TATACCTGTGGGAGGAGGAGGCGGAGGGAGAGGCCGACAACGCCGCGGGG GCCGCGGGGAGCTTCGCGGGGTGCTTCTTGATCCTGAAGCGCGTCGGCGG GGACGGGGAAGAGGGCCCGGTAGGGGCCTGGGAAAGCTCGCACGTTGTCC AGGTAAGCCTAGGAAGTTCGTCACGGTGAGAGGTCTGTTGCGCGCACCCC TTCCCCGCCCCTTCTCGTCTTCGGTTTACTTCGGCTAAACACCTTGGCAC AACCAATGGCACAATCAAGTTGACTGACACAAGTTTGGGTAGGGAAAAGT ATTTAAACGTGACTCCGAGGTTTGAGGATGGCGACACGTTTTCGAGCCGC TCTGGCCTATCGTTGGTTCCTCGGGCGGGAGGAAAGTACCCTCGTGTAGG CGTTTTTGGTTTAGCCTGCCTCAGCAGCGTGATGCTCTGCTGCGTTAAAT GGCGACCGGTTGCGTGCGATACACTTAAGCGCCCGCACTTAAGAAGCTCT AGTTTTGGCAGAGGCTGGGGTTCTCACTGTATTCCTTGGGTCATGCTACG AATGGCCGCTATCTAGGTTTTAGCGTAGGGGTTCTGAGCTAGGCTCACGA CTGGTGCTCAAGCTCTGACTTTTTGAGTTGAACGAAATCCAACTTCTTAT CGAATGCCAAGCTGTCAAGCGCGGGTTCAATGTAACTGAATCCCGGTACG TGTGCTCGAAAAATCACACTTGTGCACCACGGTATCGATGAAACCCCTTA TTCTCGCGCAGGTCGTGCTGAGCACGAAGAATCCGACGCAAGCGACGTAC AAGGTCAACACCACGGTGAGCTTCGCTGGGCTTCGGGGAATTTTCTCACC CACCGGCCGTGTAAAATAGTTGCTTGGCACGGAACAGCAGTTGTGCATTT CGTGTGTCATACGCTTTTCCCCCCGCCCCTCCACGGTGATACGAGGTATA GTTGCTACGAGAGAGGGCGAGTCGCACATCTTCTGCGTGCCTCTCATGGT AGTGTTGAGCGATCACACCAACTTCCTCTGAGGCAGGAGGGCAAGTTCTC TCGCGCGTGACGCTGAACCGGTCGGCGCGACAACTTTGCTGCTGCTGCTG CTGTCCGACGTCCAACCCCCCCCCTTGATATTCCCGTTCGTTTTGTTCCA AACGACGTCAAAGTCGACTAACGGGCGTTACGTGACCCTTCACCCGGACC CTACAACCGCATTTTTTTTTACTAAATGCTGAGTAACAACCCCCCAAACG ACGACAAAGTATACGGGCAGTTTTTGTTGGATGTGACCCCCCTAAACACG CCCGAACCACTGCCTCAGGATGAGCTAACCACTCCCTTGAGCTTTCCCCT TCTCATCCCAAACCACCCGATGTATCAAAAGCCACGACCTCTATCCATCA CGTATCATCATCGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTACGCGT GCAGGTGATGCTGTCGGTGGACCCGGAGGACGAGGCCGTCGGGGCGACCA GCCTCTCGGGCAACCTGACCAGGGAAAAGGAGGAGACCAAGACCTTCTCG ACGGACAGCGACCACCTCCAAAACCTGGGCGTGATGATCGAGGCGATGGA GAACACGCTCAGGAGCGACATGGATGGTAGGAGCCGCGTCAGTCTACCAC CATATCTCAGGACGAAGAGATTTCTTCAACCCATTTTCAGACAGAGTTTT GCAATTTCGGCAGGGGATTCTTGCCGTGCTTTTCTTGTATGTATGCCTAG TATGCAACTACATCGCGTATTTCCGTCTAGGTGTTTTGCAACCTGTCACT TTCTCAAACAGACTCGCAATTTTTTTCGACCGCCCGGAACGCGCCGCCCC CCTCCGCCCCCCCATCGAGCCATCTTTGGCAAAGTAGATGGGAAGGAACG ATTGGCCATCGGTGATCGGTCCTGTGGAAACAATGCTCCGTCGAGTGGTC AATATTCTAACCGCTACGGCATGCAAACATAAGAGTTCCCCCCCCCACCC CCGTCTGCAGGCCTGTACGTCCAGAAAACCAGACAGATCGTCAGCAGCGT GAGAAGCACTCGAGGGGCTTCGGCTGCCTGCCTGCAGAGCCCCTTCGCCG CCCAGCTGCAGGGGGCGGTTGGGCAGCACGGGGCGAGGCGTCAAGGTGGC GACCTGATGAGCGCCCTCAACGCCAAGCTTGGGGTGCCGCCTTCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19453:160..3154+

>mRNA_Ecto-sp13_S_contig19453.6252.1 ID=mRNA_Ecto-sp13_S_contig19453.6252.1|Name=mRNA_Ecto-sp13_S_contig19453.6252.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19453:160..3154+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCCGCTTCAAAAAGCGACAGACCCAGAGACCGGTCGACGCTACCTGAGGT
GCGAGTACAACCGCGACGCGAGCTCCTACCGCAGCCCTTGGAGCAACAAG
TACGACCCGCCCATCGAGGACGGTTTCACTCCGGGGGATCGCCTGAGACA
GATGGAGGCGAGCGGCGAAGACGCCAACATGCTCCTGGACGCCTACCGCG
AGGTGTACTTCTCCGGGGGGGTGAGCTCCGTATACCTGTGGGAGGAGGAG
GCGGAGGGAGAGGCCGACAACGCCGCGGGGGCCGCGGGGAGCTTCGCGGG
GTGCTTCTTGATCCTGAAGCGCGTCGGCGGGGACGGGGAAGAGGGCCCGG
TAGGGGCCTGGGAAAGCTCGCACGTTGTCCAGGTCGTGCTGAGCACGAAG
AATCCGACGCAAGCGACGTACAAGGTCAACACCACGGTGATGCTGTCGGT
GGACCCGGAGGACGAGGCCGTCGGGGCGACCAGCCTCTCGGGCAACCTGA
CCAGGGAAAAGGAGGAGACCAAGACCTTCTCGACGGACAGCGACCACCTC
CAAAACCTGGGCGTGATGATCGAGGCGATGGAGAACACGCTCAGGAGCGA
CATGGATGGCCTGTACGTCCAGAAAACCAGACAGATCGTCAGCAGCGTGA
GAAGCACTCGAGGGGCTTCGGCTGCCTGCCTGCAGAGCCCCTTCGCCGCC
CAGCTGCAGGGGGCGGTTGGGCAGCACGGGGCGAGGCGTCAAGGTGGCGA
CCTGATGAGCGCCCTCAACGCCAAGCTTGGGGTGCCGCCTTC
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