prot_Ecto-sp13_S_contig19439.6243.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19439.6243.1
Unique Nameprot_Ecto-sp13_S_contig19439.6243.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length167
Homology
BLAST of mRNA_Ecto-sp13_S_contig19439.6243.1 vs. uniprot
Match: A0A6H5L6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K9_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 7.730e-97
Identity = 160/166 (96.39%), Postives = 161/166 (96.99%), Query Frame = 0
Query:    2 LLALHCVSHNQNAFQDFMLHAAPVTRRQRQRGGGGVDMEEYARRMTSTRCDGDHITLQALCDALKVNINVVKWTRDDGWYPRTVTSATSNDAAAAXXXXAAVAEEPRRPSQSVFVADTLRPRAVSSLDARARDLQLQGRTLWLSLHGEAHFRSLRVRDPVTEAEAA 167
            LLALHCVSHNQNAFQDFMLHAAPVTRRQRQRGGGGVDMEEYARRMTSTRCDGDHITLQALCDALKVNINVVKWTRDDGWYPR VTSATSNDAAAA    AAVAEEPRRPS+SVFVADTLRPRAVSSLDARARDLQLQGRTLWLSLHGEAHFRSLRVRDPVTEAEAA
Sbjct:   97 LLALHCVSHNQNAFQDFMLHAAPVTRRQRQRGGGGVDMEEYARRMTSTRCDGDHITLQALCDALKVNINVVKWTRDDGWYPRPVTSATSNDAAAATNPPAAVAEEPRRPSRSVFVADTLRPRAVSSLDARARDLQLQGRTLWLSLHGEAHFRSLRVRDPVTEAEAA 262          
BLAST of mRNA_Ecto-sp13_S_contig19439.6243.1 vs. uniprot
Match: D7FVY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY3_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 6.880e-96
Identity = 157/167 (94.01%), Postives = 162/167 (97.01%), Query Frame = 0
Query:    1 RLLALHCVSHNQNAFQDFMLHAAPVTRRQRQRGGGGVDMEEYARRMTSTRCDGDHITLQALCDALKVNINVVKWTRDDGWYPRTVTSATSNDAAAAXXXXAAVAEEPRRPSQSVFVADTLRPRAVSSLDARARDLQLQGRTLWLSLHGEAHFRSLRVRDPVTEAEAA 167
            RLLALHCVSHNQNAFQDFMLHAAPVTRRQRQRGGGGVDMEEYARRMTS+RCDGDHITLQALCDALKVNINVVKWTRDDGWYPRTV SAT+NDAA+A    AAVAEEPRRPS+SVFVADTLRPRAV+SLDARARDLQLQGRTLWLSLHGEAHFRSLRVRDPVTEAEAA
Sbjct:  134 RLLALHCVSHNQNAFQDFMLHAAPVTRRQRQRGGGGVDMEEYARRMTSSRCDGDHITLQALCDALKVNINVVKWTRDDGWYPRTVASATTNDAASASNPPAAVAEEPRRPSRSVFVADTLRPRAVASLDARARDLQLQGRTLWLSLHGEAHFRSLRVRDPVTEAEAA 300          
BLAST of mRNA_Ecto-sp13_S_contig19439.6243.1 vs. uniprot
Match: A0A7S1C001_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C001_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.190e-20
Identity = 57/175 (32.57%), Postives = 90/175 (51.43%), Query Frame = 0
Query:    1 RLLALHCVSHNQNAFQDFMLHAAPVTRRQRQRGGGGVDMEEYARRMTSTRCDGDHITLQALCDALKVNINVVKWTRDDGWYPRTVTSATSN-----------------DAAAAXXXXAAVAEEPRRPSQSVFVADTLRPRAVSSLDARARDLQ--LQGRTLWLSLHGEAHFRSLR 156
            R L LH +SHN   ++ F++     TR   Q GG GVD+  Y   M+ +  DGDH+TLQALCD LK+ I +VK          T    TS+                 D  +       + ++    S+++++++ ++PR +  +D R +D+Q  ++GR +WLS  G+AHFR LR
Sbjct:  187 RKLVLHAISHNPECYRHFLVVPGRRTRSSSQEGGTGVDLTHYLHTMSKSSTDGDHVTLQALCDVLKITIRIVKPVTHHSSTQSTSYDGTSDYLSDDSSSTFSSNPPVLDPLSLSTGVFPIIDKCSSFSRNIYISEEMQPRRLERIDRRIQDVQNLVRGRLVWLSHVGDAHFRYLR 361          
BLAST of mRNA_Ecto-sp13_S_contig19439.6243.1 vs. uniprot
Match: A0A7S1CKW7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKW7_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 5.890e-20
Identity = 64/172 (37.21%), Postives = 86/172 (50.00%), Query Frame = 0
Query:    1 RLLALHCVSHNQNAFQDFMLHAAPVTRRQRQRGGGGVDMEEYARRMTSTRCDGDHITLQALCDALKVNINVVKWTRDDGWYPRTVTSATSNDAAAAXXXXAAVAEEPRRPSQSVFVADTLRPRAVS-SLDARARD----LQLQGRTLWLSLHGEAHFRSLRVRDPVTEAEAA 167
            R L +  + ++  A+Q F+LHA   TRRQ+  GG  VD E Y  RM+  RCDGDH+TLQAL DA    +NVVKWT   G                                + V+VA  +RPR +   +  R+ D    +   GR++WLSL+GEAH+RSL +   V  A  A
Sbjct:  169 RRLVIRTMRNSVGAYQMFLLHAHARTRRQQGIGGVSVDFERYLSRMSEERCDGDHVTLQALADATGCELNVVKWTDGAGGE-----------------------------GEGVYVAQPVRPRQLRRKVCPRSADGSPLVNGSGRSVWLSLYGEAHYRSLCLAPGVAGAGGA 311          
BLAST of mRNA_Ecto-sp13_S_contig19439.6243.1 vs. uniprot
Match: A0A7S0CDU1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDU1_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.940e-19
Identity = 74/216 (34.26%), Postives = 100/216 (46.30%), Query Frame = 0
Query:    1 RLLALHCVSHNQNAFQDFMLHAAPV-TRRQRQRGGGGVDMEEYARRMTSTRCDGDHITLQALCDALKVNINVVKWTR----------------DDGWYPRTVT--------------------------------------SATSNDAAAAXXXXAAVAEEPRRPSQSVFVADTLRPRAVSSLDARARDLQ--LQGRTLWLSLH---GEAHFRSLR 156
            R LALH +SHN + +QDF+  A    TR Q   GG GVDM+ Y   M+  +CDGD ITLQALCDALK+ I VVK  +                DD  Y R +                                       S+TS    +       + E P  P   + V++ +RPR +S +D+R +++Q  ++GR +WLS H   GEAHFR LR
Sbjct:  222 RRLALHTISHNPHMYQDFLTTAGGRRTRSQSTTGGRGVDMKSYLSSMSDPKCDGDAITLQALCDALKITIRVVKPVKQQGRNNDVYINVYSGNDDEIYRRHLLRLLHERMQFEVTESIASLSDECDSEDDCPSMESTECSISSTSCPFESCSVDNVLLNENPTNPKSYLSVSEEIRPRRLSRIDSRVKEVQSHVRGRLIWLS-HVGPGEAHFRYLR 436          
BLAST of mRNA_Ecto-sp13_S_contig19439.6243.1 vs. uniprot
Match: A0A7S1XTZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTZ1_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.390e-19
Identity = 64/167 (38.32%), Postives = 83/167 (49.70%), Query Frame = 0
Query:    1 RLLALHCVSHNQNAFQDFMLHAAPVTRRQRQRGGGGVDMEEYARRMTSTRCDGDHITLQALCDALKVNINVVKWTR------DDGWYPRTVTSATSNDAAAAXXXXAAVAEEPRRPSQSVFVADTLRPRA-VSSLDARARDLQLQGRTLWLSLHG-EAHFRSLRVRD 159
            R LAL  +  +   +QDFML AAP+TR QR RGG GV M +Y  RM+   CDGDH+TLQALCDAL+V + V++W         D +  R + +                    R     +  +  L PR     L       ++  R LWLS  G EAHFRSLR+ D
Sbjct:  179 RHLALDTIRSDPAHYQDFMLAAAPLTRAQRSRGGKGVRMHDYLSRMSDLGCDGDHLTLQALCDALRVRVRVLRWAPLDIAGGQDHYLERDLLT--------------------RGRKIGLIHSHELHPRERPGDLSPLGEGFEVPLRVLWLSQVGSEAHFRSLRLLD 325          
BLAST of mRNA_Ecto-sp13_S_contig19439.6243.1 vs. uniprot
Match: I2CPN9_NANGC (OTU domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPN9_NANGC)

HSP 1 Score: 63.5 bits (153), Expect = 2.920e-9
Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 0
Query:    1 RLLALHCVSHNQNAFQDFMLHAAPVTRRQRQRGGGGVDMEEYARRMTSTRCDGDHITLQALCDALKVNINVV 72
            R LAL+ ++ ++  F+ FML   P TRRQ +  G  VD   Y  +M+  R DGDH+TLQAL DAL+  I V+
Sbjct:  114 RQLALYVIATHEAHFRSFMLPPNPRTRRQNRTAGESVDFSRYLEKMSDPRTDGDHLTLQALADALQCPIRVL 185          
BLAST of mRNA_Ecto-sp13_S_contig19439.6243.1 vs. uniprot
Match: A0A4D9D067_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D067_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 5.430e-8
Identity = 49/143 (34.27%), Postives = 65/143 (45.45%), Query Frame = 0
Query:   20 LHAAPV--TRRQRQRGGGGVDMEEYARRMTSTRCDGDHITLQALCDALKVNINVVKWTRDDGWYPRTVTSATSNDAAAAXXXXAAVAEEPRRPSQSVFVADTLRPRAVSSLDARARDLQLQGRTLWLSLHGEAHFRSLRVRDP 160
            LHA P   TRRQ +  G  VD   Y  +M+  R DGDH+TLQAL DAL+  I V+         P  +   T           +++   P           +L P  +  L+     L++  R LWL+L GEAHFRSL    P
Sbjct:  126 LHAPPNPRTRRQNRTAGESVDFSRYLEKMSDPRTDGDHLTLQALADALQCPIRVLSLV------PAPLAEKTLAHCIKTTMVLSSLLPGP----------PSLPPSPLPPLER----LRVPRRELWLTLRGEAHFRSLLPSPP 248          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19439.6243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5L6K9_9PHAE7.730e-9796.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVY3_ECTSI6.880e-9694.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1C001_9STRA3.190e-2032.57Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]
A0A7S1CKW7_9STRA5.890e-2037.21Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S0CDU1_9STRA1.940e-1934.26Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1XTZ1_9STRA3.390e-1938.32Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
I2CPN9_NANGC2.920e-945.83OTU domain-containing protein (Fragment) n=1 Tax=N... [more]
A0A4D9D067_9STRA5.430e-834.27Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019400Peptidase C65, otubainPFAMPF10275Peptidase_C65coord: 1..91
e-value: 4.2E-5
score: 23.1
NoneNo IPR availableGENE3D3.90.70.80coord: 1..104
e-value: 1.4E-7
score: 33.2
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 1..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19439contigEcto-sp13_S_contig19439:1691..3278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19439.6243.1mRNA_Ecto-sp13_S_contig19439.6243.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19439 1689..3278 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19439.6243.1 ID=prot_Ecto-sp13_S_contig19439.6243.1|Name=mRNA_Ecto-sp13_S_contig19439.6243.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp
RLLALHCVSHNQNAFQDFMLHAAPVTRRQRQRGGGGVDMEEYARRMTSTR
CDGDHITLQALCDALKVNINVVKWTRDDGWYPRTVTSATSNDAAAASNPP
AAVAEEPRRPSQSVFVADTLRPRAVSSLDARARDLQLQGRTLWLSLHGEA
HFRSLRVRDPVTEAEAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019400Peptidase_C65_otubain
IPR038765Papain-like_cys_pep_sf