prot_Ecto-sp13_S_contig19330.6200.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19330.6200.1
Unique Nameprot_Ecto-sp13_S_contig19330.6200.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length36
Homology
BLAST of mRNA_Ecto-sp13_S_contig19330.6200.1 vs. uniprot
Match: A0A6H5KRG7_9PHAE (GP-PDE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRG7_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 3.200e-15
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
Query:    1 MPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIE 36
            MPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIE
Sbjct:  134 MPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIE 169          
BLAST of mRNA_Ecto-sp13_S_contig19330.6200.1 vs. uniprot
Match: A0A2E5ZV33_9EURY (GP-PDE domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E5ZV33_9EURY)

HSP 1 Score: 48.5 bits (114), Expect = 1.620e-5
Identity = 19/30 (63.33%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    6 EAVRLGVDVIEFDVLTTSDGVVICHHDPLI 35
            EA+ LGVD+IEFDV +T DGV++CHHD  +
Sbjct:   26 EAIELGVDMIEFDVRSTKDGVLVCHHDSTV 55          
BLAST of mRNA_Ecto-sp13_S_contig19330.6200.1 vs. uniprot
Match: A0A1J5U4N1_9ARCH (GP-PDE domain-containing protein n=1 Tax=Marine Group III euryarchaeote CG-Epi3 TaxID=1888997 RepID=A0A1J5U4N1_9ARCH)

HSP 1 Score: 47.4 bits (111), Expect = 4.270e-5
Identity = 18/31 (58.06%), Postives = 26/31 (83.87%), Query Frame = 0
Query:    6 EAVRLGVDVIEFDVLTTSDGVVICHHDPLIE 36
            EA++LGVD+IEFDV +T DG ++CHHD  ++
Sbjct:   26 EAIKLGVDMIEFDVRSTKDGRLVCHHDATVD 56          
BLAST of mRNA_Ecto-sp13_S_contig19330.6200.1 vs. uniprot
Match: A0A2V7ELW2_9BACT (GP-PDE domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7ELW2_9BACT)

HSP 1 Score: 47.4 bits (111), Expect = 4.300e-5
Identity = 19/35 (54.29%), Postives = 25/35 (71.43%), Query Frame = 0
Query:    1 MPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLI 35
            +P+FL A+ LG D IE DV  T DG+V+ HHD L+
Sbjct:   32 IPAFLRAIELGADAIELDVHATRDGIVVVHHDELV 66          
BLAST of mRNA_Ecto-sp13_S_contig19330.6200.1 vs. uniprot
Match: A0A7X7E3S1_9BACT (Glycerophosphodiester phosphodiesterase n=1 Tax=Fibrobacter sp. TaxID=35828 RepID=A0A7X7E3S1_9BACT)

HSP 1 Score: 47.0 bits (110), Expect = 5.730e-5
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    1 MPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLI 35
            M SF EAV+LG D+IEFDV  T D +++ HHDP I
Sbjct:    1 MKSFHEAVKLGTDMIEFDVRRTRDRILVAHHDPHI 35          
BLAST of mRNA_Ecto-sp13_S_contig19330.6200.1 vs. uniprot
Match: A0A2H0P5L7_9DELT (GP-PDE domain-containing protein n=1 Tax=Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_49_13 TaxID=1973976 RepID=A0A2H0P5L7_9DELT)

HSP 1 Score: 46.6 bits (109), Expect = 8.510e-5
Identity = 20/35 (57.14%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MPSFLEAVRLGVDVIEFDVLTTSDGV-VICHHDPL 34
            +PSF++AV LGVD +EFD+L+T+DG+ ++CH D L
Sbjct:   23 IPSFIKAVELGVDGVEFDLLSTADGLPIVCHDDNL 57          
BLAST of mRNA_Ecto-sp13_S_contig19330.6200.1 vs. uniprot
Match: A0A118JZC1_CYNCS (Glycerophosphodiester phosphodiesterase (Fragment) n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JZC1_CYNCS)

HSP 1 Score: 46.6 bits (109), Expect = 9.070e-5
Identity = 17/35 (48.57%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    2 PSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIE 36
            PS+L A++ G D IE D+L + DGV++CHHD +++
Sbjct:   61 PSYLRAIKEGADFIETDILVSKDGVLMCHHDVILD 95          
BLAST of mRNA_Ecto-sp13_S_contig19330.6200.1 vs. uniprot
Match: UPI000D62A8EE (glycerophosphodiester phosphodiesterase GDPD6-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62A8EE)

HSP 1 Score: 46.6 bits (109), Expect = 9.120e-5
Identity = 17/35 (48.57%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    2 PSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIE 36
            PS+L A++ G D IE D+L + DGV++CHHD +++
Sbjct:   61 PSYLRAIKEGADFIETDILVSKDGVLMCHHDVILD 95          
BLAST of mRNA_Ecto-sp13_S_contig19330.6200.1 vs. uniprot
Match: A0A0D3EGZ0_BRAOL (Glycerophosphodiester phosphodiesterase n=21 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3EGZ0_BRAOL)

HSP 1 Score: 46.6 bits (109), Expect = 9.130e-5
Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 0
Query:    2 PSFLEAVRLGVDVIEFDVLTTSDGVVICHHD 32
            PS++ A+  G D IE D+L+T DGV+ICHHD
Sbjct:   63 PSYMRAIEEGADFIESDILSTKDGVLICHHD 93          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19330.6200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5KRG7_9PHAE3.200e-15100.00GP-PDE domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A2E5ZV33_9EURY1.620e-563.33GP-PDE domain-containing protein n=1 Tax=Euryarcha... [more]
A0A1J5U4N1_9ARCH4.270e-558.06GP-PDE domain-containing protein n=1 Tax=Marine Gr... [more]
A0A2V7ELW2_9BACT4.300e-554.29GP-PDE domain-containing protein n=1 Tax=Gemmatimo... [more]
A0A7X7E3S1_9BACT5.730e-560.00Glycerophosphodiester phosphodiesterase n=1 Tax=Fi... [more]
A0A2H0P5L7_9DELT8.510e-557.14GP-PDE domain-containing protein n=1 Tax=Deltaprot... [more]
A0A118JZC1_CYNCS9.070e-548.57Glycerophosphodiester phosphodiesterase (Fragment)... [more]
UPI000D62A8EE9.120e-548.57glycerophosphodiester phosphodiesterase GDPD6-like... [more]
A0A0D3EGZ0_BRAOL9.130e-558.06Glycerophosphodiester phosphodiesterase n=21 Tax=B... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR030395Glycerophosphodiester phosphodiesterase domainPFAMPF03009GDPDcoord: 1..35
e-value: 1.6E-11
score: 44.5
IPR030395Glycerophosphodiester phosphodiesterase domainPROSITEPS51704GP_PDEcoord: 1..36
score: 13.842
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilyGENE3D3.20.20.190coord: 1..36
e-value: 6.8E-11
score: 44.4
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilySUPERFAMILY51695PLC-like phosphodiesterasescoord: 1..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19330contigEcto-sp13_S_contig19330:4..111 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19330.6200.1mRNA_Ecto-sp13_S_contig19330.6200.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19330 4..129 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19330.6200.1 ID=prot_Ecto-sp13_S_contig19330.6200.1|Name=mRNA_Ecto-sp13_S_contig19330.6200.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=36bp
MPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR030395GP_PDE_dom
IPR017946PLC-like_Pdiesterase_TIM-brl