prot_Ecto-sp13_S_contig19313.6196.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19313.6196.1
Unique Nameprot_Ecto-sp13_S_contig19313.6196.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length187
Homology
BLAST of mRNA_Ecto-sp13_S_contig19313.6196.1 vs. uniprot
Match: D7FKG0_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG0_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 1.710e-118
Identity = 176/186 (94.62%), Postives = 182/186 (97.85%), Query Frame = 0
Query:    1 NGNTFNNWSAFNEFEVCGEEVESNALFSGVKAAKKKLAQLEGDSVCVEPVKLAVQNAHVTDSSDSNNVKSIFDLNFHTWWASANTQNEDPMENAKIRLRFQGDQKVSYVKIAFFDGHLASYHMDLYKRAAADTEWTGVLTGQVVEAVSTFQTFTIEETGVNVLYIVGLGNDVGDKFKVSEVEVYGC 186
            NGNTFNNWSAFNEFEVCGEEVESNALFSG++AAKKKLAQLEGDSVCVEPVKLAVQNAHVTDSSDSNNV+SIFDLNFHTWWASANTQNE+PMENAKIRL FQGDQ VSYVKIAFFDGHLASYHMDLYKRAAA+ EWT VLTGQVVEAVSTFQTFTIEETGVNVLYIVGLGNDVG+KFKVSEVEVYGC
Sbjct:  581 NGNTFNNWSAFNEFEVCGEEVESNALFSGIRAAKKKLAQLEGDSVCVEPVKLAVQNAHVTDSSDSNNVRSIFDLNFHTWWASANTQNENPMENAKIRLHFQGDQNVSYVKIAFFDGHLASYHMDLYKRAAANKEWTSVLTGQVVEAVSTFQTFTIEETGVNVLYIVGLGNDVGNKFKVSEVEVYGC 766          
BLAST of mRNA_Ecto-sp13_S_contig19313.6196.1 vs. uniprot
Match: A0A6H5KWV6_9PHAE (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV6_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 8.150e-46
Identity = 92/186 (49.46%), Postives = 116/186 (62.37%), Query Frame = 0
Query:    2 GNTFNNWSAFNEFEVCGEEVE-SNALFSGVKAAKKKLAQLEGDSVCVEPVKLAVQNAHVTDSSDSNNVKSIFDLNFHTWWASANTQNEDPMENAKIRLRFQGDQKVSYVKIAFFDGHLASYHMDLYKRAAADTEWTGVLTGQVVEAVSTFQTFTIEETGVNVLYIVGLGNDVGDKFKVSEVEVYGC 186
            GN+FNNWSAF E EVC E  E SNALF G++A   +L  L G  VC  PVKLA  N H   +S  +NVK +FD NF T W++ NTQN   + N K+   F GD +VS V+I+F+DG LA  +  +Y + A+D  WT VL  +        QTFT+E  GV+ LY+VG GNDVG   K SE+ VYGC
Sbjct:  503 GNSFNNWSAFTELEVCVEAAEESNALFGGLQALDSELEALAG-GVCDAPVKLAPVNVH---ASGEDNVKVVFDGNFDTRWSTTNTQNASDLSNDKVIFTFGGDMRVSTVQISFYDGDLAHQYFSIYTQRASDRSWTPVLLKEQAAMNVALQTFTLEVDGVHKLYVVGNGNDVGAYSKFSEIAVYGC 684          
BLAST of mRNA_Ecto-sp13_S_contig19313.6196.1 vs. uniprot
Match: A0A6H5KRG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRG5_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 2.610e-45
Identity = 83/182 (45.60%), Postives = 117/182 (64.29%), Query Frame = 0
Query:    5 FNNWSAFNEFEVCGEEVESNALFSGVKAAKKKLAQLEGDSVCVEPVKLAVQNAHVTDSSDSNNVKSIFDLNFHTWWASANTQNEDPMENAKIRLRFQGDQKVSYVKIAFFDGHLASYHMDLYKRAAADTEWTGVLTGQVVEAVSTFQTFTIEETGVNVLYIVGLGNDVGDKFKVSEVEVYGC 186
            FNNW+AF E EVC +  E+NALF G++A +++L  L G+ VC  P KL    A  + S D   V+ +FD N+ TWW++ NTQ+E  + N  ++L F GD +VS++ IAFFDGHLA  +  +Y ++A    WT V+  +        QTF+I+  GV+ +Y+VG GNDVG   K+SEVEVYGC
Sbjct:  529 FNNWTAFTEVEVCAKSAETNALFGGIEAIREELGMLAGE-VCSAPTKLVPTGAKASRSDD---VRVLFDGNYETWWSTINTQSESDLSNDMVQLTFAGDTRVSFLNIAFFDGHLAHQYFFVYVQSAHAYTWTPVMLNEQAATQVGMQTFSIDLDGVHKIYVVGKGNDVGAYSKLSEVEVYGC 706          
BLAST of mRNA_Ecto-sp13_S_contig19313.6196.1 vs. uniprot
Match: D7FRK8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK8_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 2.580e-42
Identity = 86/186 (46.24%), Postives = 115/186 (61.83%), Query Frame = 0
Query:    2 GNTFNNWSAFNEFEVCGEEV-ESNALFSGVKAAKKKLAQLEGDSVCVEPVKLAVQNAHVTDSSDSNNVKSIFDLNFHTWWASANTQNEDPMENAKIRLRFQGDQKVSYVKIAFFDGHLASYHMDLYKRAAADTEWTGVLTGQVVEAVSTFQTFTIEETGVNVLYIVGLGNDVGDKFKVSEVEVYGC 186
            GN+FNNWSAF E EVC E   ESNALF G++A   +L  L G +VC  P KL+  + H +   D   V+ +FD NF T W++ NTQNE  + N K+   F GD  VS V+I+F+DG LA     +Y ++A+D  WT VL  +        QTFT++  GV+ LY+VG GN+VG   K SE+EV+GC
Sbjct:  544 GNSFNNWSAFTELEVCVEAAAESNALFGGLQALDSELEALAG-AVCDAPAKLSPVSVHASGQDD---VRVVFDGNFDTRWSTTNTQNESDLSNDKVIFTFGGDMMVSTVQISFYDGDLAHQIFSIYTQSASDRSWTPVLLEEHAARDVALQTFTLDMDGVHKLYVVGKGNEVGAYSKFSEIEVHGC 725          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19313.6196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FKG0_ECTSI1.710e-11894.62FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KWV6_9PHAE8.150e-4649.46F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KRG5_9PHAE2.610e-4545.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRK8_ECTSI2.580e-4246.24FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 49..186
e-value: 8.7E-11
score: 43.9
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 56..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19313contigEcto-sp13_S_contig19313:2..1082 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19313.6196.1mRNA_Ecto-sp13_S_contig19313.6196.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19313 2..1082 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19313.6196.1 ID=prot_Ecto-sp13_S_contig19313.6196.1|Name=mRNA_Ecto-sp13_S_contig19313.6196.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp
NGNTFNNWSAFNEFEVCGEEVESNALFSGVKAAKKKLAQLEGDSVCVEPV
KLAVQNAHVTDSSDSNNVKSIFDLNFHTWWASANTQNEDPMENAKIRLRF
QGDQKVSYVKIAFFDGHLASYHMDLYKRAAADTEWTGVLTGQVVEAVSTF
QTFTIEETGVNVLYIVGLGNDVGDKFKVSEVEVYGC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf