prot_Ecto-sp13_S_contig1925.6165.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1925.6165.1
Unique Nameprot_Ecto-sp13_S_contig1925.6165.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length894
Homology
BLAST of mRNA_Ecto-sp13_S_contig1925.6165.1 vs. uniprot
Match: A0A6H5JD13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD13_9PHAE)

HSP 1 Score: 1256 bits (3251), Expect = 0.000e+0
Identity = 731/910 (80.33%), Postives = 776/910 (85.27%), Query Frame = 0
Query:    1 MGTFCESWDSNWMDGSCDGFQNNSDDSDGGADAFEAALQPLPAWDGLAFSTDKGNAESDIVWGTRQRARYKSAPSPSREHFPGVLDDL-----NLGPAEAGDCTGNVSSTLRTTKLAGDPDRMHLSIGRAWSVTRSTSPEPKPKGHDLETGDTLTHVIRLHRSGSVVVERKGKPNARGGIIGDAGVLRPRQHAGEKNFYPEEEQFWQERCPREADNAVVVQQTAPTASPRVT--NGRAASYDYFTAGAAHRADRPAGKSVPPDGNGPLRGTVPGRPTGGRKTTRFEEEVNDCVQEKCATQGIHMPPPSPRRTARIGRSARAKAITERKRNKSQRRRFPSLRDAESVLRGVLESVEDARST---------EEDSPSAMRTPQEARSSVLRQKVADLVRDETHEERGEYSTGKHGDSIGGTSPGKHRAQTSRQYDGDNGPSPLGICGMGNCSGFGERGAMARNESRQVDRHEQRQCFEHKRA-GVAHSEEXXXXXXXGDDAQESAGRVAELSRRIAMRCXXXXXXXXXREHYHTRLFQEQLRGVRLGAQQVARRTIHNERIRQKQLLLETQERFEEKERGLVAKLERAEESWKVERESLHANTAAAKSEMEKCRRQTRAAAEAGINATKEALEKQRLDLQRGWAEEKGGLRRAAEDALRRAMEGNARAREESAVKAQTAQDSLDAQVRSWKAKAETAERRAAEEREQRRSLEAGVKGALAQEVEKAXXXXXAVLRDLRTKTETDRAKHAEEIERLQEEHRAALLRVHQDKKSLFEVARRQWEEEMQELRQEAAAKAENAATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRCQQQQGPSGMAPRSKQDNSTLSPMPRGSYSPRPLLTETAGARSCLDGVEAEMGSQTSPSSVLATPSINANPDKG 893
            MGTFCESWDSNWMDGSC GFQNN+DDSDGGADAFEAALQPLPAWDGLA+ST++GNAE+DIVWGTRQ  R +SA SPS EH PG+LDDL     N+GP EAGDCT NVSSTLRTTKLAGDPD MH  IG+AWS TRSTSPEPKPKGHDLETGD LTHVIRLHR+GSVVVERKGKPNARGGIIGDAG   PRQHA E+  Y EEE+FWQ RCP EADNAVVVQ+TAPTASPRVT  NGRAA+YDYF A AAH A  PAGKSVPP GN  LRG  PG+PTG R TTRFEE+ + CVQE CATQG H+PPP  RRTAR G SARAKAITERKR+K+QRRR  SLRDAESVLRGVLESVEDA ST         EEDS S M TPQ  R SVLRQ VA+L RDE HEERGE STGKHG S+GGTSP K+RAQTSR YDGDN PSPLGI  +GN SG  ERGAMAR  S+QVD+HEQRQC E +RA G+AHSEEXXXXXX G   QESAGRVAELSRRIAMRCXXXXXXXXX     TRLFQEQLR VRLGAQQVARRTIH+ERIRQKQLLLETQ+RFEEKERGLVAKL  AEESWKVERESL+ANTAAAKSE+EKCRRQ RAAAEAG+NA++EALEKQRLDLQRGWAEEKGGLRRAAEDALRRAMEGNARAREE+A KAQ AQDSLDAQVRSWKAK ETAERRAAEERE+R+ LEAGVKGALAQE    XXXXX                     ERLQEEHRAALLRVHQDKKSLFE ARR+WE+EMQELR+EA AKAE+AATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRCQQQQ PSGMAPRSKQDNSTLSP+PRGSYS RPL++ETAGARSCLDGVEAEMGSQTSPSSVL TPSINANP KG
Sbjct:    1 MGTFCESWDSNWMDGSCGGFQNNADDSDGGADAFEAALQPLPAWDGLAYSTNRGNAENDIVWGTRQSDRDRSAASPSPEHHPGMLDDLDLGAVNVGPDEAGDCTDNVSSTLRTTKLAGDPDGMHPPIGQAWSETRSTSPEPKPKGHDLETGDNLTHVIRLHRTGSVVVERKGKPNARGGIIGDAGAFGPRQHAAEQYSYAEEERFWQARCPPEADNAVVVQRTAPTASPRVTKANGRAANYDYFAAEAAHLAGSPAGKSVPPGGNSSLRGRGPGQPTGRRTTTRFEEKADACVQENCATQGTHVPPP--RRTARKGCSARAKAITERKRDKAQRRRLQSLRDAESVLRGVLESVEDAPSTGEVCRKTAAEEDSYSTMDTPQGERFSVLRQNVANLFRDEAHEERGESSTGKHGGSMGGTSPSKYRAQTSRHYDGDNWPSPLGIRRVGNRSGSRERGAMARGTSQQVDQHEQRQCIEDERAEGLAHSEEXXXXXX-GXXXQESAGRVAELSRRIAMRCXXXXXXXXXXXXSQTRLFQEQLRSVRLGAQQVARRTIHDERIRQKQLLLETQQRFEEKERGLVAKLNLAEESWKVERESLNANTAAAKSEVEKCRRQARAAAEAGMNASREALEKQRLDLQRGWAEEKGGLRRAAEDALRRAMEGNARAREEAAKKAQAAQDSLDAQVRSWKAKTETAERRAAEEREKRKGLEAGVKGALAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTERLQEEHRAALLRVHQDKKSLFEAARRKWEKEMQELRREAVAKAEDAATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRCQQQQEPSGMAPRSKQDNSTLSPLPRGSYSLRPLVSETAGARSCLDGVEAEMGSQTSPSSVLTTPSINANPGKG 907          
BLAST of mRNA_Ecto-sp13_S_contig1925.6165.1 vs. uniprot
Match: D7FKN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN2_ECTSI)

HSP 1 Score: 565 bits (1456), Expect = 8.280e-190
Identity = 353/431 (81.90%), Postives = 375/431 (87.01%), Query Frame = 0
Query:  430 MGNCSGFGERGAMARNESRQVDRHEQRQCFEHKRAG-VAHSEEXXXXXXX-GDDAQESAGRVAELSRRIAMRCXXXXXXXXXREHYHTRLFQEQLRGVRLGAQQVARRTIHNERIRQKQLLLETQERFEEKERGLVAKLERAEESWKVERESLHANTAAAKSEMEKCRRQTRAAAEAGINATKEALEKQRLDLQRGWAEEKGGLRRAAEDALRRAMEGNARAREESAVKAQTAQDSLDAQVRSWKAKAETAERRAAEEREQRRSLEAGVKGALAQEVEKAXXXXXAVLRDLRTKTETDRAKHAEEIERLQEEHRAALLRVHQDKKSLFEVARRQWEEEMQELRQEAAAKAENAATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRCQQQQGPSGMAPRSKQDNSTLSPMPRGSYSPRPLLTETA 858
            +GN SGFGERGAMAR  S+QVD+HEQ+QCFE +RAG +AHSEE      X GD+ QESAGRVAELSRRI    XXXXXXXXX     TRLFQEQLRGVRLGAQQVARRTIH+ERIRQKQLLLETQ+RFEEKE+GLVAKLE AEESWK ERESL A+TAAAK E+EKCRRQ RAAAEA  N TKEALEKQRLD QRGWAEEKGGLRRAAEDALRRAMEGN R REE+A KAQTAQDSLDAQ+RSWKAKAETAERRA EERE+RR LEAGVKG LAQEVEKAXXXXX            DRA HAEEIERLQEEHRA LLRVHQDKKSLFE ARRQWE+EMQELR+EA AKAE+AATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARR QQQQ PSGMAPRSK+DNSTLSP+PRGSYSPRPLL+E +
Sbjct:   80 VGNRSGFGERGAMARGTSQQVDQHEQQQCFEDERAGGLAHSEEEEEDGDXXGDNEQESAGRVAELSRRIXXXXXXXXXXXXXXXRSQTRLFQEQLRGVRLGAQQVARRTIHDERIRQKQLLLETQQRFEEKEKGLVAKLELAEESWKAERESLSADTAAAKCEVEKCRRQARAAAEAARNTTKEALEKQRLDFQRGWAEEKGGLRRAAEDALRRAMEGNVREREEAATKAQTAQDSLDAQLRSWKAKAETAERRATEEREKRRGLEAGVKGVLAQEVEKAXXXXXXXXXXXXXXXXXDRATHAEEIERLQEEHRAGLLRVHQDKKSLFEAARRQWEKEMQELRREAVAKAEDAATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRSQQQQEPSGMAPRSKEDNSTLSPLPRGSYSPRPLLSEVS 510          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1925.6165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JD13_9PHAE0.000e+080.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKN2_ECTSI8.280e-19081.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 752..794
NoneNo IPR availableCOILSCoilCoilcoord: 632..652
NoneNo IPR availableCOILSCoilCoilcoord: 803..823
NoneNo IPR availableCOILSCoilCoilcoord: 661..695
NoneNo IPR availableCOILSCoilCoilcoord: 552..572
NoneNo IPR availableCOILSCoilCoilcoord: 701..746

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1925contigEcto-sp13_S_contig1925:2138..11596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1925.6165.1mRNA_Ecto-sp13_S_contig1925.6165.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1925 1864..12334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1925.6165.1 ID=prot_Ecto-sp13_S_contig1925.6165.1|Name=mRNA_Ecto-sp13_S_contig1925.6165.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=894bp
MGTFCESWDSNWMDGSCDGFQNNSDDSDGGADAFEAALQPLPAWDGLAFS
TDKGNAESDIVWGTRQRARYKSAPSPSREHFPGVLDDLNLGPAEAGDCTG
NVSSTLRTTKLAGDPDRMHLSIGRAWSVTRSTSPEPKPKGHDLETGDTLT
HVIRLHRSGSVVVERKGKPNARGGIIGDAGVLRPRQHAGEKNFYPEEEQF
WQERCPREADNAVVVQQTAPTASPRVTNGRAASYDYFTAGAAHRADRPAG
KSVPPDGNGPLRGTVPGRPTGGRKTTRFEEEVNDCVQEKCATQGIHMPPP
SPRRTARIGRSARAKAITERKRNKSQRRRFPSLRDAESVLRGVLESVEDA
RSTEEDSPSAMRTPQEARSSVLRQKVADLVRDETHEERGEYSTGKHGDSI
GGTSPGKHRAQTSRQYDGDNGPSPLGICGMGNCSGFGERGAMARNESRQV
DRHEQRQCFEHKRAGVAHSEEEEEEEEEGDDAQESAGRVAELSRRIAMRC
LRIEQECLRREHYHTRLFQEQLRGVRLGAQQVARRTIHNERIRQKQLLLE
TQERFEEKERGLVAKLERAEESWKVERESLHANTAAAKSEMEKCRRQTRA
AAEAGINATKEALEKQRLDLQRGWAEEKGGLRRAAEDALRRAMEGNARAR
EESAVKAQTAQDSLDAQVRSWKAKAETAERRAAEEREQRRSLEAGVKGAL
AQEVEKAQKAQEAVLRDLRTKTETDRAKHAEEIERLQEEHRAALLRVHQD
KKSLFEVARRQWEEEMQELRQEAAAKAENAATRATAERSEALRRLRLAHD
TEMRKAGRDILRLEREARRCQQQQGPSGMAPRSKQDNSTLSPMPRGSYSP
RPLLTETAGARSCLDGVEAEMGSQTSPSSVLATPSINANPDKG*
back to top