prot_Ecto-sp13_S_contig1004.61.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1004.61.1
Unique Nameprot_Ecto-sp13_S_contig1004.61.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length748
Homology
BLAST of mRNA_Ecto-sp13_S_contig1004.61.1 vs. uniprot
Match: A0A6H5JKV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKV8_9PHAE)

HSP 1 Score: 894 bits (2310), Expect = 0.000e+0
Identity = 593/800 (74.12%), Postives = 611/800 (76.38%), Query Frame = 0
Query:    1 RKCQIRGCQRKTLFVGPADNDPAAATATATTIAGKATHCSDHWPAGFRPPPQETVPPQDGGSSLQDGQQVTHSADHRGSGTGGVNTLLGGQQAAAMGNVGETAAGGRAGKXXXXXXXXXGSSVSARPRRASGSLACRIPGCGKRATHGPPAEATRCAAHKEKGQIDHKHRLCENTTPKPCLKQPSFGWPGESRKRFCSAHRPTGTVDLRNCEQAGCGTRASHGFGKGXXXXXXXXXXXXTSLVANR------------------------------------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTRIPVACLEHSEGEMVDLKRERMRXXXXXXXXXXXXXXXXXXGTTEALVGPGVEELAGTAVAGRKRARASGGLGGNREIGRKIIDAIFTSSQLVLEAEGAATANDESEWEEGSAEDKEEEGEGEEGDRGSSMTLHMPPPPLAAPLSTSPPPTSALSPGVVPRMCPAPQAVGTVPDVATVGCTAQLEAVGEEERGQPGGERVALPGCAG-------GGVTVSSGREGGSGDGGGEGTREDG-STTRAGGERGRR-SNGSGAPSSSHSNSRCLIGCS--EDAATVTVTSVRAAAVGVTANTSSPKTMTRAMGAEVEVEAVPGRGLEGAMINQQXXXXXXXVGRQQLQPIPILEEIGIGTSLTWSCVRCGGVVPPNDRYVLVCCGYGVLHQDCTAAFVRPAIGVRPSPCPKCSRLVGSCLQVFM 747
            RKC+IRGCQRKTLFVGPADNDPAA TATATTIAG+ATHC+DHWPAGFRPPPQET PPQD GSSL DGQQ THSA+HRGSGTGG NTLLGGQQAAA+GNVGETAAGGRAGK         GSSVSARPRRASGSLACRIPGCGKRATHGPPAEATRCAAHKEKGQIDHKHRLCE+TTPKPCLKQPSFGWPGESRKRFCSAHRP GTVDLR+CEQAGCGTRASHGFGKGXXXXXXXXXXXXTSLVANR                                          P                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  TR+PVACLEHSEGEMVDLKRERMR                  GT EALV PG EELA  AVAGRKRARASGGLGGNREIGRKIIDAIFTSSQLVL+AE AA AND+SEWEEGSAEDK          RG SM+ H+PPP L APLS  PPPT  LSPG  PR CPAPQ VG VPDVA VGCTAQ EA  E ERGQP GERVAL G AG       GG TV+SGR+GGSGDGGGEG   +G STTRAGGERGRR SN SGAPSSS SN RCLIG S  EDAAT TVTSV AAAVG TANT SPK  TRA+G EV VEAVPGRGLEGAMI QQ XXXXXX     LQPIPILEEIGIGTSLTW CVRCGGVVPP+DRYVLVCCGYGVLHQ+CTA FVRPAIGVRPSPCPKCSRLVGSCLQVFM
Sbjct:    8 RKCRIRGCQRKTLFVGPADNDPAAVTATATTIAGEATHCADHWPAGFRPPPQETAPPQDCGSSLHDGQQDTHSANHRGSGTGGGNTLLGGQQAAAVGNVGETAAGGRAGKGKRKDKGIGGSSVSARPRRASGSLACRIPGCGKRATHGPPAEATRCAAHKEKGQIDHKHRLCEDTTPKPCLKQPSFGWPGESRKRFCSAHRPAGTVDLRSCEQAGCGTRASHGFGKGXXXXXXXXXXXXTSLVANRVGQRLGGGXXXXXXXXXXXXXXXXXXXXXXXXXXGHLMLIPCPCEKEGCTVSPRFGDVGGKPRFCASHKESGMVNLKDRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRVPVACLEHSEGEMVDLKRERMRMAQARKKAPAETAAAAGVGTMEALVEPGAEELAVIAVAGRKRARASGGLGGNREIGRKIIDAIFTSSQLVLDAESAAAANDDSEWEEGSAEDKXXXXXXXXXXRGPSMSFHLPPPKLPAPLSAPPPPTPTLSPGGFPRTCPAPQTVGMVPDVAAVGCTAQPEAAAEAERGQPAGERVALSGRAGEASVGAGGGATVTSGRKGGSGDGGGEGKCGEGRSTTRAGGERGRRRSNSSGAPSSSPSNFRCLIGGSAGEDAATATVTSVPAAAVGGTANTPSPKVKTRAVG-EVGVEAVPGRGLEGAMITQQQXXXXXXXXXXXLQPIPILEEIGIGTSLTWICVRCGGVVPPDDRYVLVCCGYGVLHQECTAVFVRPAIGVRPSPCPKCSRLVGSCLQVFM 806          
BLAST of mRNA_Ecto-sp13_S_contig1004.61.1 vs. uniprot
Match: D8LRL1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL1_ECTSI)

HSP 1 Score: 711 bits (1836), Expect = 4.490e-232
Identity = 551/646 (85.29%), Postives = 562/646 (87.00%), Query Frame = 0
Query:    1 RKCQIRGCQRKTLFVGPADNDPAAATATATTIAGKATHCSDHWPAGFRPPPQETVPPQDGGSSLQDGQQVTHSADHRGSGTGGVNTLLGGQQAAAMGNVGETAAGGRAGKXXXXXXXXXG--SSVSARPRRASGSLACRIPGCGKRATHGPPAEATRCAAHKEKGQIDHKHRLCENTTPKPCLKQPSFGWPGESRKRFCSAHRPTGTVDLRNCEQAGCGTRASHGFGKGXXXXXXXXXXXXTSLVANRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTRIPVACLEHSEGEMVDLKRERMRXXXXXXXXXXXXXXXXXXGTTEALVGPGVEELAGTAVAGRKRARASGGLGGNREIGRKIIDAIFTSSQLVLEAEGAATANDESEWEEGSAEDKEEEGEGEEGDRGSSMTLHMPPPPLAAPLSTSPPPTSALSPGVVPRMCPAPQAVGTVPDVATVGCTAQLEAVGEEERGQPGGERVALPGCAG-------GGVTVSSGREGGSGDGGGEGTREDGSTTRAGGERG--RRSNGSGAPSSSHSNSRCLIGCS--EDAATVTVTSVRAAAVGVTANTSSPKTMTR 633
            RKC+IRGCQRKTLFVGPADNDPAAATATATTIAG+ATHC+DHWPAGFRPPPQETV PQDGGSSLQDGQQVTHSADHRGSGTGG NTLLG QQAAA+GNVGETAAGGRAGKXXXXXXXXX   SSVSARPRRASGSLACRIPGCGKRATHGPPAEATRCAAHKEKGQIDHKHRLCENTTPKPCLKQPSFGWPGESRKRFCSAHRP GTVDLRNCEQAGCGTRASHGFGKGXXXXXXXXXXXXTSLVANRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTR+PVACLEHSEGEMVDLKRERM XXXXXXXXXXXXXXXX   T EALV  G  ELAGT VAGRKRARASGGLGGNREIGRKI+DAIFTSSQLVLEAEGAA ANDESEWEEGSAEDK        GDRG  M+ H+PPP L APLS  PPPT ALSPGVVPR CPAPQAVG VPDVA VGC AQ EAV EEERGQP GERVAL GCAG       GG TV+SGREGGSGDG                     RRS+  GA SSS SNSRCLIG S  EDAAT TVTSV AAAVG TANT SPK  T+
Sbjct:    8 RKCRIRGCQRKTLFVGPADNDPAAATATATTIAGEATHCADHWPAGFRPPPQETVLPQDGGSSLQDGQQVTHSADHRGSGTGGGNTLLGRQQAAAVGNVGETAAGGRAGKXXXXXXXXXXXXSSVSARPRRASGSLACRIPGCGKRATHGPPAEATRCAAHKEKGQIDHKHRLCENTTPKPCLKQPSFGWPGESRKRFCSAHRPAGTVDLRNCEQAGCGTRASHGFGKGXXXXXXXXXXXXTSLVANRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTRVPVACLEHSEGEMVDLKRERMXXXXXXXXXXXXXXXXXGARTMEALVEQGAAELAGTTVAGRKRARASGGLGGNREIGRKIMDAIFTSSQLVLEAEGAAAANDESEWEEGSAEDKXXXXXXXXGDRGPGMSFHLPPPKLPAPLSAPPPPTPALSPGVVPRTCPAPQAVGMVPDVAAVGCAAQPEAVAEEERGQPAGERVALSGCAGEASVGAGGGATVTSGREGGSGDGXXXXXXXXXXXXXXXXXXXGRRRSSSRGAQSSSPSNSRCLIGVSAGEDAATATVTSVPAAAVGGTANTPSPKMGTK 653          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1004.61.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKV8_9PHAE0.000e+074.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRL1_ECTSI4.490e-23285.29EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1004contigEcto-sp13_S_contig1004:9331..12399 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1004.61.1mRNA_Ecto-sp13_S_contig1004.61.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1004 9331..12399 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1004.61.1 ID=prot_Ecto-sp13_S_contig1004.61.1|Name=mRNA_Ecto-sp13_S_contig1004.61.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=748bp
RKCQIRGCQRKTLFVGPADNDPAAATATATTIAGKATHCSDHWPAGFRPP
PQETVPPQDGGSSLQDGQQVTHSADHRGSGTGGVNTLLGGQQAAAMGNVG
ETAAGGRAGKGKGKDKGNGGSSVSARPRRASGSLACRIPGCGKRATHGPP
AEATRCAAHKEKGQIDHKHRLCENTTPKPCLKQPSFGWPGESRKRFCSAH
RPTGTVDLRNCEQAGCGTRASHGFGKGRARFCALHSPPGTSLVANRPCEK
EGCTVSPRFGDVGGKPRFCASHKEKGMVNLKDRRCEQHPCTIQPTFAFPG
EKPRFCSKHKAEGHVNVRHKLCRHPQCKLVPTYGMRGTRIPVACLEHSEG
EMVDLKRERMRMAQARKKAPAETAAAAGAGTTEALVGPGVEELAGTAVAG
RKRARASGGLGGNREIGRKIIDAIFTSSQLVLEAEGAATANDESEWEEGS
AEDKEEEGEGEEGDRGSSMTLHMPPPPLAAPLSTSPPPTSALSPGVVPRM
CPAPQAVGTVPDVATVGCTAQLEAVGEEERGQPGGERVALPGCAGGGVTV
SSGREGGSGDGGGEGTREDGSTTRAGGERGRRSNGSGAPSSSHSNSRCLI
GCSEDAATVTVTSVRAAAVGVTANTSSPKTMTRAMGAEVEVEAVPGRGLE
GAMINQQQQQQQQQVGRQQLQPIPILEEIGIGTSLTWSCVRCGGVVPPND
RYVLVCCGYGVLHQDCTAAFVRPAIGVRPSPCPKCSRLVGSCLQVFM*
back to top