mRNA_Ecto-sp13_S_contig19155.6113.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19155.6113.1
Unique NamemRNA_Ecto-sp13_S_contig19155.6113.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: D7FWD7_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD7_ECTSI)

HSP 1 Score: 671 bits (1730), Expect = 1.250e-235
Identity = 371/395 (93.92%), Postives = 380/395 (96.20%), Query Frame = 1
Query:    1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALDMRNAKDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREWRSSTVLVREPVDHRNKSSVWLEDAEEGGEEAGTGGEWEGGCFKSILSRKQDAAGQHASASDGVPSALFL 1185
            CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXX  VATDLVRVVDGD S KDAR+LKGRLSR  AFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQ+FLN LTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALD+R+AKDLQKADRDRL NLQPLGDLWEAYKPSRYYYEIIEYVRRI+LTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREWRSSTV  REPVD R+KSS WLEDAEEGGEEAGTGGEWEGGCF+SILS KQDAAGQ+ SAS+GVPSAL L
Sbjct:  387 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXAVVATDLVRVVDGDRSIKDARTLKGRLSRFQAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNVLTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALDLRHAKDLQKADRDRLPNLQPLGDLWEAYKPSRYYYEIIEYVRRIMLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREWRSSTVSEREPVDPRSKSSGWLEDAEEGGEEAGTGGEWEGGCFQSILSSKQDAAGQNVSASNGVPSALLL 781          
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE)

HSP 1 Score: 512 bits (1318), Expect = 3.240e-170
Identity = 305/411 (74.21%), Postives = 316/411 (76.89%), Query Frame = 1
Query:    1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALDMR-----------------------------------------------------------------------------NAKDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREWRSSTVLVR 1002
            CSVCADGYAPGTAYQCHECSGTSMGSAVG+A XXXXXXXXXX  VA DLVRVVDGD S KDAR+LKGRLSR HAFVV AFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQ+FLNALTPVNLDIGFILSYSC V TDFFDRLLIATIGPVVVLALLALTFVVGRKRNI+SEAAVRA+  +                                                                             N +DLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQ+AVVLLLAVVFLFISESLSPF KKIDMALYRWGNGV+LAS+YVALLLKVNVSEEGSETLSAFVVVLILANV M IT+VVQSFLLVREWRSSTV  R
Sbjct:  628 CSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVDGDDSIKDARTLKGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFLLVREWRSSTVSAR 1038          
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 1.090e-69
Identity = 160/409 (39.12%), Postives = 217/409 (53.06%), Query Frame = 1
Query:    1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVD------GDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALDMR-----------------------------------------------------------------------------NAKDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREW 978
            C+VCA GY+PG +  C  C G S  SA+  AA            + + LV VV+             ++  +   S L A V    PLT VKIVVV WQI+TQ+  +AG  YP  YQ+FL+ +  VNLD+GFILS++C   T+F+DRLL+ATIGPV+VL LL  T+VV R+RN + E A+R +  R                                                                             N  +L++ DR+  A L+P  DLWE YKPS YYYE++E  RRI LTG AVF+ P SSAQ+A+VLLLA VF+ +SE LSPFA+ ++M LYR G+ V+ ASMY+ALLL+V+VS+E  ++   F  V+++A+V M + VVVQ  L+   W
Sbjct:  611 CAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLLIFVGW 1019          
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 2.750e-69
Identity = 157/404 (38.86%), Postives = 217/404 (53.71%), Query Frame = 1
Query:    1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVD-GDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALDMR-----------------------------------------------------------------------------NAKDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREW 978
            C+VC+ GY+PG +  C  C G S  SA+  AA            + + LV VV+ G    + ++  +   S   A V    PLT VKIVVV WQI+TQ+  +AG  YP  YQ+FL+ +  VNLD+GFILS++C   T+F+DRLL+ATIGPV+VL LL  T++V R+RN + E A+R +  R                                                                             N  +L++ DR+  A L+P  DLWE YKPS YYYE++E  RRI LTG AVF+ P SSAQ+A+VLLLA VF+ +SE LSPFA+ ++M LYR G+ V+ ASMY+ALLL+V+VS+E  ++   F  V+++A+V M + VV Q  L+   W
Sbjct:  635 CAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQEDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLLIFVGW 1038          
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 1.340e-62
Identity = 153/409 (37.41%), Postives = 212/409 (51.83%), Query Frame = 1
Query:    1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRA--------------------------------LD---------------------------------------------MRNAKDLQKADRD--------RLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVR 972
            C+VC +GYA G  + C  C G ++ SA+G +             V  DLVRVVD +     A +   RL+     +V A PLT++KIVVVAWQI+TQF ++   VYP+ Y++FL  L  VN D+GF+LS SC V  +F+ RL   T+GP+VV   LA T+ + R RN +S A ++A                                LD                                             + N  DL K            RL +LQP+ DLW +YKP RYY+E++E  RRI LTG+A F+LP S+AQ+A+ ++LA +F+ +S+ LSPFA   D  LYR G  +I  SMY+ALLLKV+ S+E S++ +AF  VLI A+V MV+ V+VQ+ L VR
Sbjct:  657 CAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVD-EVEPDTASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPRLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSVR 1064          
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 4.150e-62
Identity = 146/392 (37.24%), Postives = 211/392 (53.83%), Query Frame = 1
Query:    1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFV---VGRKRNIN--------------------------------------------SEAAVRALD-------------------MRNAKDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREW 978
            C+VC  G++PG  + C  C G S   A  + +            +A  LV VV+   S+K     + + S   A +    PLT +KIVVV WQI+TQ+  +AG  YP  Y++FL+ +  VNLD+GFILS +C   TDF+DRLL+ TI P VVL LL  T++   V + R+++                                            +  A R                       ++  +L++  R+R A L+P  DLWE YKPS YYYE++E  RRI LTG AVF+ P SSAQ+A+VLLLA+VF+ +SE LSPFA+ ++M LYR G+ V+ ASMY+ALLL+V+VS+E +++   F  VL++A+  M++ VV+Q  L+   W
Sbjct:  641 CAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYLAMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRAVLKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLLIFAGW 1032          
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 2.630e-58
Identity = 141/365 (38.63%), Postives = 191/365 (52.33%), Query Frame = 1
Query:  133 VATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRA--------------------------------LD---------------------------------------------MRNAKDLQKADRD--------RLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVR 972
            V  +LVRVVD D +T    +    L+ L   + N  PLT++KIV+VAWQI+TQF ++   VYP+ Y+ FL+ L  VN + GFILS SC V T+F+ RLL ATIGP+VVL  LALT+ V R RN +S A ++                                 LD                                             + N  DL K D +         L NLQP+ DLW  YKP RYY+E++E  RRI LTG+AVF+ PGS+AQ+A+ ++ A  F+ IS+ LSPFA  +D  LYR G  VI  SM++ LLLKV+ S+E S++   F  +LI A+V MV+ + VQ+ L V+
Sbjct:   25 VIANLVRVVDDD-NTGTVSACGKTLNSLRNRIANGIPLTSIKIVLVAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLSVK 388          
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 4.540e-50
Identity = 143/432 (33.10%), Postives = 200/432 (46.30%), Query Frame = 1
Query:  133 VATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVR-ALDMR----------------------------------------------------------------------------NAKDL---QKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVR----EWRSSTVLVREPVDHRNKSSVWLEDAEEGGEE--AGTGGEWEGGCFKSILSRK-QDAAGQHASASDGV 1167
            V  DLVRVVD    TK       R       +  A PLT +KI++V WQI+TQF ++    YPE Y+ FL AL  VN ++G+ LS+ C V T+F+ RL  +TI P+ +L  LA    + ++ N +S+  +R A D                                                                              N KDL   +        NL+P+ DLWE YKP RY+YE++E  RRIVLTG+AVF+ PG++AQ+A+ +  A   L + E L+PF   +D  LYR G  V+  SMY+ALLLKV+ S+E SE+   F  VL+ A+V MV+ V++ S L  +    E     V VR+    RN  S W      G EE    +G  WE     + L+ + Q+   +   ASDG 
Sbjct:    4 VIVDLVRVVDDGDGTKSRVGKWERFLSCRDAIAAAIPLTAIKIILVVWQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGYFLSFLCLVETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVQDRSGGTTTPENLRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSSLLSAKKVGIEAMRKQVEVRDVPVARNTRSSWRASETLGAEEEPGESGDNWEPRLGLAALTEQPQEYQNEGNGASDGT 435          
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 1.740e-49
Identity = 135/401 (33.67%), Postives = 197/401 (49.13%), Query Frame = 1
Query:    1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRN------------------------------------------INSEAAVRA-----LDMRNAKDLQK--------------------------------ADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLL 966
            CS+C+DGY  G +++C ECS ++ G  + LA+            V + +V    G+GS       +G + RL  ++    PL + KIVVV+WQI+TQF A+A   YP+ YQ FL+ L   N D+ ++LS  C V  DF DRLLI+TIGP+V L  L  T+    + N                                           + E  +RA      D    K LQ                                 ADR+  A +    +LW+ YKPS +YYE+IE  RR++L GV VF+ P ++ QIA+ LL+A  F+ +SE L+P+A + D  L R G+ V+  SMYVALLLKV+VS E  E+   F VVL+ A+  M++ +V+++ +L
Sbjct: 1656 CSICSDGYTAGLSFKCSECSDSAGG--IILASFLAVVALLVAVAVVSYVVSDKVGEGS-------RGTVERLGRYI----PLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVL 2043          
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.420e-48
Identity = 134/407 (32.92%), Postives = 200/407 (49.14%), Query Frame = 1
Query:    1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRAL------------------------------DMRNAKDLQKAD--------------------------------------------------RDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREWR 981
            CSVC++GY+   A+ C EC    +    G+A             +A  +  V    G  + AR  +G + R    VV   PL ++KIVVV WQI+TQF ++A   YP+ YQ FL+ +  +N D+ +I S  C V  DF  RLL+ATIGP+V LALLA+T+ V ++R+  SEAA++ +                              D+ + K   +AD                                                  R     +QP+ DLW  YKP R+YYE+IE VRR+ LTGV VF+ P ++AQ+AV L++A  F+  S  L+P+  K D ++   G+ ++  SMY ALL KV+VS+E +++   F  VL+ A+  MV+ VVV++ ++   WR
Sbjct: 1364 CSVCSEGYSMSLAFTCTEC----VDDHGGIAIMVVVGVFVLGAAIALCMHLV---SGEMEGAR--RGVIHR----VVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYSWR 1757          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD7_ECTSI1.250e-23593.92Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JSF5_9PHAE3.240e-17074.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L324_9PHAE1.090e-6939.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT9_ECTSI2.750e-6938.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWI3_9PHAE1.340e-6237.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTU5_ECTSI4.150e-6237.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FPF7_ECTSI2.630e-5838.63Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
A0A6H5KHA3_9PHAE4.540e-5033.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5Y7_ECTSI1.740e-4933.67Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5JY65_9PHAE1.420e-4832.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19155contigEcto-sp13_S_contig19155:98..1785 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score248.4
Seed ortholog evalue5.4e-63
Seed eggNOG ortholog2880.D7FTT9
Model size1188
Hectar predicted targeting categorysignal anchor
Exons4
EggNOG OGs2BFIX@1,2S176@2759
Cds size1188
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462975.8291874-CDS-Ecto-sp13_S_contig19155:97..3881681462975.8291874-CDS-Ecto-sp13_S_contig19155:97..388Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19155 98..388 +
1681462975.8404312-CDS-Ecto-sp13_S_contig19155:657..8941681462975.8404312-CDS-Ecto-sp13_S_contig19155:657..894Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19155 658..894 +
1681462975.8503566-CDS-Ecto-sp13_S_contig19155:1028..10491681462975.8503566-CDS-Ecto-sp13_S_contig19155:1028..1049Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19155 1029..1049 +
1681462975.8625574-CDS-Ecto-sp13_S_contig19155:1146..17851681462975.8625574-CDS-Ecto-sp13_S_contig19155:1146..1785Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19155 1147..1785 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19155.6113.1prot_Ecto-sp13_S_contig19155.6113.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19155 98..1785 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19155.6113.1

>prot_Ecto-sp13_S_contig19155.6113.1 ID=prot_Ecto-sp13_S_contig19155.6113.1|Name=mRNA_Ecto-sp13_S_contig19155.6113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=396bp
CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAAVVAVVLLVVVVVATDLV
RVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGA
IAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPV
VVLALLALTFVVGRKRNINSEAAVRALDMRNAKDLQKADRDRLANLQPLG
DLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFL
FISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAF
VVVLILANVFMVITVVVQSFLLVREWRSSTVLVREPVDHRNKSSVWLEDA
EEGGEEAGTGGEWEGGCFKSILSRKQDAAGQHASASDGVPSALFL*
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mRNA from alignment at Ecto-sp13_S_contig19155:98..1785+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19155.6113.1 ID=mRNA_Ecto-sp13_S_contig19155.6113.1|Name=mRNA_Ecto-sp13_S_contig19155.6113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1688bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19155:98..1785+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGCTCGGTGTGTGCGGACGGCTACGCGCCAGGCACGGCGTACCAGTGTCA CGAATGCTCGGGAACAAGCATGGGGTCAGCCGTGGGGCTTGCAGCAGCGG TGGTGGCGGTGGTTCTGCTCGTGGTTGTAGTGGTTGCTACGGACCTCGTA CGCGTTGTGGATGGCGACGGAAGCACCAAAGACGCCCGCAGTCTGAAGGG ACGACTTTCGCGTCTCCATGCGTTCGTTGTGAACGCTTTCCCCCTGACGA CCGTGAAGATCGTCGTGGTGGCCTGGCAGATAATCACACAGGTGGGGTGC TGATTGCCTCATACACCAAGTGGGTTGGTTTTTTCTTCTCGGTCTCTGTG CAGCGGAATGGAACCTGTTTGGCTTTCCTCGGACGTGGAGCAATCTTTTC TCTCCAGATCTTGGTATCTATTGTTTATGAAACTTGACCACCGGGCAGCA GCAGCTGGAAGATGTGGAAGCACGCTCAACACGTTAATGGTTTTTCTCTC CGCCCCTACCCAATCTCGCCCTTGATGCGCCCGCAACCTGTTCCGCGACA ATTCCGGCAGTTCGGCGCGATCGCTGGCTTCGTGTACCCGGAGGAGTACC AGAACTTTCTCAACGCCCTGACGCCTGTTAATCTGGACATCGGCTTCATC TTGTCGTACTCGTGCTTCGTGACCACCGATTTTTTCGACCGGTTGCTGAT CGCCACAATCGGGCCAGTCGTGGTGCTCGCGCTGCTGGCCTTGACGTTCG TCGTCGGGAGGAAACGGAACATCAACTCCGAGGCCGCCGTTCGCGCGGTG AAGAGCAAGCACCTCTCCGCGGCGCTGTTCGTGATGTTCTTCATCTACTC CTCGGTCTCGTTCACGGTGTTTCTGACGTTTGTCTGCGACACCCTCGACG ACGGGGTCTCGTACCTGCGGGCTGACTACAGCTTGACATGCGAAACGCCA AGGTACGGCGCCTTTCGCGGGTACGCGGCCCTCATGGTATGCGTCTACCC TATCGGCATCCCGGCAACGTTTGCCTGGTTGCTGGGGCGCAACCGGCAGG ACCTGCAGAAGGCGGACCGGGACAGACTGGCGAATCTTCAGCCGCTCGGC GATCTCTGGGAGGCGTACAAGCCGTCGAGGTACTACTACGAAATCATCGA GTACGTTCGCCGCATCGTGCTCACTGGGGTCGCAGTTTTTGTTCTCCCCG GCAGCTCGGCGCAAATCGCTGTCGTTCTCTTGCTGGCCGTCGTGTTTTTG TTCATCTCCGAGTCGCTGTCCCCCTTCGCAAAGAAGATCGACATGGCTCT GTACCGCTGGGGGAACGGCGTTATCTTGGCCAGCATGTACGTTGCTCTCC TGCTCAAAGTGAACGTGTCCGAAGAGGGAAGCGAGACTCTCTCAGCCTTC GTGGTCGTTCTCATATTGGCGAACGTCTTCATGGTCATTACCGTGGTGGT GCAGTCCTTCTTGCTGGTAAGAGAGTGGCGGTCGTCCACGGTGTTAGTGC GGGAGCCGGTTGACCATCGAAACAAATCATCTGTATGGCTGGAAGACGCC GAAGAGGGTGGCGAGGAAGCAGGAACGGGCGGGGAGTGGGAGGGCGGATG CTTCAAGTCCATCCTGTCTAGAAAGCAAGATGCTGCGGGACAACACGCAT CTGCGAGCGATGGTGTACCCAGCGCATTGTTTTTGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19155:98..1785+

>mRNA_Ecto-sp13_S_contig19155.6113.1 ID=mRNA_Ecto-sp13_S_contig19155.6113.1|Name=mRNA_Ecto-sp13_S_contig19155.6113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1188bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19155:98..1785+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGCTCGGTGTGTGCGGACGGCTACGCGCCAGGCACGGCGTACCAGTGTCA
CGAATGCTCGGGAACAAGCATGGGGTCAGCCGTGGGGCTTGCAGCAGCGG
TGGTGGCGGTGGTTCTGCTCGTGGTTGTAGTGGTTGCTACGGACCTCGTA
CGCGTTGTGGATGGCGACGGAAGCACCAAAGACGCCCGCAGTCTGAAGGG
ACGACTTTCGCGTCTCCATGCGTTCGTTGTGAACGCTTTCCCCCTGACGA
CCGTGAAGATCGTCGTGGTGGCCTGGCAGATAATCACACAGTTCGGCGCG
ATCGCTGGCTTCGTGTACCCGGAGGAGTACCAGAACTTTCTCAACGCCCT
GACGCCTGTTAATCTGGACATCGGCTTCATCTTGTCGTACTCGTGCTTCG
TGACCACCGATTTTTTCGACCGGTTGCTGATCGCCACAATCGGGCCAGTC
GTGGTGCTCGCGCTGCTGGCCTTGACGTTCGTCGTCGGGAGGAAACGGAA
CATCAACTCCGAGGCCGCCGTTCGCGCGCTTGACATGCGAAACGCCAAGG
ACCTGCAGAAGGCGGACCGGGACAGACTGGCGAATCTTCAGCCGCTCGGC
GATCTCTGGGAGGCGTACAAGCCGTCGAGGTACTACTACGAAATCATCGA
GTACGTTCGCCGCATCGTGCTCACTGGGGTCGCAGTTTTTGTTCTCCCCG
GCAGCTCGGCGCAAATCGCTGTCGTTCTCTTGCTGGCCGTCGTGTTTTTG
TTCATCTCCGAGTCGCTGTCCCCCTTCGCAAAGAAGATCGACATGGCTCT
GTACCGCTGGGGGAACGGCGTTATCTTGGCCAGCATGTACGTTGCTCTCC
TGCTCAAAGTGAACGTGTCCGAAGAGGGAAGCGAGACTCTCTCAGCCTTC
GTGGTCGTTCTCATATTGGCGAACGTCTTCATGGTCATTACCGTGGTGGT
GCAGTCCTTCTTGCTGGTAAGAGAGTGGCGGTCGTCCACGGTGTTAGTGC
GGGAGCCGGTTGACCATCGAAACAAATCATCTGTATGGCTGGAAGACGCC
GAAGAGGGTGGCGAGGAAGCAGGAACGGGCGGGGAGTGGGAGGGCGGATG
CTTCAAGTCCATCCTGTCTAGAAAGCAAGATGCTGCGGGACAACACGCAT
CTGCGAGCGATGGTGTACCCAGCGCATTGTTTTTGTAG
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